EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
YNL069C (Gene tree)
Gene ID
-
Gene Symbol
RPL16B
Alias
RP23
Full Name
-
Gene Type
protein_coding
Species
Saccharomyces_cerevisiae
Status
confidence
Strand
Minus strand
Length
1046
Position
chrXIV:493956-495001
Accession
S000005013
RBP type
canonical RBP
Summary
Ribosomal 60S subunit protein L16B%3B N-terminally acetylated%2C binds 5.8 S rRNA%3B transcriptionally regulated by Rap1p%3B homologous to mammalian ribosomal protein L13A and bacterial L13%3B RPL16B has a paralog%2C RPL16A%2C that arose from the whole genome duplication
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
YNL069C_mRNARibosomal_L13PF00572.181.6e-1211
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26632259The RNA-binding proteomes from yeast to man harbour conserved enigmRBPsRIC.PAR_CL & yeast2015 Dec 3Beckmann BMDOI: 10.1038/ncomms10127
25173706Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteinsRNPxl & yeast2014 Aug 31Kramer KDOI: 10.1038/nmeth.3092
26595419Conserved mRNA-binding proteomes in eukaryotic organismsmRBPome & yeast2015 Nov 23Matia Gonzalez AMDOI: 10.1038/nsmb.3128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
YNL069C_mRNA-597-YNL069C_mRNA198 (aa)-P26785
Gene Model
Click here to download YNL069C's gene model file
Protein-Protein Interaction (PPI)

Clik here to download YNL069C's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
YNL069CRPL16B9990.306YIL133CRPL16A9890.306
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
YNL069CRPL16B9756.771ENSG00000142541RPL13A8461.404Homo_sapiens
YNL069CRPL16B9556.995ENSAPOG00000014084rpl13a8360.819Acanthochromis_polyacanthus
YNL069CRPL16B9756.771ENSAMEG00000014027RPL13A8461.404Ailuropoda_melanoleuca
YNL069CRPL16B9458.824ENSACIG00000004871rpl13a9358.289Amphilophus_citrinellus
YNL069CRPL16B9556.477ENSAOCG00000002123rpl13a8261.310Amphiprion_ocellaris
YNL069CRPL16B9556.477ENSAPEG00000018777rpl13a8261.310Amphiprion_percula
YNL069CRPL16B9557.513ENSATEG00000012828rpl13a9157.754Anabas_testudineus
YNL069CRPL16B9758.081ENSACAG00000017279RPL13A8762.500Anolis_carolinensis
YNL069CRPL16B9756.771ENSANAG00000030530RPL13A8461.404Aotus_nancymaae
YNL069CRPL16B8654.118ENSANAG00000021423-8656.154Aotus_nancymaae
YNL069CRPL16B5760.714ENSANAG00000013769-7960.714Aotus_nancymaae
YNL069CRPL16B5554.128ENSANAG00000037443-7754.128Aotus_nancymaae
YNL069CRPL16B9749.741ENSANAG00000020868-8353.488Aotus_nancymaae
YNL069CRPL16B9556.995ENSACLG00000016552rpl13a9157.219Astatotilapia_calliptera
YNL069CRPL16B8958.757ENSAMXG00000033532rpl13a8360.234Astyanax_mexicanus
YNL069CRPL16B9757.292ENSBTAG00000005296RPL13A9256.771Bos_taurus
YNL069CRPL16B10048.000WBGene00004428rpl-168651.429Caenorhabditis_elegans
YNL069CRPL16B9257.143ENSCJAG00000046649-8459.649Callithrix_jacchus
YNL069CRPL16B7161.702ENSCJAG00000008837-8061.702Callithrix_jacchus
YNL069CRPL16B9755.208ENSCJAG00000040678-8459.649Callithrix_jacchus
