EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: YNR011C (Gene tree)
Gene ID: -
Gene Symbol: PRP2
Alias: RNA2
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 2631
Position: chrXIV:644320-646950
Accession: S000005294
RBP type: canonical RBP
Summary: RNA-dependent DExD/H-box ATPase%3B required for activation of spliceosome before first transesterification step in RNA splicing%3B implicated in rearranging and proofreading snRNA structure in catalytic activation of spliceosome%3B ortholog of human protein DHX16

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YNR011C_mRNA	DEAD	PF00270.29	7.6e-09	1	1
YNR011C_mRNA	HA2	PF04408.23	3.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YNR011C_mRNA	-	2631	-	YNR011C_mRNA	876 (aa)	-	P20095

Gene Model

Click here to download YNR011C's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YNR011C's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YNR011C	PRP2	74	43.091	YGL120C	PRP43	84	43.091
YNR011C	PRP2	73	37.858	YKL078W	-	87	37.858
YNR011C	PRP2	73	45.840	YKR086W	PRP16	59	45.840
YNR011C	PRP2	76	42.687	YER013W	-	56	42.687

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YNR011C	PRP2	83	47.067	ENSG00000204560	DHX16	90	46.555	Homo_sapiens
YNR011C	PRP2	70	49.351	ENSAPOG00000008825	dhx16	58	49.351	Acanthochromis_polyacanthus
YNR011C	PRP2	83	46.849	ENSAMEG00000013213	DHX16	66	46.849	Ailuropoda_melanoleuca
YNR011C	PRP2	83	48.016	ENSACIG00000021825	dhx16	67	48.016	Amphilophus_citrinellus
YNR011C	PRP2	83	47.613	ENSAOCG00000024217	dhx16	66	47.613	Amphiprion_ocellaris
YNR011C	PRP2	83	45.280	ENSAPEG00000022508	dhx16	66	45.280	Amphiprion_percula
YNR011C	PRP2	83	47.548	ENSATEG00000006665	dhx16	67	47.548	Anabas_testudineus
YNR011C	PRP2	83	47.785	ENSACAG00000010952	DHX16	66	47.785	Anolis_carolinensis
YNR011C	PRP2	83	47.147	ENSANAG00000024212	DHX16	90	46.555	Aotus_nancymaae
YNR011C	PRP2	83	47.749	ENSACLG00000010932	dhx16	72	47.749	Astatotilapia_calliptera
YNR011C	PRP2	84	47.600	ENSAMXG00000005181	dhx16	70	47.467	Astyanax_mexicanus
YNR011C	PRP2	83	46.986	ENSBTAG00000006960	DHX16	66	46.986	Bos_taurus
YNR011C	PRP2	83	49.187	WBGene00003392	mog-4	69	49.187	Caenorhabditis_elegans
YNR011C	PRP2	83	47.011	ENSCJAG00000019914	DHX16	90	46.369	Callithrix_jacchus
YNR011C	PRP2	83	46.712	ENSCAFG00000000427	DHX16	66	46.712	Canis_familiaris
YNR011C	PRP2	83	46.712	ENSCAFG00020017623	DHX16	91	46.241	Canis_lupus_dingo
YNR011C	PRP2	83	46.030	ENSCHIG00000013356	DHX16	67	46.030	Capra_hircus
YNR011C	PRP2	83	47.123	ENSTSYG00000029805	DHX16	93	46.654	Carlito_syrichta
YNR011C	PRP2	74	49.848	ENSCAPG00000000092	DHX16	69	46.414	Cavia_aperea
YNR011C	PRP2	74	49.848	ENSCPOG00000015415	DHX16	66	46.414	Cavia_porcellus
YNR011C	PRP2	83	47.011	ENSCCAG00000025435	DHX16	90	46.617	Cebus_capucinus
YNR011C	PRP2	83	46.930	ENSCATG00000021666	DHX16	91	46.629	Cercocebus_atys
