EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: YNR038W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Essential protein involved in ribosome biogenesis%3B putative ATP-dependent RNA helicase of the DEAD-box protein family%3B human homolog DDX51 complements yeast dbp6 mutant
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 1890 bases
Position: chrXIV:695595-697484
Accession: S000005321
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YNR038W_mRNA	ResIII	PF04851.15	3.8e-11	1	1
YNR038W_mRNA	DEAD	PF00270.29	2.3e-44	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YNR038W_mRNA	-	1890	-	YNR038W_mRNA	629 (aa)	-	P53734

Gene Model

Click here to download YNR038W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YNR038W's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YNR038W	-	55	32.102	YMR290C	-	62	32.102
YNR038W	-	61	31.282	YHR065C	-	66	31.282

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YNR038W	-	68	31.770	ENSG00000185163	DDX51	66	31.770	Homo_sapiens
YNR038W	-	62	32.176	ENSAMEG00000013674	DDX51	73	32.176	Ailuropoda_melanoleuca
YNR038W	-	64	32.506	ENSACIG00000010201	ddx51	64	32.809	Amphilophus_citrinellus
YNR038W	-	67	32.553	ENSAOCG00000017332	ddx51	66	32.553	Amphiprion_ocellaris
YNR038W	-	67	32.836	ENSAPEG00000004829	ddx51	66	32.836	Amphiprion_percula
YNR038W	-	74	32.677	ENSATEG00000013470	ddx51	72	32.677	Anabas_testudineus
YNR038W	-	68	31.557	ENSANAG00000031596	DDX51	71	31.557	Aotus_nancymaae
YNR038W	-	68	32.839	ENSACLG00000020492	ddx51	70	32.836	Astatotilapia_calliptera
YNR038W	-	60	33.092	ENSAMXG00000001507	ddx51	55	33.894	Astyanax_mexicanus
YNR038W	-	68	31.064	ENSCJAG00000046414	DDX51	68	30.515	Callithrix_jacchus
YNR038W	-	62	32.184	ENSCAFG00000006320	DDX51	64	32.184	Canis_familiaris
YNR038W	-	62	32.000	ENSCAFG00020010492	DDX51	61	32.304	Canis_lupus_dingo
YNR038W	-	62	32.420	ENSCHIG00000014268	DDX51	64	32.037	Capra_hircus
YNR038W	-	70	30.533	ENSTSYG00000034346	DDX51	76	30.738	Carlito_syrichta
YNR038W	-	62	31.395	ENSCPOG00000023923	DDX51	62	31.382	Cavia_porcellus
YNR038W	-	71	31.911	ENSCCAG00000031005	DDX51	70	32.285	Cebus_capucinus
YNR038W	-	71	31.325	ENSCATG00000034250	DDX51	70	31.325	Cercocebus_atys
YNR038W	-	62	32.258	ENSCSAG00000001868	DDX51	63	31.626	Chlorocebus_sabaeus
YNR038W	-	68	32.083	ENSCPBG00000001164	DDX51	61	32.500	Chrysemys_picta_bellii
YNR038W	-	55	32.190	ENSCING00000000770	-	80	32.190	Ciona_intestinalis
YNR038W	-	67	30.921	ENSCSAVG00000010817	-	66	30.973	Ciona_savignyi
YNR038W	-	69	31.942	ENSCANG00000032770	DDX51	71	31.377	Colobus_angolensis_palliatus
YNR038W	-	63	32.802	ENSCGRG00001007401	Ddx51	65	32.802	Cricetulus_griseus_chok1gshd
YNR038W	-	63	32.346	ENSCGRG00000005173	Ddx51	74	32.574	Cricetulus_griseus_crigri
YNR038W	-	67	33.836	ENSCSEG00000015970	ddx51	68	33.906	Cynoglossus_semilaevis
YNR038W	-	63	34.101	ENSDARG00000025854	ddx51	62	34.404	Danio_rerio
YNR038W	-	67	30.573	ENSDNOG00000014194	DDX51	84	30.752	Dasypus_novemcinctus
