EuRBPDB

Description

Ensembl ID: YNL251C (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 1728
Position: chrXIV:172588-174315
Accession: S000005195
RBP type: canonical RBP
Summary: RNA-binding subunit of Nrd1 complex%3B complex interacts with exosome to mediate 3'-end formation of some mRNAs%2C snRNAs%2C snoRNAs%2C and CUTs%3B interacts with CTD of RNA pol II large subunit Rpo21p at phosphorylated Ser5 to direct transcription termination of non-polyadenylated transcripts%3B H3K4 trimethylation of transcribed regions by Set1p enhances recruitment of Nrd1p to those sites%3B role in regulation of mitochondrial abundance and cell size

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YNL251C_mRNA	RRM_1	PF00076.22	8.3e-07	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128
23222640	Global analysis of yeast mRNPs	IC & yeast	2012 Dec 9	Mitchell SF	DOI: 10.1038/nsmb.2468

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YNL251C_mRNA	-	1728	-	YNL251C_mRNA	575 (aa)	-	P53617

Gene Model

Protein-Protein Interaction (PPI)