EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: YNR053C (Gene tree)
Gene ID: -
Gene Symbol: NOG2
Alias: NUG2
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 1993
Position: chrXIV:721120-723112
Accession: S000005336
RBP type: canonical RBP
Summary: Putative GTPase%3B associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation%3B recruited by ribosomal proteins L17%2C L35%2C and L37 to assembling ribosomes after 27SB pre-rRNA is generated%2C immediately preceding removal of ITS2

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YNR053C_mRNA	MMR_HSR1	PF01926.23	2.5e-18	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YNR053C_mRNA	-	1461	-	YNR053C_mRNA	486 (aa)	-	P53742

Gene Model

Click here to download YNR053C's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YNR053C's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YNR053C	NOG2	54	32.323	YER006W	-	57	32.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YNR053C	NOG2	92	55.778	ENSG00000134697	GNL2	99	62.000	Homo_sapiens
YNR053C	NOG2	93	57.837	ENSAPOG00000024507	gnl2	63	58.014	Acanthochromis_polyacanthus
YNR053C	NOG2	92	56.000	ENSAMEG00000001032	GNL2	59	56.081	Ailuropoda_melanoleuca
YNR053C	NOG2	93	56.733	ENSACIG00000018346	gnl2	60	57.111	Amphilophus_citrinellus
YNR053C	NOG2	93	57.837	ENSAOCG00000014396	gnl2	62	58.014	Amphiprion_ocellaris
YNR053C	NOG2	93	57.837	ENSAPEG00000005375	gnl2	59	58.014	Amphiprion_percula
YNR053C	NOG2	93	57.860	ENSATEG00000009311	gnl2	63	58.036	Anabas_testudineus
YNR053C	NOG2	92	55.211	ENSAPLG00000006508	GNL2	61	55.281	Anas_platyrhynchos
YNR053C	NOG2	95	55.076	ENSACAG00000017224	GNL2	60	56.208	Anolis_carolinensis
YNR053C	NOG2	93	55.263	ENSANAG00000023449	GNL2	59	55.856	Aotus_nancymaae
YNR053C	NOG2	90	56.561	ENSAMXG00000020288	gnl2	64	56.433	Astyanax_mexicanus
YNR053C	NOG2	91	55.679	ENSBTAG00000003849	GNL2	60	55.679	Bos_taurus
YNR053C	NOG2	96	52.452	WBGene00003596	ngp-1	70	54.439	Caenorhabditis_elegans
YNR053C	NOG2	93	54.825	ENSCJAG00000001980	GNL2	59	55.405	Callithrix_jacchus
YNR053C	NOG2	92	56.000	ENSCAFG00000003289	GNL2	59	56.081	Canis_familiaris
YNR053C	NOG2	92	56.222	ENSCAFG00020008050	GNL2	60	56.306	Canis_lupus_dingo
YNR053C	NOG2	91	55.580	ENSCHIG00000015731	GNL2	61	55.580	Capra_hircus
YNR053C	NOG2	92	55.556	ENSTSYG00000004537	GNL2	60	55.631	Carlito_syrichta
YNR053C	NOG2	92	47.778	ENSCAPG00000017481	GNL2	62	47.748	Cavia_aperea
YNR053C	NOG2	92	55.778	ENSCPOG00000026804	GNL2	61	55.856	Cavia_porcellus
YNR053C	NOG2	93	55.044	ENSCCAG00000034952	GNL2	59	55.631	Cebus_capucinus
YNR053C	NOG2	93	55.044	ENSCATG00000026503	GNL2	59	55.631	Cercocebus_atys
YNR053C	NOG2	92	55.432	ENSCLAG00000012504	GNL2	59	55.631	Chinchilla_lanigera
YNR053C	NOG2	93	55.044	ENSCSAG00000001110	GNL2	59	55.631	Chlorocebus_sabaeus
YNR053C	NOG2	96	54.604	ENSCPBG00000018483	GNL2	60	55.756	Chrysemys_picta_bellii
YNR053C	NOG2	93	56.140	ENSCING00000010696	-	82	56.071	Ciona_intestinalis
