EuRBPDB

Description

Ensembl ID: YNL197C (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 1986
Position: chrXIV:267608-269593
Accession: S000005141
RBP type: canonical RBP
Summary: RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci%3B regulates genes involved in the cell cycle%2C sister chromatid cohesion%2C and stress response%3B acts as a cytoplasmic retention factor for Cdc28p and associated cyclins%3B regulates cell fate and dose-dependently regulates the critical cell size required for passage through Start%3B Tpk1p (PKA) mediated phosphorylation (S568) inhibits Whi3p function%2C decreasing its interaction with CLN3 mRNA%3B regulates ploidy

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YNL197C_mRNA	RRM_1	PF00076.22	6.4e-19	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YNL197C_mRNA	-	1986	-	YNL197C_mRNA	661 (aa)	-	P34761

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YNL197C	-	86	38.665	YDL224C	-	87	38.811