YNL069CRPL16B9756.771ENSCJAG00000000072-8461.404Callithrix_jacchus
YNL069CRPL16B9756.771ENSCAFG00000029892RPL13A8461.404Canis_familiaris
YNL069CRPL16B7942.949ENSCAFG00000003946-7842.949Canis_familiaris
YNL069CRPL16B9756.771ENSCAFG00020024917-8461.404Canis_lupus_dingo
YNL069CRPL16B9757.292ENSCHIG00000021732-9456.771Capra_hircus
YNL069CRPL16B9755.729ENSCHIG00000012581-9255.208Capra_hircus
YNL069CRPL16B9757.292ENSTSYG00000008791-9256.771Carlito_syrichta
YNL069CRPL16B8846.552ENSTSYG00000028115-8546.552Carlito_syrichta
YNL069CRPL16B9757.292ENSCAPG00000007267RPL13A9456.771Cavia_aperea
YNL069CRPL16B6364.000ENSCPOG00000023083-5763.566Cavia_porcellus
YNL069CRPL16B9757.292ENSCPOG00000012417RPL13A8664.035Cavia_porcellus
YNL069CRPL16B9756.771ENSCCAG00000022898RPL13A8461.404Cebus_capucinus
YNL069CRPL16B6865.672ENSCCAG00000029220-9265.672Cebus_capucinus
YNL069CRPL16B6860.448ENSCCAG00000020555-9660.448Cebus_capucinus
YNL069CRPL16B9354.891ENSCCAG00000034479-7765.079Cebus_capucinus
YNL069CRPL16B9756.771ENSCATG00000011576RPL13A8461.404Cercocebus_atys
YNL069CRPL16B9756.771ENSCLAG00000012323RPL13A8663.158Chinchilla_lanigera
YNL069CRPL16B9755.729ENSCSAG00000019054-8460.234Chlorocebus_sabaeus
YNL069CRPL16B8262.577ENSCPBG00000014922RPL13A8061.404Chrysemys_picta_bellii
YNL069CRPL16B9758.462ENSCING00000014892-9558.462Ciona_intestinalis
YNL069CRPL16B9756.410ENSCSAVG00000000666-9556.410Ciona_savignyi
YNL069CRPL16B9756.771ENSCANG00000040885-8461.404Colobus_angolensis_palliatus
YNL069CRPL16B9756.250ENSCANG00000000304-8460.819Colobus_angolensis_palliatus
YNL069CRPL16B7952.532ENSCANG00000018732-9652.532Colobus_angolensis_palliatus
YNL069CRPL16B9757.292ENSCGRG00001018651-9256.771Cricetulus_griseus_chok1gshd
YNL069CRPL16B9757.292ENSCGRG00000005890-8664.035Cricetulus_griseus_crigri
YNL069CRPL16B8253.988ENSCSEG00000002640rpl13a9050.802Cynoglossus_semilaevis
YNL069CRPL16B9550.777ENSCVAG00000011043rpl13a9050.802Cyprinodon_variegatus
YNL069CRPL16B9755.729ENSDARG00000044093rpl13a9155.729Danio_rerio
YNL069CRPL16B9756.771ENSDNOG00000035370-8461.988Dasypus_novemcinctus
YNL069CRPL16B9757.812ENSDORG00000012194-8465.179Dipodomys_ordii
YNL069CRPL16B10052.736FBgn0037351RpL13A7959.877Drosophila_melanogaster
YNL069CRPL16B8659.064ENSETEG00000005732-8459.064Echinops_telfairi
YNL069CRPL16B6567.442ENSETEG00000017076-6467.442Echinops_telfairi
YNL069CRPL16B9853.807ENSEBUG00000007234rpl13a9455.191Eptatretus_burgeri
YNL069CRPL16B9757.292ENSEASG00005005007RPL13A7461.988Equus_asinus_asinus
YNL069CRPL16B9757.292ENSECAG00000015832RPL13A8661.988Equus_caballus
YNL069CRPL16B7353.103ENSEEUG00000014071RPL13A6952.414Erinaceus_europaeus
YNL069CRPL16B9656.316ENSELUG00000014577rpl13a9256.316Esox_lucius
YNL069CRPL16B8661.404ENSFCAG00000009194RPL13A8461.404Felis_catus
YNL069CRPL16B9757.292ENSFDAG00000016892RPL13A8664.035Fukomys_damarensis
