EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
YNL255C (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Saccharomyces_cerevisiae
Status
confidence
Strand
Minus strand
Length
462
Position
chrXIV:167329-167790
Accession
S000005199
RBP type
canonical RBP
Summary
Translational activator for mRNAs with internal ribosome entry sites%3B associates with polysomes and binds to a specific subset of mRNAs%3B localizes to RNA processing bodies (P bodies) and to stress granules%3B may have a role in translation regulation under stress conditions%3B ortholog of human ZNF9/CNBP%2C a gene involved in myotonic dystrophy type 2
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
YNL255C_mRNAzf-CCHCPF00098.234.2e-5517
YNL255C_mRNAzf-CCHCPF00098.234.2e-5527
YNL255C_mRNAzf-CCHCPF00098.234.2e-5537
YNL255C_mRNAzf-CCHCPF00098.234.2e-5547
YNL255C_mRNAzf-CCHCPF00098.234.2e-5557
YNL255C_mRNAzf-CCHCPF00098.234.2e-5567
YNL255C_mRNAzf-CCHCPF00098.234.2e-5577
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26632259The RNA-binding proteomes from yeast to man harbour conserved enigmRBPsRIC.PAR_CL & yeast2015 Dec 3Beckmann BMDOI: 10.1038/ncomms10127
26595419Conserved mRNA-binding proteomes in eukaryotic organismsmRBPome & yeast2015 Nov 23Matia Gonzalez AMDOI: 10.1038/nsmb.3128
23222640Global analysis of yeast mRNPsIC & yeast2012 Dec 9Mitchell SFDOI: 10.1038/nsmb.2468
21124907A screen for RNA binding proteins in yeast indicates dual functions for many enzymesProtoArray & yeast2010 Nov 11DOI: 10.1371/journal.pone.0015499
20844764Proteome-wide search reveals unexpected RNA binding proteins in Saccharomyces cerevisiaeBioRadArray & yeast2010 Sep 10Tsvetanova NGDOI: 10.1371/journal.pone.0012671
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
YNL255C_mRNA-462-YNL255C_mRNA153 (aa)-P53849
Gene Model
Click here to download YNL255C's gene model file
Protein-Protein Interaction (PPI)

Clik here to download YNL255C's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
YNL255C-10034.839ENSG00000187969ZCCHC138935.484Homo_sapiens
YNL255C-10046.988ENSG00000169714CNBP9842.308Homo_sapiens
YNL255C-9940.769ENSAPOG00000010571cnbpa9551.220Acanthochromis_polyacanthus
YNL255C-10046.988ENSAMEG00000015334CNBP9841.964Ailuropoda_melanoleuca
YNL255C-10040.769ENSACIG00000014747-10051.220Amphilophus_citrinellus
YNL255C-9940.769ENSACIG00000003540cnbpa9851.220Amphilophus_citrinellus
YNL255C-10040.769ENSAOCG00000007087cnbpa9751.220Amphiprion_ocellaris
YNL255C-10040.769ENSAPEG00000014455cnbpa9751.220Amphiprion_percula
YNL255C-10040.769ENSATEG00000009504cnbpb9551.220Anabas_testudineus
YNL255C-9940.769ENSATEG00000015473cnbpa9851.220Anabas_testudineus
YNL255C-8533.663ENSAPLG00000005968ZCCHC97133.663Anas_platyrhynchos
YNL255C-10046.988ENSAPLG00000014227-9841.964Anas_platyrhynchos
