EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YNL207W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Essential serine kinase involved in the processing of 20S pre-rRNA%3B involved in the processing of the 20S pre-rRNA into mature 18S rRNA%3B has similarity to Rio1p
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 1278 bases
Position: chrXIV:255353-256630
Accession: S000005151
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YNL207W_mRNA	RIO1	PF01163.22	1.6e-42	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YNL207W_mRNA	-	1278	-	YNL207W_mRNA	425 (aa)	-	P40160

Gene Model

Click here to download YNL207W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YNL207W's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YNL207W	-	93	41.667	ENSG00000058729	RIOK2	76	41.667	Homo_sapiens
YNL207W	-	78	46.828	ENSAPOG00000011797	riok2	68	44.133	Acanthochromis_polyacanthus
YNL207W	-	84	43.052	ENSAMEG00000014615	RIOK2	62	43.052	Ailuropoda_melanoleuca
YNL207W	-	66	38.929	ENSACIG00000020646	riok2	62	38.750	Amphilophus_citrinellus
YNL207W	-	78	46.828	ENSAOCG00000021840	riok2	66	44.415	Amphiprion_ocellaris
YNL207W	-	78	47.432	ENSAPEG00000020853	riok2	66	44.947	Amphiprion_percula
YNL207W	-	78	46.828	ENSATEG00000005671	riok2	65	44.800	Anabas_testudineus
YNL207W	-	97	40.000	ENSACAG00000011858	RIOK2	72	40.000	Anolis_carolinensis
YNL207W	-	79	45.536	ENSANAG00000015977	RIOK2	56	45.536	Aotus_nancymaae
YNL207W	-	80	45.428	ENSACLG00000002755	riok2	67	43.045	Astatotilapia_calliptera
YNL207W	-	86	44.715	ENSAMXG00000002368	riok2	66	44.715	Astyanax_mexicanus
YNL207W	-	96	40.888	ENSBTAG00000011763	RIOK2	72	40.888	Bos_taurus
YNL207W	-	86	43.989	WBGene00013688	riok-2	71	41.866	Caenorhabditis_elegans
YNL207W	-	93	42.000	ENSCJAG00000040045	RIOK2	66	42.000	Callithrix_jacchus
YNL207W	-	99	40.230	ENSCAFG00000007745	RIOK2	74	40.230	Canis_familiaris
YNL207W	-	81	39.548	ENSCAFG00020015532	-	90	39.548	Canis_lupus_dingo
YNL207W	-	99	39.858	ENSCAFG00020011453	-	85	39.858	Canis_lupus_dingo
YNL207W	-	88	42.246	ENSCHIG00000016709	RIOK2	61	42.246	Capra_hircus
YNL207W	-	98	39.713	ENSTSYG00000001916	RIOK2	69	39.713	Carlito_syrichta
YNL207W	-	63	44.737	ENSCAPG00000006762	RIOK2	52	44.737	Cavia_aperea
YNL207W	-	78	44.578	ENSCPOG00000010551	RIOK2	56	44.578	Cavia_porcellus
YNL207W	-	79	45.833	ENSCCAG00000025712	RIOK2	56	45.833	Cebus_capucinus
YNL207W	-	93	41.919	ENSCATG00000035047	RIOK2	65	41.919	Cercocebus_atys
YNL207W	-	79	44.048	ENSCLAG00000006790	RIOK2	56	44.048	Chinchilla_lanigera
YNL207W	-	70	41.667	ENSCSAG00000014233	RIOK2	70	41.667	Chlorocebus_sabaeus