YNR053C	NOG2	93	47.300	ENSCSAVG00000001583	-	64	46.983	Ciona_savignyi
YNR053C	NOG2	93	53.422	ENSCANG00000036748	GNL2	59	53.968	Colobus_angolensis_palliatus
YNR053C	NOG2	93	55.044	ENSCGRG00001016733	Gnl2	59	55.631	Cricetulus_griseus_chok1gshd
YNR053C	NOG2	93	55.044	ENSCGRG00000017418	Gnl2	59	55.631	Cricetulus_griseus_crigri
YNR053C	NOG2	93	56.987	ENSCSEG00000020296	gnl2	65	56.733	Cynoglossus_semilaevis
YNR053C	NOG2	76	60.490	ENSCVAG00000017712	gnl2	56	60.724	Cyprinodon_variegatus
YNR053C	NOG2	94	55.870	ENSDARG00000098080	gnl2	92	75.758	Danio_rerio
YNR053C	NOG2	91	55.405	ENSDNOG00000033314	-	60	55.405	Dasypus_novemcinctus
YNR053C	NOG2	91	55.631	ENSDNOG00000016466	-	59	55.631	Dasypus_novemcinctus
YNR053C	NOG2	81	57.868	ENSDORG00000014429	Gnl2	53	57.990	Dipodomys_ordii
YNR053C	NOG2	94	52.061	FBgn0034243	Ns2	64	52.466	Drosophila_melanogaster
YNR053C	NOG2	93	51.535	ENSETEG00000016674	GNL2	69	52.027	Echinops_telfairi
YNR053C	NOG2	90	55.708	ENSEBUG00000005300	gnl2	66	55.708	Eptatretus_burgeri
YNR053C	NOG2	91	55.631	ENSEASG00005012227	GNL2	59	55.631	Equus_asinus_asinus
YNR053C	NOG2	93	55.263	ENSECAG00000008068	GNL2	59	55.856	Equus_caballus
YNR053C	NOG2	93	49.781	ENSEEUG00000011345	GNL2	60	50.225	Erinaceus_europaeus
YNR053C	NOG2	93	55.629	ENSELUG00000000675	gnl2	62	56.236	Esox_lucius
YNR053C	NOG2	93	55.850	ENSFCAG00000008760	GNL2	60	56.081	Felis_catus
YNR053C	NOG2	93	55.727	ENSFALG00000000909	GNL2	60	55.804	Ficedula_albicollis
YNR053C	NOG2	93	55.044	ENSFDAG00000013274	GNL2	60	55.631	Fukomys_damarensis
YNR053C	NOG2	54	68.561	ENSFHEG00000022857	gnl2	50	69.600	Fundulus_heteroclitus
YNR053C	NOG2	95	56.503	ENSGMOG00000004427	gnl2	65	57.788	Gadus_morhua
YNR053C	NOG2	93	55.947	ENSGALG00000001973	GNL2	55	56.208	Gallus_gallus
YNR053C	NOG2	94	57.576	ENSGAFG00000008794	gnl2	69	57.812	Gambusia_affinis
YNR053C	NOG2	94	56.674	ENSGACG00000013692	gnl2	68	57.944	Gasterosteus_aculeatus
YNR053C	NOG2	79	56.806	ENSGAGG00000003905	GNL2	57	57.650	Gopherus_agassizii
YNR053C	NOG2	92	56.000	ENSGGOG00000007704	GNL2	59	56.081	Gorilla_gorilla
YNR053C	NOG2	95	48.164	ENSHGLG00000007433	-	63	48.559	Heterocephalus_glaber_female
YNR053C	NOG2	91	55.928	ENSHGLG00000013728	GNL2	59	55.856	Heterocephalus_glaber_female
YNR053C	NOG2	91	55.928	ENSHGLG00100002593	GNL2	59	55.856	Heterocephalus_glaber_male
YNR053C	NOG2	69	54.000	ENSHGLG00100016036	-	52	54.000	Heterocephalus_glaber_male
YNR053C	NOG2	95	48.164	ENSHGLG00100001365	-	63	48.559	Heterocephalus_glaber_male
YNR053C	NOG2	92	53.333	ENSHCOG00000012109	gnl2	58	53.378	Hippocampus_comes
YNR053C	NOG2	94	56.739	ENSIPUG00000017079	gnl2	62	57.143	Ictalurus_punctatus
YNR053C	NOG2	92	55.778	ENSSTOG00000005217	GNL2	59	55.856	Ictidomys_tridecemlineatus
YNR053C	NOG2	93	55.482	ENSJJAG00000010798	Gnl2	59	55.856	Jaculus_jaculus
YNR053C	NOG2	94	56.087	ENSKMAG00000018855	gnl2	63	56.726	Kryptolebias_marmoratus
YNR053C	NOG2	93	57.837	ENSLBEG00000008518	gnl2	62	58.239	Labrus_bergylta
