EuRBPDB

Description

Ensembl ID: YNL040W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 1371
Position: chrXIV:553380-554750
Accession: S000004985
RBP type: canonical RBP
Summary: Protein of unknown function%3B has strong similarity to alanyl-tRNA synthases from Eubacteria%3B null mutant displays decreased translation rate and increased readthrough of premature stop codons%3B green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm%3B YNL040W is not an essential gene

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YNL040W_mRNA	tRNA_SAD	PF07973.14	2.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YNL040W_mRNA	-	1371	-	YNL040W_mRNA	456 (aa)	-	P53960

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YNL040W	-	82	45.614	ENSMICG00000014185	-	98	45.614	Microcebus_murinus
YNL040W	-	59	32.000	ENSODEG00000018082	-	62	32.000	Octodon_degus
YNL040W	-	55	32.959	ENSPMGG00000004258	aarsd1	99	32.959	Periophthalmus_magnuspinnatus
YNL040W	-	96	30.222	ENSPMAG00000002529	aarsd1	91	30.048	Petromyzon_marinus
YNL040W	-	59	32.847	ENSRROG00000030505	-	79	30.794	Rhinopithecus_roxellana
YNL040W	-	53	30.924	ENSTRUG00000016572	aarsd1	94	30.924	Takifugu_rubripes
YNL040W	-	72	48.980	ENSVPAG00000002571	-	55	48.980	Vicugna_pacos
YNL040W	-	53	35.178	ENSXETG00000013644	aarsd1	96	35.178	Xenopus_tropicalis