EuRBPDB

Description

Ensembl ID: YNL286W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Putative checkpoint factor in transcription%3B binds to U2 snRNA and Prp11p%3B regulates toggling of the U2 snRNA stem II region between different structures%3B contains two RNA recognition motifs (RRMs)
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 858 bases
Position: chrXIV:95223-96080
Accession: S000005230
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YNL286W_mRNA	RRM_1	PF00076.22	2.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YNL286W_mRNA	-	858	-	YNL286W_mRNA	285 (aa)	-	P53830

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YNL286W	-	80	31.799	ENSAPLG00000012401	HTATSF1	55	32.099	Anas_platyrhynchos
YNL286W	-	76	34.529	ENSACAG00000009346	HTATSF1	54	33.186	Anolis_carolinensis
YNL286W	-	76	32.456	ENSCPBG00000026092	HTATSF1	52	32.895	Chrysemys_picta_bellii
YNL286W	-	80	31.799	ENSFALG00000003728	HTATSF1	51	32.099	Ficedula_albicollis
YNL286W	-	78	31.718	ENSGMOG00000016444	htatsf1	61	31.739	Gadus_morhua
YNL286W	-	80	31.799	ENSGALG00000006410	HTATSF1	51	32.099	Gallus_gallus
YNL286W	-	80	31.799	ENSMGAG00000003558	HTATSF1	53	32.099	Meleagris_gallopavo
YNL286W	-	76	30.531	ENSMEUG00000004133	-	51	30.973	Notamacropus_eugenii
YNL286W	-	76	30.531	ENSOANG00000011674	-	52	30.531	Ornithorhynchus_anatinus
YNL286W	-	80	31.224	ENSPSIG00000010192	HTATSF1	64	31.535	Pelodiscus_sinensis
YNL286W	-	76	33.482	ENSPNAG00000006166	htatsf1	51	33.480	Pygocentrus_nattereri
YNL286W	-	76	31.839	ENSSHAG00000006440	-	55	31.416	Sarcophilus_harrisii
YNL286W	-	78	31.278	ENSSDUG00000020002	htatsf1	51	31.278	Seriola_dumerili
YNL286W	-	85	30.556	ENSTGUG00000002099	HTATSF1	51	31.967	Taeniopygia_guttata
YNL286W	-	78	32.751	ENSTRUG00000013383	htatsf1	50	33.190	Takifugu_rubripes
YNL286W	-	76	31.250	ENSXCOG00000006912	htatsf1	50	31.278	Xiphophorus_couchianus