YNR053C	NOG2	95	54.526	ENSLACG00000016998	GNL2	61	55.819	Latimeria_chalumnae
YNR053C	NOG2	93	55.263	ENSLAFG00000018723	GNL2	57	60.472	Loxodonta_africana
YNR053C	NOG2	93	55.044	ENSMFAG00000039033	GNL2	59	55.631	Macaca_fascicularis
YNR053C	NOG2	93	55.044	ENSMMUG00000008419	GNL2	59	55.631	Macaca_mulatta
YNR053C	NOG2	93	55.044	ENSMNEG00000043438	GNL2	59	55.631	Macaca_nemestrina
YNR053C	NOG2	93	51.860	ENSMLEG00000044421	GNL2	58	52.360	Mandrillus_leucophaeus
YNR053C	NOG2	93	56.733	ENSMAMG00000007823	gnl2	62	57.111	Mastacembelus_armatus
YNR053C	NOG2	93	56.044	ENSMZEG00005007393	gnl2	61	55.982	Maylandia_zebra
YNR053C	NOG2	90	56.751	ENSMZEG00005008412	GNL2	63	56.751	Maylandia_zebra
YNR053C	NOG2	92	52.088	ENSMGAG00000003267	GNL2	59	52.232	Meleagris_gallopavo
YNR053C	NOG2	93	54.825	ENSMAUG00000018529	Gnl2	59	55.405	Mesocricetus_auratus
YNR053C	NOG2	94	54.585	ENSMOCG00000016365	Gnl2	71	55.305	Microtus_ochrogaster
YNR053C	NOG2	93	57.174	ENSMMOG00000018551	gnl2	65	57.788	Mola_mola
YNR053C	NOG2	92	55.679	ENSMODG00000017773	GNL2	60	55.756	Monodelphis_domestica
YNR053C	NOG2	95	56.681	ENSMALG00000011736	gnl2	62	57.143	Monopterus_albus
YNR053C	NOG2	92	55.778	MGP_CAROLIEiJ_G0026458	Gnl2	59	55.856	Mus_caroli
YNR053C	NOG2	92	55.778	ENSMUSG00000028869	Gnl2	59	55.856	Mus_musculus
YNR053C	NOG2	93	55.044	MGP_PahariEiJ_G0028789	Gnl2	59	55.631	Mus_pahari
YNR053C	NOG2	92	55.778	MGP_SPRETEiJ_G0027437	Gnl2	59	55.856	Mus_spretus
YNR053C	NOG2	92	56.222	ENSMPUG00000014709	GNL2	59	56.306	Mustela_putorius_furo
YNR053C	NOG2	93	55.507	ENSMLUG00000017139	GNL2	59	55.982	Myotis_lucifugus
YNR053C	NOG2	93	55.482	ENSNGAG00000005990	Gnl2	59	56.081	Nannospalax_galili
YNR053C	NOG2	93	56.360	ENSNBRG00000010291	gnl2	62	56.813	Neolamprologus_brichardi
YNR053C	NOG2	92	55.778	ENSNLEG00000011599	GNL2	59	55.856	Nomascus_leucogenys
YNR053C	NOG2	92	48.330	ENSMEUG00000015141	GNL2	64	48.307	Notamacropus_eugenii
YNR053C	NOG2	92	54.889	ENSOANG00000002057	GNL2	58	54.955	Ornithorhynchus_anatinus
YNR053C	NOG2	91	56.081	ENSOCUG00000010877	GNL2	59	56.081	Oryctolagus_cuniculus
YNR053C	NOG2	92	57.871	ENSORLG00000014645	gnl2	62	58.014	Oryzias_latipes
YNR053C	NOG2	93	57.237	ENSORLG00020018867	gnl2	61	57.788	Oryzias_latipes_hni
YNR053C	NOG2	93	57.456	ENSORLG00015003936	gnl2	61	58.014	Oryzias_latipes_hsok
YNR053C	NOG2	93	58.242	ENSOMEG00000019611	gnl2	61	58.239	Oryzias_melastigma
YNR053C	NOG2	91	53.378	ENSOGAG00000008643	GNL2	59	53.378	Otolemur_garnettii
YNR053C	NOG2	91	55.580	ENSOARG00000019788	GNL2	60	55.580	Ovis_aries
YNR053C	NOG2	92	55.778	ENSPPAG00000001559	GNL2	54	55.856	Pan_paniscus
YNR053C	NOG2	93	55.850	ENSPPRG00000010528	GNL2	60	56.081	Panthera_pardus
YNR053C	NOG2	93	55.850	ENSPTIG00000015095	GNL2	60	56.081	Panthera_tigris_altaica
YNR053C	NOG2	92	55.457	ENSPTRG00000000549	GNL2	59	55.530	Pan_troglodytes
YNR053C	NOG2	93	55.044	ENSPANG00000025285	GNL2	59	55.631	Papio_anubis
YNR053C	NOG2	92	57.111	ENSPKIG00000005438	gnl2	60	58.473	Paramormyrops_kingsleyae