YNL255C-9641.905ENSANAG00000019917ZCCHC139539.252Aotus_nancymaae
YNL255C-10034.951ENSANAG00000018980-9334.951Aotus_nancymaae
YNL255C-10046.988ENSANAG00000030514-9841.964Aotus_nancymaae
YNL255C-9943.478ENSACLG00000006926cnbpa6644.286Astatotilapia_calliptera
YNL255C-9837.383ENSACLG00000015919-6737.383Astatotilapia_calliptera
YNL255C-9836.522ENSACLG00000011307-7536.522Astatotilapia_calliptera
YNL255C-10040.769ENSACLG00000014402cnbpb9952.500Astatotilapia_calliptera
YNL255C-10040.769ENSAMXG00000005433cnbpb10051.220Astyanax_mexicanus
YNL255C-10041.538ENSAMXG00000032363cnbpa9741.538Astyanax_mexicanus
YNL255C-10042.308ENSBTAG00000012159CNBP9842.308Bos_taurus
YNL255C-9944.944ENSBTAG00000032003ZCCHC1310044.444Bos_taurus
YNL255C-9946.341WBGene00019537K08D12.39945.283Caenorhabditis_elegans
YNL255C-10042.308ENSCJAG00000017430-9842.308Callithrix_jacchus
YNL255C-10046.988ENSCAFG00000004320CNBP9841.964Canis_familiaris
YNL255C-10036.129ENSCAFG00000032517ZCCHC1310036.774Canis_familiaris
YNL255C-10046.429ENSCAFG00020024539ZCCHC139746.429Canis_lupus_dingo
YNL255C-10042.308ENSCAFG00020004863-9842.308Canis_lupus_dingo
YNL255C-9938.312ENSCHIG00000019132ZCCHC138739.103Capra_hircus
YNL255C-10041.818ENSCHIG00000023083CNBP9841.818Capra_hircus
YNL255C-10042.308ENSTSYG00000004344-9842.308Carlito_syrichta
YNL255C-10046.988ENSCAPG00000015285CNBP9841.964Cavia_aperea
YNL255C-10042.308ENSCPOG00000032294-9842.308Cavia_porcellus
YNL255C-9737.079ENSCCAG00000028785ZCCHC138835.556Cebus_capucinus
YNL255C-10042.308ENSCCAG00000034056-9842.308Cebus_capucinus
YNL255C-10042.308ENSCATG00000020089-9842.308Cercocebus_atys
YNL255C-10042.308ENSCLAG00000009193-9842.308Chinchilla_lanigera
YNL255C-10043.333ENSCSAG00000000095ZCCHC139836.842Chlorocebus_sabaeus
YNL255C-10042.308ENSCSAG00000008817-9842.308Chlorocebus_sabaeus
YNL255C-9938.462ENSCHOG00000003279-9638.462Choloepus_hoffmanni
YNL255C-9945.283ENSCHOG00000000883-9045.283Choloepus_hoffmanni
YNL255C-10046.988ENSCPBG00000026349-9841.964Chrysemys_picta_bellii
YNL255C-9940.000ENSCING00000021342-9640.000Ciona_intestinalis
YNL255C-8631.373ENSCING00000008173-5831.373Ciona_intestinalis
YNL255C-9736.806ENSCSAVG00000001395-8339.231Ciona_savignyi
YNL255C-8630.189ENSCSAVG00000010478-6030.189Ciona_savignyi
YNL255C-10042.308ENSCANG00000042967-9842.308Colobus_angolensis_palliatus
YNL255C-10042.308ENSCGRG00001000923-9842.308Cricetulus_griseus_chok1gshd
YNL255C-10039.098ENSCGRG00001014784-9844.444Cricetulus_griseus_chok1gshd
YNL255C-9941.739ENSCGRG00001009786Zcchc139841.739Cricetulus_griseus_chok1gshd
YNL255C-9941.739ENSCGRG00000019302Zcchc139841.739Cricetulus_griseus_crigri
YNL255C-10039.098ENSCGRG00000019849-9844.444Cricetulus_griseus_crigri
YNL255C-10046.988ENSCGRG00000011470-9841.964Cricetulus_griseus_crigri