YNL069CRPL16B9754.688ENSFHEG00000004165rpl13a9156.150Fundulus_heteroclitus
YNL069CRPL16B9554.922ENSGMOG00000010791rpl13a8756.150Gadus_morhua
YNL069CRPL16B9756.250ENSGAFG00000007578rpl13a9155.729Gambusia_affinis
YNL069CRPL16B9555.959ENSGACG00000009310rpl13a9354.688Gasterosteus_aculeatus
YNL069CRPL16B7758.824ENSGAGG00000002437RPL13A6257.764Gopherus_agassizii
YNL069CRPL16B9756.771ENSGGOG00000002932RPL13A8461.404Gorilla_gorilla
YNL069CRPL16B6861.194ENSGGOG00000039250-8161.194Gorilla_gorilla
YNL069CRPL16B9756.250ENSGGOG00000023324-8460.819Gorilla_gorilla
YNL069CRPL16B6664.122ENSGGOG00000039904-7064.122Gorilla_gorilla
YNL069CRPL16B9556.995ENSHBUG00000023575rpl13a9157.219Haplochromis_burtoni
YNL069CRPL16B9757.292ENSHGLG00000010070RPL13A9456.771Heterocephalus_glaber_female
YNL069CRPL16B9757.292ENSHGLG00100010359RPL13A8664.035Heterocephalus_glaber_male
YNL069CRPL16B9457.219ENSHCOG00000007902rpl13a9357.219Hippocampus_comes
YNL069CRPL16B9558.031ENSIPUG00000014098rpl13a8956.771Ictalurus_punctatus
YNL069CRPL16B9856.410ENSSTOG00000021558RPL13A9456.771Ictidomys_tridecemlineatus
YNL069CRPL16B9757.812ENSJJAG00000000343-8664.912Jaculus_jaculus
YNL069CRPL16B9756.771ENSKMAG00000009039rpl13a8361.404Kryptolebias_marmoratus
YNL069CRPL16B9556.477ENSLBEG00000005434rpl13a8360.234Labrus_bergylta
YNL069CRPL16B8261.212ENSLACG00000019092RPL13A9057.143Latimeria_chalumnae
YNL069CRPL16B8261.963ENSLOCG00000004388rpl13a9157.754Lepisosteus_oculatus
YNL069CRPL16B9756.771ENSLAFG00000016213RPL13A8461.404Loxodonta_africana
YNL069CRPL16B9754.315ENSMFAG00000002765-8458.523Macaca_fascicularis
YNL069CRPL16B7658.940ENSMFAG00000003121-7959.615Macaca_fascicularis
YNL069CRPL16B9756.771ENSMFAG00000001097-8461.404Macaca_fascicularis
YNL069CRPL16B9756.771ENSMMUG00000007551RPL13A8561.404Macaca_mulatta
YNL069CRPL16B8658.523ENSMMUG00000009018-8458.523Macaca_mulatta
YNL069CRPL16B9756.771ENSMNEG00000034977RPL13A8461.404Macaca_nemestrina
YNL069CRPL16B5766.372ENSMLEG00000038132-9666.372Mandrillus_leucophaeus
YNL069CRPL16B8360.976ENSMAMG00000007425rpl13a7260.234Mastacembelus_armatus
YNL069CRPL16B9556.995ENSMZEG00005004952rpl13a9157.219Maylandia_zebra
YNL069CRPL16B9857.436ENSMAUG00000016402-9456.923Mesocricetus_auratus
YNL069CRPL16B9656.545ENSMAUG00000020351-9156.545Mesocricetus_auratus
YNL069CRPL16B8456.024ENSMAUG00000012558-8556.024Mesocricetus_auratus
YNL069CRPL16B7853.548ENSMICG00000043457-8353.548Microcebus_murinus
YNL069CRPL16B9756.771ENSMICG00000009318-8461.404Microcebus_murinus
YNL069CRPL16B9757.292ENSMOCG00000002774-8664.035Microtus_ochrogaster
YNL069CRPL16B8652.632ENSMOCG00000016427-8952.632Microtus_ochrogaster
YNL069CRPL16B9458.289ENSMMOG00000010248rpl13a8461.404Mola_mola
YNL069CRPL16B9555.959ENSMALG00000012804rpl13a8359.649Monopterus_albus
YNL069CRPL16B9756.771MGP_CAROLIEiJ_G0029698-9256.250Mus_caroli
YNL069CRPL16B9757.292ENSMUSG00000074129Rpl13a8767.442Mus_musculus
YNL069CRPL16B9756.771MGP_PahariEiJ_G0012923-9256.250Mus_pahari