YNR038W	-	62	31.746	ENSEBUG00000016425	ddx51	73	31.390	Eptatretus_burgeri
YNR038W	-	64	32.880	ENSEASG00005016622	DDX51	71	32.018	Equus_asinus_asinus
YNR038W	-	63	34.633	ENSELUG00000018602	ddx51	61	33.716	Esox_lucius
YNR038W	-	62	31.628	ENSFCAG00000010782	DDX51	62	31.628	Felis_catus
YNR038W	-	70	31.515	ENSFALG00000007216	DDX51	67	31.727	Ficedula_albicollis
YNR038W	-	62	33.486	ENSFHEG00000008807	ddx51	67	33.562	Fundulus_heteroclitus
YNR038W	-	60	30.549	ENSGMOG00000012614	ddx51	63	30.641	Gadus_morhua
YNR038W	-	70	30.584	ENSGALG00000032690	DDX51	73	31.158	Gallus_gallus
YNR038W	-	60	31.175	ENSGAFG00000019988	ddx51	63	30.269	Gambusia_affinis
YNR038W	-	67	32.409	ENSGACG00000012252	ddx51	67	32.623	Gasterosteus_aculeatus
YNR038W	-	68	31.875	ENSGAGG00000009833	DDX51	61	31.875	Gopherus_agassizii
YNR038W	-	68	31.343	ENSGGOG00000010250	DDX51	71	31.343	Gorilla_gorilla
YNR038W	-	68	32.906	ENSHBUG00000007532	ddx51	71	32.553	Haplochromis_burtoni
YNR038W	-	62	31.702	ENSHGLG00000009892	DDX51	59	31.690	Heterocephalus_glaber_female
YNR038W	-	66	32.969	ENSHCOG00000016131	ddx51	64	32.969	Hippocampus_comes
YNR038W	-	63	32.864	ENSIPUG00000009240	ddx51	60	33.178	Ictalurus_punctatus
YNR038W	-	62	31.481	ENSSTOG00000023762	DDX51	68	31.713	Ictidomys_tridecemlineatus
YNR038W	-	63	33.484	ENSKMAG00000019797	ddx51	63	33.784	Kryptolebias_marmoratus
YNR038W	-	67	33.120	ENSLBEG00000025627	ddx51	67	33.191	Labrus_bergylta
YNR038W	-	64	30.769	ENSLACG00000011076	DDX51	60	31.519	Latimeria_chalumnae
YNR038W	-	69	32.700	ENSLOCG00000006858	ddx51	59	34.028	Lepisosteus_oculatus
YNR038W	-	71	31.377	ENSMFAG00000031189	DDX51	70	31.377	Macaca_fascicularis
YNR038W	-	71	31.174	ENSMNEG00000032293	DDX51	70	31.174	Macaca_nemestrina
YNR038W	-	64	33.482	ENSMAMG00000001462	ddx51	62	33.482	Mastacembelus_armatus
YNR038W	-	68	32.839	ENSMZEG00005012591	ddx51	70	32.836	Maylandia_zebra
YNR038W	-	70	30.444	ENSMGAG00000007549	DDX51	78	31.013	Meleagris_gallopavo
YNR038W	-	63	33.030	ENSMAUG00000012100	Ddx51	65	33.030	Mesocricetus_auratus
YNR038W	-	61	30.679	ENSMICG00000037047	DDX51	62	30.679	Microcebus_murinus
YNR038W	-	64	30.804	ENSMODG00000015355	DDX51	67	30.804	Monodelphis_domestica
YNR038W	-	67	33.120	ENSMALG00000013852	ddx51	67	33.120	Monopterus_albus
YNR038W	-	64	32.135	ENSMUSG00000029504	Ddx51	77	30.326	Mus_musculus
YNR038W	-	75	31.238	MGP_PahariEiJ_G0024131	Ddx51	77	31.238	Mus_pahari
YNR038W	-	64	32.809	MGP_SPRETEiJ_G0028547	Ddx51	77	30.902	Mus_spretus
YNR038W	-	62	31.713	ENSMPUG00000002384	DDX51	81	31.250	Mustela_putorius_furo
YNR038W	-	64	31.778	ENSNGAG00000020870	Ddx51	65	31.778	Nannospalax_galili
YNR038W	-	68	32.839	ENSNBRG00000013764	ddx51	70	32.836	Neolamprologus_brichardi
YNR038W	-	68	31.780	ENSNLEG00000008548	-	79	31.006	Nomascus_leucogenys
YNR038W	-	62	31.395	ENSMEUG00000004004	DDX51	69	31.395	Notamacropus_eugenii
YNR038W	-	62	32.319	ENSODEG00000009622	DDX51	70	32.311	Octodon_degus
YNR038W	-	68	33.475	ENSONIG00000001627	ddx51	65	33.475	Oreochromis_niloticus