YNL255C-10040.000ENSCSEG00000020388cnbpb9838.776Cynoglossus_semilaevis
YNL255C-10041.538ENSCSEG00000021428cnbpa9851.220Cynoglossus_semilaevis
YNL255C-9941.538ENSCVAG00000012825cnbpa9851.220Cyprinodon_variegatus
YNL255C-10037.719ENSDARG00000070922cnbpb10053.659Danio_rerio
YNL255C-10043.373ENSDARG00000045776cnbpa9743.373Danio_rerio
YNL255C-10042.308ENSDNOG00000032573-9842.308Dasypus_novemcinctus
YNL255C-10044.186ENSDNOG00000048874ZCCHC139838.462Dasypus_novemcinctus
YNL255C-9940.000ENSDORG00000028312Zcchc1310040.000Dipodomys_ordii
YNL255C-10046.988ENSDORG00000002919-9841.964Dipodomys_ordii
YNL255C-10039.535FBgn0034802CNBP9937.190Drosophila_melanogaster
YNL255C-10042.308ENSETEG00000008408-9842.308Echinops_telfairi
YNL255C-10040.196ENSETEG00000001978-10037.815Echinops_telfairi
YNL255C-10041.538ENSEBUG00000002192cnbpb9241.538Eptatretus_burgeri
YNL255C-9938.261ENSEASG00005003120ZCCHC139845.238Equus_asinus_asinus
YNL255C-10042.308ENSEASG00005015811-9842.308Equus_asinus_asinus
YNL255C-10042.308ENSECAG00000009512CNBP9842.308Equus_caballus
YNL255C-9938.947ENSECAG00000019315ZCCHC139438.947Equus_caballus
YNL255C-8534.000ENSEEUG00000010726-7134.000Erinaceus_europaeus
YNL255C-10040.000ENSELUG00000017627cnbpa9640.000Esox_lucius
YNL255C-10040.769ENSELUG00000013402cnbpb10051.220Esox_lucius
YNL255C-10046.988ENSFCAG00000042197-9841.964Felis_catus
YNL255C-10042.308ENSFALG00000000020-9842.308Ficedula_albicollis
YNL255C-10046.988ENSFDAG00000019770CNBP9842.308Fukomys_damarensis
YNL255C-9941.538ENSFHEG00000002985cnbpa9851.220Fundulus_heteroclitus
YNL255C-8837.500ENSGMOG00000016323zcchc96234.343Gadus_morhua
YNL255C-10039.759ENSGMOG00000007798-9839.759Gadus_morhua
YNL255C-10041.353ENSGMOG00000017012cnbpa9741.353Gadus_morhua
YNL255C-10042.308ENSGALG00000005001ZCCHC139842.308Gallus_gallus
YNL255C-9941.667ENSGAFG00000015332cnbpa9641.667Gambusia_affinis
YNL255C-9943.617ENSGACG00000000061cnbpa9743.617Gasterosteus_aculeatus
YNL255C-10046.988ENSGAGG00000010888-9841.964Gopherus_agassizii
YNL255C-10046.988ENSGGOG00000010085CNBP9842.308Gorilla_gorilla
YNL255C-10034.194ENSGGOG00000008056ZCCHC138934.839Gorilla_gorilla
YNL255C-9940.769ENSHBUG00000021569cnbpa9851.220Haplochromis_burtoni
YNL255C-10040.769ENSHBUG00000019302-9952.500Haplochromis_burtoni
YNL255C-8636.634ENSHBUG00000007612zcchc99135.514Haplochromis_burtoni
YNL255C-10042.308ENSHGLG00000002069Cnbp9842.308Heterocephalus_glaber_female
YNL255C-10042.308ENSHGLG00100005610-9842.308Heterocephalus_glaber_male
YNL255C-10038.806ENSHCOG00000014737-9938.806Hippocampus_comes
YNL255C-9943.925ENSHCOG00000003457cnbpa9443.925Hippocampus_comes
YNL255C-10040.769ENSIPUG00000011418cnbpb10051.220Ictalurus_punctatus
YNL255C-10043.373ENSIPUG00000018873cnbpa9841.538Ictalurus_punctatus
YNL255C-10042.308ENSSTOG00000000173-9842.308Ictidomys_tridecemlineatus