YNL207W	-	74	37.705	ENSCHOG00000003803	RIOK2	50	37.705	Choloepus_hoffmanni
YNL207W	-	79	44.940	ENSCPBG00000015732	RIOK2	56	44.940	Chrysemys_picta_bellii
YNL207W	-	78	45.482	ENSCING00000002364	-	75	40.640	Ciona_intestinalis
YNL207W	-	91	41.710	ENSCSAVG00000006970	-	71	41.710	Ciona_savignyi
YNL207W	-	92	41.013	ENSCGRG00001000871	Riok2	65	41.013	Cricetulus_griseus_chok1gshd
YNL207W	-	92	41.013	ENSCGRG00000008541	Riok2	65	41.013	Cricetulus_griseus_crigri
YNL207W	-	96	42.892	ENSCSEG00000014204	riok2	74	42.892	Cynoglossus_semilaevis
YNL207W	-	78	46.526	ENSCVAG00000012034	riok2	68	44.332	Cyprinodon_variegatus
YNL207W	-	80	46.903	ENSDARG00000035264	riok2	61	46.903	Danio_rerio
YNL207W	-	79	44.940	ENSDNOG00000037305	RIOK2	56	44.940	Dasypus_novemcinctus
YNL207W	-	79	44.940	ENSDORG00000016345	Riok2	58	44.940	Dipodomys_ordii
YNL207W	-	77	44.073	FBgn0039306	RIOK2	56	44.073	Drosophila_melanogaster
YNL207W	-	88	39.050	ENSEBUG00000006099	riok2	60	39.142	Eptatretus_burgeri
YNL207W	-	87	42.377	ENSEASG00005018799	RIOK2	65	42.377	Equus_asinus_asinus
YNL207W	-	92	41.432	ENSECAG00000018441	RIOK2	65	41.432	Equus_caballus
YNL207W	-	67	50.526	ENSELUG00000011239	riok2	66	50.526	Esox_lucius
YNL207W	-	92	40.712	ENSFCAG00000024077	RIOK2	65	40.712	Felis_catus
YNL207W	-	86	40.599	ENSFALG00000010277	RIOK2	71	38.725	Ficedula_albicollis
YNL207W	-	92	40.347	ENSFDAG00000015288	RIOK2	69	40.347	Fukomys_damarensis
YNL207W	-	78	45.921	ENSFHEG00000010950	riok2	69	42.711	Fundulus_heteroclitus
YNL207W	-	78	47.590	ENSGMOG00000011354	riok2	73	44.310	Gadus_morhua
YNL207W	-	94	40.796	ENSGALG00000015288	RIOK2	65	40.796	Gallus_gallus
YNL207W	-	82	45.272	ENSGAFG00000012056	riok2	73	42.439	Gambusia_affinis
YNL207W	-	80	46.018	ENSGACG00000009754	riok2	78	41.205	Gasterosteus_aculeatus
YNL207W	-	79	44.643	ENSGAGG00000013791	RIOK2	56	44.643	Gopherus_agassizii
YNL207W	-	93	41.855	ENSGGOG00000022136	RIOK2	65	41.855	Gorilla_gorilla
YNL207W	-	80	45.723	ENSHBUG00000010705	riok2	74	41.626	Haplochromis_burtoni
YNL207W	-	79	43.750	ENSHGLG00000009139	-	56	43.750	Heterocephalus_glaber_female
YNL207W	-	79	43.750	ENSHGLG00100014700	RIOK2	56	43.750	Heterocephalus_glaber_male
YNL207W	-	78	46.224	ENSHCOG00000015555	riok2	59	46.224	Hippocampus_comes
YNL207W	-	98	41.943	ENSIPUG00000007450	riok2	76	41.943	Ictalurus_punctatus
YNL207W	-	98	41.289	ENSSTOG00000006659	RIOK2	69	41.289	Ictidomys_tridecemlineatus
YNL207W	-	79	45.833	ENSJJAG00000016582	Riok2	57	45.833	Jaculus_jaculus
YNL207W	-	78	47.130	ENSKMAG00000013229	riok2	73	42.752	Kryptolebias_marmoratus
YNL207W	-	94	42.402	ENSLBEG00000015421	riok2	73	42.402	Labrus_bergylta