YNL069CRPL16B9754.688MGP_SPRETEiJ_G0017763-9254.167Mus_spretus
YNL069CRPL16B9757.292MGP_SPRETEiJ_G0030796Rpl13a9256.771Mus_spretus
YNL069CRPL16B9756.771ENSMPUG00000002604RPL13A8461.404Mustela_putorius_furo
YNL069CRPL16B8761.272ENSMLUG00000004945RPL13A8561.272Myotis_lucifugus
YNL069CRPL16B9757.812ENSNGAG00000021984-9457.292Nannospalax_galili
YNL069CRPL16B9556.995ENSNBRG00000024166rpl13a9157.219Neolamprologus_brichardi
YNL069CRPL16B9750.256ENSNLEG00000005211RPL13A8454.023Nomascus_leucogenys
YNL069CRPL16B9752.083ENSNLEG00000012957-8256.140Nomascus_leucogenys
YNL069CRPL16B8658.824ENSNLEG00000033213-8558.824Nomascus_leucogenys
YNL069CRPL16B7052.899ENSMEUG00000005199RPL13A8452.740Notamacropus_eugenii
YNL069CRPL16B9753.125ENSOPRG00000001194RPL13A9252.604Ochotona_princeps
YNL069CRPL16B9757.292ENSODEG00000016831-8664.035Octodon_degus
YNL069CRPL16B9756.250ENSODEG00000020233-9255.729Octodon_degus
YNL069CRPL16B9756.250ENSODEG00000019218-9255.729Octodon_degus
YNL069CRPL16B9757.292ENSODEG00000020468-9256.771Octodon_degus
YNL069CRPL16B9558.031ENSONIG00000003560rpl13a9157.219Oreochromis_niloticus
YNL069CRPL16B9458.289ENSOANG00000000828RPL13A8461.988Ornithorhynchus_anatinus
YNL069CRPL16B7456.463ENSOCUG00000026592-9156.463Oryctolagus_cuniculus
YNL069CRPL16B9457.754ENSORLG00000014599rpl13a7560.819Oryzias_latipes
YNL069CRPL16B9457.754ENSORLG00020013090rpl13a7560.819Oryzias_latipes_hni
YNL069CRPL16B9657.368ENSORLG00015011634rpl13a8460.345Oryzias_latipes_hsok
YNL069CRPL16B9655.897ENSOMEG00000010232rpl13a7560.234Oryzias_melastigma
YNL069CRPL16B9755.440ENSOGAG00000030280-8459.884Otolemur_garnettii
YNL069CRPL16B9753.646ENSOGAG00000026177-8457.895Otolemur_garnettii
YNL069CRPL16B9757.292ENSOGAG00000004625-8461.988Otolemur_garnettii
YNL069CRPL16B8648.538ENSOARG00000017798-8448.538Ovis_aries
YNL069CRPL16B9757.292ENSOARG00000020159-9256.771Ovis_aries
YNL069CRPL16B9757.292ENSOARG00000013169-9256.771Ovis_aries
YNL069CRPL16B9753.125ENSPPAG00000019107-8457.310Pan_paniscus
YNL069CRPL16B9756.771ENSPPAG00000037365RPL13A8461.404Pan_paniscus
YNL069CRPL16B6664.122ENSPPAG00000006023-6964.122Pan_paniscus
YNL069CRPL16B8461.677ENSPPAG00000023659-8261.677Pan_paniscus
YNL069CRPL16B8661.404ENSPPRG00000011265RPL13A8461.404Panthera_pardus
YNL069CRPL16B6754.887ENSPTRG00000042978-7961.607Pan_troglodytes
YNL069CRPL16B9756.250ENSPTRG00000050666-8460.819Pan_troglodytes
YNL069CRPL16B9756.771ENSPTRG00000011298RPL13A8461.404Pan_troglodytes
YNL069CRPL16B6666.923ENSPTRG00000052284-8966.923Pan_troglodytes
YNL069CRPL16B9753.125ENSPTRG00000049426-8457.310Pan_troglodytes
YNL069CRPL16B9756.771ENSPANG00000012050RPL13A8461.404Papio_anubis
YNL069CRPL16B9458.289ENSPKIG00000000720rpl13a9158.289Paramormyrops_kingsleyae
YNL069CRPL16B8263.190ENSPSIG00000018234RPL13A8661.988Pelodiscus_sinensis
YNL069CRPL16B9557.513ENSPMGG00000010552rpl13a8957.754Periophthalmus_magnuspinnatus