YNL255C-10040.870ENSSTOG00000011570ZCCHC139840.870Ictidomys_tridecemlineatus
YNL255C-10037.607ENSJJAG00000017592-9837.607Jaculus_jaculus
YNL255C-10034.783ENSJJAG00000001509-6734.615Jaculus_jaculus
YNL255C-10042.308ENSJJAG00000010709-9842.308Jaculus_jaculus
YNL255C-9941.538ENSKMAG00000013742cnbpa9851.220Kryptolebias_marmoratus
YNL255C-10043.077ENSLACG00000005327cnbpb9543.077Latimeria_chalumnae
YNL255C-10042.478ENSLOCG00000013985cnbpb9842.478Lepisosteus_oculatus
YNL255C-9836.364ENSLAFG00000029278ZCCHC139935.556Loxodonta_africana
YNL255C-10042.308ENSLAFG00000002502-9842.308Loxodonta_africana
YNL255C-10044.444ENSMFAG00000030262CNBP9844.444Macaca_fascicularis
YNL255C-10042.308ENSMMUG00000011585CNBP9842.308Macaca_mulatta
YNL255C-10042.308ENSMNEG00000028473-9842.308Macaca_nemestrina
YNL255C-10042.308ENSMLEG00000041892CNBP9842.308Mandrillus_leucophaeus
YNL255C-9941.270ENSMAMG00000024106cnbpa9851.220Mastacembelus_armatus
YNL255C-10040.769ENSMAMG00000009547cnbpb9851.220Mastacembelus_armatus
YNL255C-9940.769ENSMZEG00005025913cnbpa9851.220Maylandia_zebra
YNL255C-10040.769ENSMZEG00005012030cnbpb9952.500Maylandia_zebra
YNL255C-8432.323ENSMGAG00000006841ZCCHC95132.323Meleagris_gallopavo
YNL255C-10040.964ENSMGAG00000005152-9842.308Meleagris_gallopavo
YNL255C-10042.308ENSMAUG00000011845-9842.308Mesocricetus_auratus
YNL255C-10038.710ENSMAUG00000016631-9638.710Mesocricetus_auratus
YNL255C-10045.238ENSMICG00000002990ZCCHC139745.238Microcebus_murinus
YNL255C-10046.988ENSMICG00000045988-9841.964Microcebus_murinus
YNL255C-10042.308ENSMOCG00000002044-9842.308Microtus_ochrogaster
YNL255C-9941.270ENSMMOG00000017210cnbpa9553.659Mola_mola
YNL255C-10053.659ENSMMOG00000017816cnbpb9553.659Mola_mola
YNL255C-10039.437ENSMODG00000024488-9939.437Monodelphis_domestica
YNL255C-10042.308ENSMODG00000008362-9842.308Monodelphis_domestica
YNL255C-10033.636ENSMODG00000012714-9736.641Monodelphis_domestica
YNL255C-10040.769ENSMALG00000020638cnbpb10051.220Monopterus_albus
YNL255C-9941.538ENSMALG00000021932cnbpa9441.538Monopterus_albus
YNL255C-10040.000MGP_CAROLIEiJ_G0033311Zcchc139840.000Mus_caroli
YNL255C-10045.783MGP_CAROLIEiJ_G0028620Cnbp9841.538Mus_caroli
YNL255C-10046.988ENSMUSG00000030057Cnbp9842.308Mus_musculus
YNL255C-10040.000ENSMUSG00000031330Zcchc139840.000Mus_musculus
YNL255C-10040.000MGP_PahariEiJ_G0031848Zcchc139840.000Mus_pahari
YNL255C-10046.988MGP_PahariEiJ_G0022358-9842.308Mus_pahari
YNL255C-10046.988MGP_SPRETEiJ_G0029632-9842.308Mus_spretus
YNL255C-10040.000MGP_SPRETEiJ_G0034475Zcchc139840.000Mus_spretus
YNL255C-10042.308ENSMPUG00000017315-9842.308Mustela_putorius_furo
YNL255C-10046.988ENSMLUG00000012554CNBP9846.988Myotis_lucifugus
YNL255C-10040.517ENSMLUG00000002814ZCCHC139939.098Myotis_lucifugus
YNL255C-10042.308ENSNGAG00000005084-9842.308Nannospalax_galili