YNL207W	-	78	41.441	ENSLACG00000000274	RIOK2	57	41.441	Latimeria_chalumnae
YNL207W	-	78	47.734	ENSLOCG00000006432	riok2	59	47.734	Lepisosteus_oculatus
YNL207W	-	79	44.345	ENSLAFG00000000919	RIOK2	56	44.345	Loxodonta_africana
YNL207W	-	93	42.857	ENSMFAG00000033056	RIOK2	66	42.857	Macaca_fascicularis
YNL207W	-	93	42.857	ENSMMUG00000000307	RIOK2	66	42.857	Macaca_mulatta
YNL207W	-	93	42.607	ENSMNEG00000029708	RIOK2	66	42.607	Macaca_nemestrina
YNL207W	-	78	42.388	ENSMLEG00000040038	RIOK2	61	42.388	Mandrillus_leucophaeus
YNL207W	-	78	46.224	ENSMAMG00000013310	riok2	78	40.404	Mastacembelus_armatus
YNL207W	-	80	45.428	ENSMZEG00005017067	riok2	68	41.832	Maylandia_zebra
YNL207W	-	76	44.720	ENSMGAG00000006986	RIOK2	64	42.010	Meleagris_gallopavo
YNL207W	-	80	43.466	ENSMICG00000037437	RIOK2	59	43.466	Microcebus_murinus
YNL207W	-	91	42.347	ENSMOCG00000004230	Riok2	66	42.347	Microtus_ochrogaster
YNL207W	-	80	46.313	ENSMMOG00000018155	riok2	75	40.476	Mola_mola
YNL207W	-	81	44.663	ENSMODG00000015548	RIOK2	60	44.663	Monodelphis_domestica
YNL207W	-	93	42.965	ENSMALG00000011266	riok2	72	42.965	Monopterus_albus
YNL207W	-	92	41.013	ENSMUSG00000116564	Riok2	94	46.457	Mus_musculus
YNL207W	-	79	44.643	ENSMPUG00000004450	RIOK2	56	44.643	Mustela_putorius_furo
YNL207W	-	98	40.625	ENSMLUG00000016113	RIOK2	68	40.625	Myotis_lucifugus
YNL207W	-	92	40.898	ENSNGAG00000017971	Riok2	65	40.898	Nannospalax_galili
YNL207W	-	93	42.172	ENSNLEG00000014474	RIOK2	65	42.172	Nomascus_leucogenys
YNL207W	-	68	34.364	ENSMEUG00000010529	RIOK2	55	34.364	Notamacropus_eugenii
YNL207W	-	80	45.723	ENSONIG00000013689	riok2	66	44.357	Oreochromis_niloticus
YNL207W	-	74	43.671	ENSOANG00000001225	RIOK2	54	43.671	Ornithorhynchus_anatinus
YNL207W	-	86	42.781	ENSOCUG00000001656	RIOK2	62	42.781	Oryctolagus_cuniculus
YNL207W	-	80	46.018	ENSORLG00020011553	riok2	67	43.617	Oryzias_latipes_hni
YNL207W	-	80	45.723	ENSORLG00015001085	riok2	67	43.351	Oryzias_latipes_hsok
YNL207W	-	78	46.526	ENSOMEG00000004617	riok2	78	41.966	Oryzias_melastigma
YNL207W	-	92	42.308	ENSOGAG00000008467	RIOK2	64	42.308	Otolemur_garnettii
YNL207W	-	88	42.133	ENSOARG00000018138	RIOK2	62	42.133	Ovis_aries
YNL207W	-	98	40.573	ENSPPAG00000027414	RIOK2	80	40.573	Pan_paniscus
YNL207W	-	99	38.621	ENSPPRG00000000169	RIOK2	74	38.621	Panthera_pardus
YNL207W	-	96	39.437	ENSPTIG00000008344	RIOK2	72	39.437	Panthera_tigris_altaica
YNL207W	-	93	41.414	ENSPTRG00000017100	RIOK2	65	41.414	Pan_troglodytes
YNL207W	-	93	42.356	ENSPANG00000011977	RIOK2	65	42.356	Papio_anubis
YNL207W	-	78	47.432	ENSPKIG00000016220	riok2	61	47.432	Paramormyrops_kingsleyae