YNR038W	-	68	31.692	ENSOANG00000012187	DDX51	67	31.478	Ornithorhynchus_anatinus
YNR038W	-	65	33.408	ENSORLG00000017814	ddx51	66	32.658	Oryzias_latipes
YNR038W	-	65	33.408	ENSORLG00020016405	ddx51	66	33.184	Oryzias_latipes_hni
YNR038W	-	65	33.408	ENSORLG00015014512	ddx51	66	33.184	Oryzias_latipes_hsok
YNR038W	-	65	34.375	ENSOMEG00000001919	ddx51	76	32.370	Oryzias_melastigma
YNR038W	-	62	31.944	ENSOGAG00000030755	DDX51	60	31.944	Otolemur_garnettii
YNR038W	-	67	31.974	ENSPPAG00000028768	DDX51	67	31.974	Pan_paniscus
YNR038W	-	60	31.754	ENSPPRG00000015010	DDX51	69	31.280	Panthera_pardus
YNR038W	-	68	31.557	ENSPTRG00000005647	DDX51	67	31.557	Pan_troglodytes
YNR038W	-	71	31.124	ENSPANG00000008107	DDX51	70	31.124	Papio_anubis
YNR038W	-	64	34.694	ENSPKIG00000022075	ddx51	64	34.234	Paramormyrops_kingsleyae
YNR038W	-	64	31.858	ENSPSIG00000003736	DDX51	85	31.789	Pelodiscus_sinensis
YNR038W	-	59	30.383	ENSPCIG00000005052	DDX51	60	30.383	Phascolarctos_cinereus
YNR038W	-	63	31.674	ENSPFOG00000008508	ddx51	63	31.614	Poecilia_formosa
YNR038W	-	71	31.723	ENSPLAG00000023669	ddx51	64	32.949	Poecilia_latipinna
YNR038W	-	63	31.674	ENSPMEG00000011299	ddx51	63	31.614	Poecilia_mexicana
YNR038W	-	71	31.328	ENSPREG00000015992	ddx51	70	31.276	Poecilia_reticulata
YNR038W	-	75	30.502	ENSPPYG00000005135	DDX51	75	30.502	Pongo_abelii
YNR038W	-	62	30.858	ENSPCOG00000019597	DDX51	64	30.045	Propithecus_coquereli
YNR038W	-	64	31.236	ENSPVAG00000000454	DDX51	66	30.889	Pteropus_vampyrus
YNR038W	-	62	33.100	ENSPNAG00000017430	ddx51	59	33.643	Pygocentrus_nattereri
YNR038W	-	64	32.658	ENSRNOG00000037480	Ddx51	66	32.207	Rattus_norvegicus
YNR038W	-	68	31.557	ENSRROG00000029937	DDX51	73	30.847	Rhinopithecus_roxellana
YNR038W	-	70	31.198	ENSSBOG00000018712	DDX51	81	30.709	Saimiri_boliviensis_boliviensis
YNR038W	-	62	31.264	ENSSHAG00000011696	DDX51	58	31.264	Sarcophilus_harrisii
YNR038W	-	65	33.557	ENSSFOG00015002636	ddx51	68	34.521	Scleropages_formosus
YNR038W	-	67	32.403	ENSSMAG00000018065	ddx51	66	32.403	Scophthalmus_maximus
YNR038W	-	75	32.129	ENSSDUG00000001495	ddx51	74	32.129	Seriola_dumerili
YNR038W	-	67	33.263	ENSSLDG00000006541	ddx51	71	31.939	Seriola_lalandi_dorsalis
YNR038W	-	72	32.329	ENSSPUG00000015618	DDX51	72	32.329	Sphenodon_punctatus
YNR038W	-	67	32.623	ENSSPAG00000019759	ddx51	65	32.623	Stegastes_partitus
YNR038W	-	66	32.766	ENSTGUG00000010243	DDX51	90	32.696	Taeniopygia_guttata
YNR038W	-	67	31.263	ENSTRUG00000012670	ddx51	67	31.343	Takifugu_rubripes
YNR038W	-	65	33.480	ENSTNIG00000010281	ddx51	85	30.837	Tetraodon_nigroviridis
YNR038W	-	58	34.104	ENSTBEG00000006060	DDX51	81	34.104	Tupaia_belangeri
YNR038W	-	62	31.279	ENSUMAG00000002652	DDX51	64	31.264	Ursus_maritimus
YNR038W	-	62	32.644	ENSVVUG00000004382	DDX51	69	32.639	Vulpes_vulpes
YNR038W	-	64	32.054	ENSXETG00000022359	ddx51	63	32.444	Xenopus_tropicalis
YNR038W	-	70	31.148	ENSXCOG00000003043	ddx51	68	31.224	Xiphophorus_couchianus
YNR038W	-	70	31.148	ENSXMAG00000010009	ddx51	69	31.148	Xiphophorus_maculatus