EuRBPDB

Description

Ensembl ID: YNL062C (Gene tree)
Gene ID: -
Gene Symbol: GCD10
Alias: TRM6
Full Name: Subunit of tRNA (1-methyladenosine) methyltransferase with Gcd14p%3B required for the modification of the adenine at position 58 in tRNAs%2C especially tRNAi-Met%3B first identified as a negative regulator of GCN4 expression
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 1437 bases
Position: chrXIV:508776-510212
Accession: S000005006
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YNL062C_mRNA	Gcd10p	PF04189.13	2.9e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YNL062C_mRNA	-	1437	-	YNL062C_mRNA	478 (aa)	-	P41814

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YNL062C	GCD10	51	38.824	ENSACAG00000000575	TRMT6	50	38.824	Anolis_carolinensis
YNL062C	GCD10	51	31.356	ENSCSEG00000002228	trmt6	55	31.356	Cynoglossus_semilaevis
YNL062C	GCD10	77	30.597	ENSDORG00000006458	Trmt6	74	31.667	Dipodomys_ordii
YNL062C	GCD10	50	31.818	ENSFALG00000013575	TRMT6	66	31.613	Ficedula_albicollis
YNL062C	GCD10	51	40.000	ENSGALG00000009169	TRMT6	53	40.000	Gallus_gallus
YNL062C	GCD10	63	30.065	ENSGAGG00000008464	TRMT6	66	32.680	Gopherus_agassizii
YNL062C	GCD10	50	34.118	ENSMMOG00000004412	trmt6	53	34.118	Mola_mola
YNL062C	GCD10	55	36.154	MGP_SPRETEiJ_G0025264	Trmt6	53	36.154	Mus_spretus
YNL062C	GCD10	51	35.294	ENSSFOG00015008429	trmt6	50	35.294	Scleropages_formosus
YNL062C	GCD10	74	35.000	ENSXETG00000004501	trmt6	63	35.000	Xenopus_tropicalis