YNR011C	PRP2	74	49.313	ENSCLAG00000002398	DHX16	71	46.986	Chinchilla_lanigera
YNR011C	PRP2	83	46.930	ENSCSAG00000008258	DHX16	66	46.930	Chlorocebus_sabaeus
YNR011C	PRP2	76	44.675	ENSCHOG00000001224	DHX16	77	44.675	Choloepus_hoffmanni
YNR011C	PRP2	83	48.038	ENSCPBG00000018837	DHX16	67	48.038	Chrysemys_picta_bellii
YNR011C	PRP2	62	50.273	ENSCING00000006565	-	96	50.273	Ciona_intestinalis
YNR011C	PRP2	77	50.368	ENSCSAVG00000003870	-	75	50.368	Ciona_savignyi
YNR011C	PRP2	83	46.930	ENSCANG00000043736	DHX16	90	46.629	Colobus_angolensis_palliatus
YNR011C	PRP2	83	47.541	ENSCGRG00001008329	Dhx16	66	47.541	Cricetulus_griseus_chok1gshd
YNR011C	PRP2	83	46.477	ENSCGRG00000014687	Dhx16	68	46.477	Cricetulus_griseus_crigri
YNR011C	PRP2	89	45.523	ENSCSEG00000012134	dhx16	73	45.523	Cynoglossus_semilaevis
YNR011C	PRP2	89	44.931	ENSDARG00000013150	dhx16	72	44.931	Danio_rerio
YNR011C	PRP2	83	47.397	ENSDORG00000003203	Dhx16	69	47.397	Dipodomys_ordii
YNR011C	PRP2	84	47.376	FBgn0086444	l(2)37Cb	79	47.376	Drosophila_melanogaster
YNR011C	PRP2	83	47.091	ENSETEG00000003121	DHX16	68	47.091	Echinops_telfairi
YNR011C	PRP2	81	47.679	ENSEBUG00000001802	dhx16	64	50.971	Eptatretus_burgeri
YNR011C	PRP2	83	46.648	ENSEASG00005019124	DHX16	95	49.459	Equus_asinus_asinus
YNR011C	PRP2	83	46.849	ENSECAG00000008537	DHX16	66	46.849	Equus_caballus
YNR011C	PRP2	89	44.528	ENSELUG00000015727	dhx16	73	44.528	Esox_lucius
YNR011C	PRP2	83	46.721	ENSFCAG00000007693	DHX16	66	46.721	Felis_catus
YNR011C	PRP2	83	47.260	ENSFDAG00000017458	DHX16	71	47.260	Fukomys_damarensis
YNR011C	PRP2	83	47.749	ENSFHEG00000021509	dhx16	67	47.749	Fundulus_heteroclitus
YNR011C	PRP2	83	46.185	ENSGMOG00000009282	dhx16	71	44.716	Gadus_morhua
YNR011C	PRP2	83	47.749	ENSGAFG00000014389	dhx16	68	46.785	Gambusia_affinis
YNR011C	PRP2	76	48.961	ENSGACG00000001768	dhx16	82	44.774	Gasterosteus_aculeatus
YNR011C	PRP2	83	47.678	ENSGAGG00000003115	DHX16	73	47.678	Gopherus_agassizii
YNR011C	PRP2	83	47.067	ENSGGOG00000022943	DHX16	91	46.555	Gorilla_gorilla
YNR011C	PRP2	65	52.759	ENSHBUG00000009952	dhx16	57	52.759	Haplochromis_burtoni
YNR011C	PRP2	83	47.027	ENSHGLG00000019290	DHX16	66	47.027	Heterocephalus_glaber_female
YNR011C	PRP2	83	47.162	ENSHGLG00100017127	DHX16	66	47.162	Heterocephalus_glaber_male
YNR011C	PRP2	83	46.858	ENSHCOG00000006805	dhx16	66	46.858	Hippocampus_comes
YNR011C	PRP2	83	47.973	ENSIPUG00000001025	DHX16	66	47.973	Ictalurus_punctatus
YNR011C	PRP2	83	47.260	ENSSTOG00000011881	DHX16	66	47.260	Ictidomys_tridecemlineatus
YNR011C	PRP2	83	47.397	ENSJJAG00000000186	Dhx16	72	47.397	Jaculus_jaculus
YNR011C	PRP2	83	47.743	ENSKMAG00000009246	dhx16	71	47.743	Kryptolebias_marmoratus
YNR011C	PRP2	83	45.664	ENSLBEG00000017249	dhx16	67	45.664	Labrus_bergylta
YNR011C	PRP2	68	42.326	ENSLACG00000002450	DHX16	96	42.649	Latimeria_chalumnae
