EuRBPDB

Description

Ensembl ID: YNL189W (Gene tree)
Gene ID: -
Gene Symbol: SRP1
Alias: KAP60|SCM1
Full Name: Karyopherin alpha homolog%3B forms a dimer with karyopherin beta Kap95p to mediate import of nuclear proteins%2C binds the nuclear localization signal of the substrate during import%3B involved in cotranslational protein degradation%3B binds ribosome-bound nascent polypeptides%3B Srp1p and Sts1p couple proteasomes to nascent polypeptides emerging from the ribosome for cotranslational degradation
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 1629
Position: chrXIV: 284260-285888
Accession: S000005133
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YNL189W_mRNA	-	1629	-	YNL189W_mRNA	542 (aa)	-	Q02821

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YNL189W	SRP1	96	43.186	WBGene00002074	ima-3	96	43.186	Caenorhabditis_elegans
YNL189W	SRP1	97	44.173	FBgn0027338	Kap-alpha3	99	44.717	Drosophila_melanogaster
YNL189W	SRP1	94	41.779	FBgn0267727	Pen	96	41.779	Drosophila_melanogaster
YNL189W	SRP1	94	53.620	ENSG00000025800	KPNA6	94	53.620	Homo_sapiens
YNL189W	SRP1	94	51.456	ENSG00000114030	KPNA1	98	50.153	Homo_sapiens
YNL189W	SRP1	97	46.893	ENSG00000102753	KPNA3	98	46.893	Homo_sapiens