YNR053C	NOG2	92	55.011	ENSPSIG00000007800	GNL2	62	55.841	Pelodiscus_sinensis
YNR053C	NOG2	94	53.261	ENSPMGG00000002306	gnl2	62	53.348	Periophthalmus_magnuspinnatus
YNR053C	NOG2	93	55.044	ENSPEMG00000021234	Gnl2	59	55.631	Peromyscus_maniculatus_bairdii
YNR053C	NOG2	95	55.508	ENSPMAG00000000974	gnl2	58	56.659	Petromyzon_marinus
YNR053C	NOG2	92	55.011	ENSPCIG00000000135	GNL2	60	55.079	Phascolarctos_cinereus
YNR053C	NOG2	95	57.940	ENSPFOG00000012893	gnl2	59	58.691	Poecilia_formosa
YNR053C	NOG2	94	58.351	ENSPLAG00000012483	gnl2	61	59.132	Poecilia_latipinna
YNR053C	NOG2	94	58.134	ENSPMEG00000019133	gnl2	61	58.904	Poecilia_mexicana
YNR053C	NOG2	94	58.009	ENSPREG00000005988	gnl2	64	58.465	Poecilia_reticulata
YNR053C	NOG2	92	55.778	ENSPPYG00000001529	GNL2	59	55.856	Pongo_abelii
YNR053C	NOG2	91	55.856	ENSPCOG00000016681	GNL2	59	55.856	Propithecus_coquereli
YNR053C	NOG2	93	56.455	ENSPNAG00000005426	gnl2	63	56.696	Pygocentrus_nattereri
YNR053C	NOG2	93	55.385	ENSRNOG00000009430	Gnl2	59	55.982	Rattus_norvegicus
YNR053C	NOG2	93	55.044	ENSRBIG00000038390	GNL2	61	55.631	Rhinopithecus_bieti
YNR053C	NOG2	93	55.044	ENSRROG00000014347	GNL2	59	55.631	Rhinopithecus_roxellana
YNR053C	NOG2	93	54.825	ENSSBOG00000020194	GNL2	59	55.405	Saimiri_boliviensis_boliviensis
YNR053C	NOG2	91	56.278	ENSSHAG00000012267	GNL2	60	56.208	Sarcophilus_harrisii
YNR053C	NOG2	93	56.798	ENSSFOG00015020300	gnl2	60	57.562	Scleropages_formosus
YNR053C	NOG2	94	56.304	ENSSMAG00000003472	gnl2	63	56.885	Scophthalmus_maximus
YNR053C	NOG2	94	57.112	ENSSDUG00000010382	gnl2	63	57.494	Seriola_dumerili
YNR053C	NOG2	94	57.019	ENSSLDG00000003122	gnl2	62	57.812	Seriola_lalandi_dorsalis
YNR053C	NOG2	91	55.856	ENSSARG00000011342	GNL2	59	55.856	Sorex_araneus
YNR053C	NOG2	93	54.405	ENSSPUG00000003826	GNL2	60	54.853	Sphenodon_punctatus
YNR053C	NOG2	93	57.895	ENSSPAG00000017473	gnl2	62	58.239	Stegastes_partitus
YNR053C	NOG2	93	55.482	ENSSSCG00000031631	GNL2	59	56.081	Sus_scrofa
YNR053C	NOG2	95	54.797	ENSTGUG00000001547	GNL2	60	56.027	Taeniopygia_guttata
YNR053C	NOG2	94	56.522	ENSTRUG00000009789	gnl2	61	56.920	Takifugu_rubripes
YNR053C	NOG2	94	56.739	ENSTNIG00000003733	gnl2	60	57.143	Tetraodon_nigroviridis
YNR053C	NOG2	76	66.909	ENSTBEG00000003443	GNL2	50	67.286	Tupaia_belangeri
YNR053C	NOG2	95	55.246	ENSTTRG00000008600	GNL2	61	55.824	Tursiops_truncatus
YNR053C	NOG2	92	56.000	ENSUAMG00000014123	GNL2	59	56.081	Ursus_americanus
YNR053C	NOG2	92	53.778	ENSUMAG00000000413	GNL2	60	53.153	Ursus_maritimus
YNR053C	NOG2	91	51.351	ENSVPAG00000001579	GNL2	58	51.351	Vicugna_pacos
YNR053C	NOG2	92	56.222	ENSVVUG00000023157	GNL2	59	56.306	Vulpes_vulpes
YNR053C	NOG2	93	55.066	ENSXETG00000002161	gnl2	62	55.134	Xenopus_tropicalis
YNR053C	NOG2	93	56.140	ENSXCOG00000001649	gnl2	61	56.659	Xiphophorus_couchianus
YNR053C	NOG2	93	57.768	ENSXMAG00000026406	-	90	58.014	Xiphophorus_maculatus
YNR053C	NOG2	93	57.768	ENSXMAG00000014898	gnl2	64	58.014	Xiphophorus_maculatus