YNL255C-10040.769ENSNBRG00000006996cnbpb9842.169Neolamprologus_brichardi
YNL255C-9940.769ENSNBRG00000022113cnbpa9851.220Neolamprologus_brichardi
YNL255C-8835.922ENSNBRG00000005258zcchc98634.286Neolamprologus_brichardi
YNL255C-10046.988ENSNLEG00000035879CNBP9842.308Nomascus_leucogenys
YNL255C-10042.308ENSMEUG00000011699-9842.308Notamacropus_eugenii
YNL255C-10042.308ENSOPRG00000005487-9842.308Ochotona_princeps
YNL255C-9837.500ENSODEG00000013916-6837.500Octodon_degus
YNL255C-10042.308ENSODEG00000001984-9842.308Octodon_degus
YNL255C-9933.636ENSODEG00000002073-9833.636Octodon_degus
YNL255C-10039.231ENSONIG00000000269cnbpb9039.759Oreochromis_niloticus
YNL255C-10042.308ENSOANG00000000585-9842.308Ornithorhynchus_anatinus
YNL255C-10038.406ENSOCUG00000008008ZCCHC139838.406Oryctolagus_cuniculus
YNL255C-10042.308ENSOCUG00000008696CNBP9842.308Oryctolagus_cuniculus
YNL255C-9940.769ENSORLG00000011453cnbpa9851.220Oryzias_latipes
YNL255C-9940.769ENSORLG00020018904cnbp9851.220Oryzias_latipes_hni
YNL255C-9940.769ENSORLG00015014097cnbp9851.220Oryzias_latipes_hsok
YNL255C-10042.466ENSOGAG00000013898-10042.105Otolemur_garnettii
YNL255C-10046.988ENSOGAG00000031673-9841.964Otolemur_garnettii
YNL255C-10047.619ENSOGAG00000007579ZCCHC139747.619Otolemur_garnettii
YNL255C-9946.429ENSOARG00000005961ZCCHC139745.882Ovis_aries
YNL255C-10046.988ENSOARG00000003577CNBP9846.988Ovis_aries
YNL255C-10046.988ENSPPAG00000028059-9740.152Pan_paniscus
YNL255C-10046.988ENSPPRG00000003431-9841.964Panthera_pardus
YNL255C-10042.308ENSPTIG00000017929-9842.308Panthera_tigris_altaica
YNL255C-10046.988ENSPTRG00000015369CNBP9842.308Pan_troglodytes
YNL255C-10042.308ENSPANG00000007815-9842.308Papio_anubis
YNL255C-9944.578ENSPKIG00000017562cnbpa9951.220Paramormyrops_kingsleyae
YNL255C-10040.000ENSPKIG00000024603cnbpb10051.220Paramormyrops_kingsleyae
YNL255C-10046.988ENSPSIG00000009556-9841.964Pelodiscus_sinensis
YNL255C-10038.806ENSPMAG00000003418-9741.045Petromyzon_marinus
YNL255C-9746.237ENSPMAG00000009411-9246.237Petromyzon_marinus
YNL255C-10042.308ENSPCIG00000000448-9842.308Phascolarctos_cinereus
YNL255C-9941.538ENSPFOG00000015951cnbpa9851.220Poecilia_formosa
YNL255C-9941.538ENSPLAG00000019977cnbpa9851.220Poecilia_latipinna
YNL255C-8936.190ENSPMEG00000007672zcchc95034.343Poecilia_mexicana
YNL255C-9941.538ENSPMEG00000012771cnbpa9851.220Poecilia_mexicana
YNL255C-9941.538ENSPREG00000008229cnbpa9851.220Poecilia_reticulata
YNL255C-10042.308ENSPPYG00000013423CNBP9842.308Pongo_abelii
YNL255C-10042.308ENSPCAG00000011572-9842.308Procavia_capensis
YNL255C-8534.000ENSPCOG00000018504ZCCHC97134.000Propithecus_coquereli
YNL255C-10042.748ENSPVAG00000015070-9842.748Pteropus_vampyrus
YNL255C-9940.769ENSPNYG00000005020cnbpa9851.220Pundamilia_nyererei
YNL255C-10040.769ENSPNYG00000014889-9952.500Pundamilia_nyererei
