EuRBPDB

Description

Ensembl ID: YNR046W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 408
Position: chrXIV:707788-708195
Accession: S000005329
RBP type: canonical RBP
Summary: Protein involved in methylation of tRNA%2C rRNA%2C and translation factors%3B also involved in ribosome biogenesis%3B subunit of tRNA methyltransferase (MTase) complexes in combination with Trm9p and Trm11p%3B N7-methylates G1575 of 18S rRNA as complex with Bud23p%3B subunit of complex with Mtq2p that methylates Sup45p (eRF1) in the ternary complex eRF1-eRF3-GTP%3B relative distribution to the nucleus increases upon DNA replication stress%3B functional homolog of human TRMT112

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YNR046W_mRNA	Trm112p	PF03966.16	3.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YNR046W_mRNA	-	408	-	YNR046W_mRNA	135 (aa)	-	P53738

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YNR046W	-	96	32.308	ENSACAG00000027822	TRMT112	96	32.308	Anolis_carolinensis
YNR046W	-	96	30.769	ENSCSAVG00000005434	-	90	30.769	Ciona_savignyi
YNR046W	-	96	30.000	ENSCSEG00000005744	trmt112	96	30.000	Cynoglossus_semilaevis
YNR046W	-	96	33.835	FBgn0037061	CG12975	96	33.083	Drosophila_melanogaster
YNR046W	-	96	30.075	ENSELUG00000008404	trmt112	96	30.075	Esox_lucius
YNR046W	-	96	31.538	ENSIPUG00000019865	trmt112	96	31.538	Ictalurus_punctatus
YNR046W	-	96	31.818	ENSLACG00000017896	TRMT112	96	31.818	Latimeria_chalumnae
YNR046W	-	96	30.769	ENSMALG00000011844	trmt112	96	30.769	Monopterus_albus
YNR046W	-	96	31.061	ENSPKIG00000025257	trmt112	96	31.061	Paramormyrops_kingsleyae
YNR046W	-	96	30.534	ENSPSIG00000016819	TRMT112	96	30.534	Pelodiscus_sinensis
YNR046W	-	96	30.769	ENSPMGG00000004948	trmt112	96	30.769	Periophthalmus_magnuspinnatus
YNR046W	-	96	30.303	ENSPMAG00000004763	trmt112	96	30.303	Petromyzon_marinus
YNR046W	-	96	32.308	ENSTRUG00000013253	trmt112	96	32.308	Takifugu_rubripes