EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YNL022C (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 1473
Position: chrXIV:591427-592899
Accession: S000004967
RBP type: canonical RBP
Summary: rRNA m5C methyltransferase%3B methylates cytosine at position 2278 of 25S rRNA while Nop2p methylates cytosine at position 2870%3B contains seven beta-strand methyltransferase motif%3B localized to the nucleolus%3B interacts with Trm112p%3B homolog of NSUN5A%2C a human gene which is deleted in Williams-Beuren Syndrome

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YNL022C_mRNA	Methyltr_RsmB-F	PF01189.17	5.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YNL022C_mRNA	-	1473	-	YNL022C_mRNA	490 (aa)	-	P53972

Gene Model

Click here to download YNL022C's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YNL022C's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YNL022C	-	91	30.989	ENSACIG00000001153	nsun5	62	33.623	Amphilophus_citrinellus
YNL022C	-	59	34.483	ENSAPLG00000008049	NSUN5	84	34.483	Anas_platyrhynchos
YNL022C	-	99	30.505	ENSACAG00000000193	NSUN5	92	30.181	Anolis_carolinensis
YNL022C	-	69	31.778	WBGene00013151	nsun-5	94	32.063	Caenorhabditis_elegans
YNL022C	-	77	30.848	ENSCAPG00000013989	NSUN5	86	30.848	Cavia_aperea
YNL022C	-	82	32.020	ENSCPBG00000009699	NSUN5	79	32.208	Chrysemys_picta_bellii
YNL022C	-	91	34.076	ENSCING00000023888	-	91	32.743	Ciona_intestinalis
YNL022C	-	99	31.084	ENSCSAVG00000006814	-	92	31.544	Ciona_savignyi
YNL022C	-	70	31.519	ENSDARG00000043209	nsun5	86	31.232	Danio_rerio
YNL022C	-	76	42.609	ENSEBUG00000006181	nsun5	81	42.609	Eptatretus_burgeri
YNL022C	-	82	31.281	ENSGAGG00000017057	NSUN5	79	31.429	Gopherus_agassizii
YNL022C	-	89	30.455	ENSSTOG00000015023	NSUN5	88	30.000	Ictidomys_tridecemlineatus
YNL022C	-	99	30.444	ENSKMAG00000011806	nsun5	98	30.181	Kryptolebias_marmoratus
YNL022C	-	99	30.986	ENSLACG00000018926	NSUN5	89	30.181	Latimeria_chalumnae
YNL022C	-	60	33.106	ENSMGAG00000001654	NSUN5	84	31.471	Meleagris_gallopavo
YNL022C	-	91	31.441	ENSMMOG00000021664	nsun5	86	34.062	Mola_mola
YNL022C	-	99	30.321	ENSMODG00000013753	NSUN5	93	30.120	Monodelphis_domestica
YNL022C	-	60	33.447	ENSNLEG00000015518	-	60	33.447	Nomascus_leucogenys
YNL022C	-	70	30.659	ENSPPAG00000037296	NSUN5	75	30.946	Pan_paniscus
YNL022C	-	69	30.725	ENSPMGG00000000744	nsun5	90	30.145	Periophthalmus_magnuspinnatus
YNL022C	-	99	30.567	ENSPCIG00000023276	NSUN5	93	30.364	Phascolarctos_cinereus
YNL022C	-	98	30.266	ENSPREG00000000892	nsun5	73	32.203	Poecilia_reticulata
YNL022C	-	62	31.270	ENSPPYG00000017479	-	86	31.270	Pongo_abelii
YNL022C	-	71	32.303	ENSSBOG00000028211	NSUN5	91	32.584	Saimiri_boliviensis_boliviensis
YNL022C	-	77	32.031	ENSSPUG00000000580	NSUN5	89	31.830	Sphenodon_punctatus
YNL022C	-	94	31.224	ENSSPAG00000002242	nsun5	81	30.802	Stegastes_partitus
YNL022C	-	76	30.026	ENSUAMG00000016585	NSUN5	68	30.548	Ursus_americanus