YNL069CRPL16B9757.292ENSPEMG00000009221-8664.035Peromyscus_maniculatus_bairdii
YNL069CRPL16B9857.216ENSPMAG00000006362rpl13a8262.130Petromyzon_marinus
YNL069CRPL16B7949.359ENSPCIG00000014063-8349.359Phascolarctos_cinereus
YNL069CRPL16B8263.804ENSPCIG00000007340-8563.158Phascolarctos_cinereus
YNL069CRPL16B9556.995ENSPFOG00000013546rpl13a9157.219Poecilia_formosa
YNL069CRPL16B7963.462ENSPLAG00000016066rpl13a9157.219Poecilia_latipinna
YNL069CRPL16B9556.995ENSPMEG00000018384rpl13a9157.219Poecilia_mexicana
YNL069CRPL16B9556.995ENSPREG00000020079rpl13a9157.219Poecilia_reticulata
YNL069CRPL16B9756.771ENSPPYG00000010251-8461.404Pongo_abelii
YNL069CRPL16B9756.771ENSPPYG00000006798-8461.404Pongo_abelii
YNL069CRPL16B8661.404ENSPCAG00000004086RPL13A8461.404Procavia_capensis
YNL069CRPL16B9045.251ENSPCOG00000016293-8048.485Propithecus_coquereli
YNL069CRPL16B9756.771ENSPCOG00000023898RPL13A8561.404Propithecus_coquereli
YNL069CRPL16B9756.771ENSPVAG00000010958RPL13A8461.404Pteropus_vampyrus
YNL069CRPL16B9556.995ENSPNYG00000019779rpl13a9157.219Pundamilia_nyererei
YNL069CRPL16B9556.995ENSPNAG00000026887rpl13a9155.729Pygocentrus_nattereri
YNL069CRPL16B9757.292ENSRNOG00000062298Rpl13a9256.771Rattus_norvegicus
YNL069CRPL16B8661.404ENSRBIG00000044737RPL13A8561.404Rhinopithecus_bieti
YNL069CRPL16B6664.394ENSRROG00000028369-8653.801Rhinopithecus_roxellana
YNL069CRPL16B9752.083ENSRROG00000036041-8456.140Rhinopithecus_roxellana
YNL069CRPL16B9756.771ENSRROG00000042976-8461.404Rhinopithecus_roxellana
YNL069CRPL16B9756.250ENSSBOG00000028481RPL13A8660.819Saimiri_boliviensis_boliviensis
YNL069CRPL16B8650.273ENSSBOG00000024635-8550.273Saimiri_boliviensis_boliviensis
YNL069CRPL16B7962.821ENSSFOG00015001972rpl13a9157.219Scleropages_formosus
YNL069CRPL16B9556.477ENSSDUG00000017181rpl13a8660.234Seriola_dumerili
YNL069CRPL16B8560.947ENSSLDG00000007920-8761.047Seriola_lalandi_dorsalis
YNL069CRPL16B9556.477ENSSLDG00000002561rpl13a8360.234Seriola_lalandi_dorsalis
YNL069CRPL16B5552.252ENSSPUG00000014548RPL13A8852.252Sphenodon_punctatus
YNL069CRPL16B8151.875ENSSSCG00000031204-8751.875Sus_scrofa
YNL069CRPL16B9856.923ENSSSCG00000034448-9356.410Sus_scrofa
YNL069CRPL16B9557.513ENSTRUG00000023611rpl13a9156.684Takifugu_rubripes
YNL069CRPL16B5063.636ENSTNIG00000017285rpl13a10063.636Tetraodon_nigroviridis
YNL069CRPL16B9756.771ENSTTRG00000005485RPL13A8461.404Tursiops_truncatus
YNL069CRPL16B9756.771ENSUAMG00000008438RPL13A8461.404Ursus_americanus
YNL069CRPL16B9756.771ENSUMAG00000002385RPL13A8461.404Ursus_maritimus
YNL069CRPL16B9754.167ENSVPAG00000006564RPL13A9453.646Vicugna_pacos
YNL069CRPL16B9756.771ENSVVUG00000022597RPL13A8862.130Vulpes_vulpes
YNL069CRPL16B9656.633ENSXETG00000014144rpl13a7560.345Xenopus_tropicalis
YNL069CRPL16B9556.995ENSXCOG00000004826rpl13a9157.219Xiphophorus_couchianus
YNL069CRPL16B9556.995ENSXMAG00000027604rpl13a9157.219Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us