YNL255C-10041.538ENSPNAG00000022431cnbpa9741.538Pygocentrus_nattereri
YNL255C-10040.769ENSPNAG00000008143cnbpb10051.220Pygocentrus_nattereri
YNL255C-10040.000ENSRNOG00000002923Zcchc139840.000Rattus_norvegicus
YNL255C-10042.308ENSRNOG00000010239Cnbp9842.308Rattus_norvegicus
YNL255C-10042.308ENSRBIG00000030361-9842.308Rhinopithecus_bieti
YNL255C-10042.308ENSRROG00000045469CNBP9842.308Rhinopithecus_roxellana
YNL255C-10042.308ENSSBOG00000023735-9842.308Saimiri_boliviensis_boliviensis
YNL255C-10044.872ENSSBOG00000029912ZCCHC139937.931Saimiri_boliviensis_boliviensis
YNL255C-10042.308ENSSHAG00000017132-9842.308Sarcophilus_harrisii
YNL255C-10040.000ENSSFOG00015001140cnbpb10051.220Scleropages_formosus
YNL255C-10040.769ENSSFOG00015014361cnbpa9951.220Scleropages_formosus
YNL255C-9953.659ENSSMAG00000012994cnbpa9853.659Scophthalmus_maximus
YNL255C-10053.659ENSSMAG00000006593cnbpb10053.659Scophthalmus_maximus
YNL255C-9940.769ENSSDUG00000000383cnbpa9851.220Seriola_dumerili
YNL255C-10040.769ENSSDUG00000018275cnbpb10051.220Seriola_dumerili
YNL255C-10040.769ENSSLDG00000022237cnbpb10051.220Seriola_lalandi_dorsalis
YNL255C-9940.769ENSSLDG00000011731cnbpa9851.220Seriola_lalandi_dorsalis
YNL255C-10042.308ENSSARG00000011874-9842.308Sorex_araneus
YNL255C-10042.308ENSSPUG00000018059-9842.308Sphenodon_punctatus
YNL255C-9938.750ENSSPAG00000021850cnbpb9140.580Stegastes_partitus
YNL255C-10040.769ENSSPAG00000019754cnbpa9951.220Stegastes_partitus
YNL255C-9940.000ENSSSCG00000035737ZCCHC139840.000Sus_scrofa
YNL255C-10042.308ENSSSCG00000040879-9842.308Sus_scrofa
YNL255C-8432.673ENSTGUG00000006994ZCCHC95932.673Taeniopygia_guttata
YNL255C-10042.308ENSTGUG00000004001-9842.308Taeniopygia_guttata
YNL255C-10053.659ENSTRUG00000025415cnbpa9553.659Takifugu_rubripes
YNL255C-9945.385ENSTNIG00000017940cnbpa9553.659Tetraodon_nigroviridis
YNL255C-10040.000ENSTBEG00000012620-9841.975Tupaia_belangeri
YNL255C-10042.308ENSTTRG00000015266CNBP9842.308Tursiops_truncatus
YNL255C-10046.988ENSUAMG00000018978CNBP9841.964Ursus_americanus
YNL255C-9940.870ENSUAMG00000005999ZCCHC139840.870Ursus_americanus
YNL255C-9942.857ENSUMAG00000022910-7142.857Ursus_maritimus
YNL255C-9940.870ENSUMAG00000021847ZCCHC139840.870Ursus_maritimus
YNL255C-10046.988ENSUMAG00000015120CNBP9841.964Ursus_maritimus
YNL255C-10043.846ENSVPAG00000007138CNBP9843.846Vicugna_pacos
YNL255C-9944.578ENSVVUG00000003294-6844.578Vulpes_vulpes
YNL255C-10046.429ENSVVUG00000015754ZCCHC139746.429Vulpes_vulpes
YNL255C-10042.308ENSVVUG00000018264-9842.308Vulpes_vulpes
YNL255C-10047.727ENSXETG00000025147cnbp10047.727Xenopus_tropicalis
YNL255C-9941.538ENSXCOG00000011191cnbpa9851.220Xiphophorus_couchianus
YNL255C-9941.538ENSXMAG00000024938cnbpa9851.220Xiphophorus_maculatus

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