YNR011C	PRP2	83	46.794	ENSLAFG00000026904	DHX16	66	46.794	Loxodonta_africana
YNR011C	PRP2	83	46.930	ENSMFAG00000003575	DHX16	90	46.629	Macaca_fascicularis
YNR011C	PRP2	83	46.930	ENSMMUG00000019960	DHX16	94	45.803	Macaca_mulatta
YNR011C	PRP2	83	46.930	ENSMNEG00000014580	DHX16	90	46.629	Macaca_nemestrina
YNR011C	PRP2	83	46.930	ENSMLEG00000043805	DHX16	90	46.629	Mandrillus_leucophaeus
YNR011C	PRP2	90	44.888	ENSMAMG00000009784	dhx16	63	52.209	Mastacembelus_armatus
YNR011C	PRP2	83	47.606	ENSMZEG00005027755	dhx16	66	47.606	Maylandia_zebra
YNR011C	PRP2	83	47.404	ENSMAUG00000001696	Dhx16	66	47.404	Mesocricetus_auratus
YNR011C	PRP2	83	46.986	ENSMICG00000014819	DHX16	94	46.029	Microcebus_murinus
YNR011C	PRP2	83	47.404	ENSMOCG00000010715	Dhx16	66	47.404	Microtus_ochrogaster
YNR011C	PRP2	83	46.794	ENSMMOG00000016621	dhx16	67	46.794	Mola_mola
YNR011C	PRP2	83	46.404	ENSMODG00000015890	DHX16	77	46.404	Monodelphis_domestica
YNR011C	PRP2	84	45.895	ENSMALG00000003384	dhx16	67	45.895	Monopterus_albus
YNR011C	PRP2	83	47.541	MGP_CAROLIEiJ_G0021538	Dhx16	71	47.541	Mus_caroli
YNR011C	PRP2	83	47.541	ENSMUSG00000024422	Dhx16	66	47.541	Mus_musculus
YNR011C	PRP2	83	47.541	MGP_PahariEiJ_G0020532	Dhx16	66	47.541	Mus_pahari
YNR011C	PRP2	83	44.399	MGP_SPRETEiJ_G0022445	Dhx16	65	44.399	Mus_spretus
YNR011C	PRP2	83	46.849	ENSMPUG00000011719	DHX16	62	46.849	Mustela_putorius_furo
YNR011C	PRP2	74	49.466	ENSMLUG00000008932	DHX16	60	49.466	Myotis_lucifugus
YNR011C	PRP2	83	46.811	ENSNGAG00000001106	Dhx16	66	46.811	Nannospalax_galili
YNR011C	PRP2	83	47.606	ENSNBRG00000005624	dhx16	67	47.606	Neolamprologus_brichardi
YNR011C	PRP2	83	46.143	ENSNLEG00000005270	DHX16	93	45.487	Nomascus_leucogenys
YNR011C	PRP2	83	46.785	ENSOPRG00000001864	DHX16	66	46.785	Ochotona_princeps
YNR011C	PRP2	60	46.442	ENSODEG00000017885	DHX16	94	46.442	Octodon_degus
YNR011C	PRP2	83	47.554	ENSONIG00000002234	dhx16	67	47.554	Oreochromis_niloticus
YNR011C	PRP2	83	46.947	ENSOCUG00000002163	DHX16	66	46.521	Oryctolagus_cuniculus
YNR011C	PRP2	77	49.631	ENSORLG00000015982	dhx16	96	46.125	Oryzias_latipes
YNR011C	PRP2	77	49.631	ENSORLG00020014134	dhx16	69	46.964	Oryzias_latipes_hni
YNR011C	PRP2	77	49.631	ENSORLG00015020617	dhx16	96	46.741	Oryzias_latipes_hsok
YNR011C	PRP2	84	47.446	ENSOMEG00000019560	dhx16	68	47.446	Oryzias_melastigma
YNR011C	PRP2	83	47.260	ENSOGAG00000008300	DHX16	66	47.260	Otolemur_garnettii
YNR011C	PRP2	83	45.342	ENSOARG00000012046	DHX16	66	45.342	Ovis_aries
YNR011C	PRP2	83	47.067	ENSPPAG00000025169	DHX16	90	46.555	Pan_paniscus
YNR011C	PRP2	83	46.721	ENSPPRG00000000329	DHX16	66	46.721	Panthera_pardus
YNR011C	PRP2	83	46.248	ENSPTIG00000010694	DHX16	66	46.248	Panthera_tigris_altaica
YNR011C	PRP2	83	47.083	ENSPTRG00000017935	DHX16	90	46.555	Pan_troglodytes
YNR011C	PRP2	60	46.629	ENSPANG00000018482	DHX16	90	46.629	Papio_anubis