YNL207W	-	79	44.345	ENSPSIG00000013238	RIOK2	56	44.345	Pelodiscus_sinensis
YNL207W	-	80	46.018	ENSPMGG00000021822	riok2	72	41.388	Periophthalmus_magnuspinnatus
YNL207W	-	91	41.085	ENSPEMG00000018872	Riok2	64	41.085	Peromyscus_maniculatus_bairdii
YNL207W	-	82	45.559	ENSPFOG00000017064	riok2	65	44.565	Poecilia_formosa
YNL207W	-	82	45.272	ENSPLAG00000003043	riok2	67	43.864	Poecilia_latipinna
YNL207W	-	82	45.559	ENSPMEG00000007622	riok2	67	44.156	Poecilia_mexicana
YNL207W	-	82	46.132	ENSPREG00000002255	riok2	67	44.125	Poecilia_reticulata
YNL207W	-	93	42.172	ENSPPYG00000015654	RIOK2	65	42.172	Pongo_abelii
YNL207W	-	98	39.713	ENSPCAG00000006508	RIOK2	69	39.713	Procavia_capensis
YNL207W	-	79	44.940	ENSPCOG00000024315	RIOK2	56	44.940	Propithecus_coquereli
YNL207W	-	98	39.952	ENSPVAG00000016658	RIOK2	69	39.952	Pteropus_vampyrus
YNL207W	-	93	41.117	ENSPNYG00000018868	riok2	66	43.467	Pundamilia_nyererei
YNL207W	-	86	45.257	ENSPNAG00000010841	riok2	66	45.257	Pygocentrus_nattereri
YNL207W	-	92	41.582	ENSRNOG00000012692	Riok2	65	41.582	Rattus_norvegicus
YNL207W	-	93	42.607	ENSRBIG00000030658	RIOK2	65	42.607	Rhinopithecus_bieti
YNL207W	-	93	42.607	ENSRROG00000039203	RIOK2	65	42.607	Rhinopithecus_roxellana
YNL207W	-	79	45.536	ENSSBOG00000032152	RIOK2	56	45.536	Saimiri_boliviensis_boliviensis
YNL207W	-	78	44.277	ENSSHAG00000006935	-	59	42.978	Sarcophilus_harrisii
YNL207W	-	78	46.224	ENSSFOG00015005966	riok2	63	43.631	Scleropages_formosus
YNL207W	-	78	46.526	ENSSMAG00000010529	riok2	72	42.500	Scophthalmus_maximus
YNL207W	-	78	46.828	ENSSDUG00000014891	riok2	73	42.683	Seriola_dumerili
YNL207W	-	78	46.828	ENSSLDG00000001926	riok2	73	42.439	Seriola_lalandi_dorsalis
YNL207W	-	94	35.250	ENSSARG00000001798	RIOK2	70	35.250	Sorex_araneus
YNL207W	-	78	41.867	ENSSPUG00000003509	RIOK2	73	41.867	Sphenodon_punctatus
YNL207W	-	80	42.473	ENSSPAG00000016554	riok2	70	40.326	Stegastes_partitus
YNL207W	-	78	43.675	ENSTGUG00000001223	RIOK2	72	39.387	Taeniopygia_guttata
YNL207W	-	78	46.224	ENSTRUG00000011455	riok2	68	42.386	Takifugu_rubripes
YNL207W	-	54	43.882	ENSTNIG00000015401	riok2	67	40.129	Tetraodon_nigroviridis
YNL207W	-	79	42.262	ENSTTRG00000010640	RIOK2	56	42.262	Tursiops_truncatus
YNL207W	-	79	42.486	ENSUAMG00000008585	RIOK2	60	42.486	Ursus_americanus
YNL207W	-	84	43.089	ENSUMAG00000006726	RIOK2	62	43.089	Ursus_maritimus
YNL207W	-	84	42.547	ENSVVUG00000020170	RIOK2	62	42.547	Vulpes_vulpes
YNL207W	-	78	47.289	ENSXETG00000013194	riok2	65	43.147	Xenopus_tropicalis
YNL207W	-	82	45.559	ENSXCOG00000016879	riok2	78	42.439	Xiphophorus_couchianus
YNL207W	-	82	45.272	ENSXMAG00000007425	riok2	73	42.439	Xiphophorus_maculatus