YNR011C	PRP2	83	47.469	ENSPKIG00000012693	dhx16	66	47.469	Paramormyrops_kingsleyae
YNR011C	PRP2	79	45.134	ENSPSIG00000012007	DHX16	64	45.021	Pelodiscus_sinensis
YNR011C	PRP2	84	46.837	ENSPMGG00000000154	dhx16	68	46.837	Periophthalmus_magnuspinnatus
YNR011C	PRP2	83	47.541	ENSPEMG00000017508	Dhx16	66	47.541	Peromyscus_maniculatus_bairdii
YNR011C	PRP2	83	45.516	ENSPCIG00000014991	DHX16	67	45.706	Phascolarctos_cinereus
YNR011C	PRP2	83	47.820	ENSPFOG00000002575	dhx16	67	47.820	Poecilia_formosa
YNR011C	PRP2	83	47.956	ENSPLAG00000014305	dhx16	67	47.956	Poecilia_latipinna
YNR011C	PRP2	83	47.820	ENSPMEG00000006632	dhx16	69	47.814	Poecilia_mexicana
YNR011C	PRP2	83	47.613	ENSPREG00000003371	dhx16	67	47.613	Poecilia_reticulata
YNR011C	PRP2	83	46.930	ENSPPYG00000016415	DHX16	66	46.930	Pongo_abelii
YNR011C	PRP2	83	44.065	ENSPCAG00000017034	DHX16	66	44.065	Procavia_capensis
YNR011C	PRP2	83	47.123	ENSPCOG00000013298	DHX16	91	46.617	Propithecus_coquereli
YNR011C	PRP2	83	46.794	ENSPVAG00000003984	DHX16	66	46.794	Pteropus_vampyrus
YNR011C	PRP2	83	47.606	ENSPNYG00000018755	dhx16	71	47.606	Pundamilia_nyererei
YNR011C	PRP2	83	48.229	ENSPNAG00000018065	dhx16	66	48.229	Pygocentrus_nattereri
YNR011C	PRP2	83	47.268	ENSRNOG00000030157	Dhx16	61	54.440	Rattus_norvegicus
YNR011C	PRP2	83	46.930	ENSRBIG00000039655	DHX16	90	46.629	Rhinopithecus_bieti
YNR011C	PRP2	83	46.930	ENSRROG00000031909	DHX16	90	46.629	Rhinopithecus_roxellana
YNR011C	PRP2	83	47.011	ENSSBOG00000020142	DHX16	90	46.369	Saimiri_boliviensis_boliviensis
YNR011C	PRP2	83	45.703	ENSSHAG00000007234	DHX16	66	45.703	Sarcophilus_harrisii
YNR011C	PRP2	83	48.168	ENSSFOG00015019853	dhx16	66	48.168	Scleropages_formosus
YNR011C	PRP2	82	45.878	ENSSMAG00000019598	dhx16	74	45.878	Scophthalmus_maximus
YNR011C	PRP2	87	46.323	ENSSDUG00000006948	dhx16	67	47.885	Seriola_dumerili
YNR011C	PRP2	87	46.065	ENSSLDG00000012742	dhx16	67	47.613	Seriola_lalandi_dorsalis
YNR011C	PRP2	83	47.059	ENSSPUG00000015145	DHX16	66	47.059	Sphenodon_punctatus
YNR011C	PRP2	83	47.613	ENSSPAG00000012416	dhx16	63	55.283	Stegastes_partitus
YNR011C	PRP2	74	49.085	ENSSSCG00000001376	DHX16	66	46.385	Sus_scrofa
YNR011C	PRP2	88	45.038	ENSTRUG00000004927	dhx16	72	45.038	Takifugu_rubripes
YNR011C	PRP2	95	42.973	ENSTNIG00000011641	dhx16	80	42.973	Tetraodon_nigroviridis
YNR011C	PRP2	83	46.658	ENSTTRG00000008323	DHX16	66	46.658	Tursiops_truncatus
YNR011C	PRP2	83	46.301	ENSUAMG00000026299	DHX16	95	46.241	Ursus_americanus
YNR011C	PRP2	83	46.849	ENSUMAG00000019661	DHX16	62	46.849	Ursus_maritimus
YNR011C	PRP2	83	46.849	ENSVVUG00000009831	DHX16	66	46.849	Vulpes_vulpes
YNR011C	PRP2	63	46.914	ENSXETG00000024069	dhx16	55	46.914	Xenopus_tropicalis
YNR011C	PRP2	82	47.599	ENSXCOG00000003774	dhx16	69	47.599	Xiphophorus_couchianus
YNR011C	PRP2	79	48.791	ENSXMAG00000013293	dhx16	65	48.791	Xiphophorus_maculatus