EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YOL010W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 1104
Position: chrXV:307938-309041
Accession: S000005370
RBP type: canonical RBP
Summary: Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis%3B subunit of U3-containing 90S preribosome processome complex involved in small ribosomal subunit assembly%3B stimulates Bms1p GTPase and U3 binding activity%3B similar to RNA cyclase-like proteins but no cyclase activity detected

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YOL010W_mRNA	RTC	PF01137.21	7.6e-45	1	1
YOL010W_mRNA	RTC_insert	PF05189.13	3.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YOL010W_mRNA	-	1104	-	YOL010W_mRNA	367 (aa)	-	Q08096

Gene Model

Click here to download YOL010W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YOL010W's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YOL010W	-	97	35.310	ENSG00000120158	RCL1	98	36.486	Homo_sapiens
YOL010W	-	99	37.701	ENSAPOG00000015666	rcl1	99	37.701	Acanthochromis_polyacanthus
YOL010W	-	97	36.170	ENSAMEG00000002631	RCL1	98	36.216	Ailuropoda_melanoleuca
YOL010W	-	97	37.027	ENSACIG00000021195	rcl1	98	37.027	Amphilophus_citrinellus
YOL010W	-	99	37.534	ENSAOCG00000002223	rcl1	99	37.534	Amphiprion_ocellaris
YOL010W	-	99	37.968	ENSAPEG00000006905	rcl1	99	37.968	Amphiprion_percula
YOL010W	-	97	38.420	ENSATEG00000020026	rcl1	98	38.420	Anabas_testudineus
YOL010W	-	87	34.954	ENSAPLG00000006031	RCL1	99	34.954	Anas_platyrhynchos
YOL010W	-	97	36.702	ENSACAG00000003640	RCL1	98	36.702	Anolis_carolinensis
YOL010W	-	97	35.310	ENSANAG00000037372	RCL1	98	36.757	Aotus_nancymaae
YOL010W	-	97	37.297	ENSACLG00000021724	rcl1	98	37.297	Astatotilapia_calliptera
YOL010W	-	97	37.534	ENSAMXG00000033394	rcl1	99	37.534	Astyanax_mexicanus
YOL010W	-	97	34.127	WBGene00022852	ZK1127.5	98	34.127	Caenorhabditis_elegans
YOL010W	-	97	35.580	ENSCJAG00000011202	RCL1	98	36.757	Callithrix_jacchus
YOL010W	-	97	36.216	ENSCAFG00000002091	RCL1	98	36.216	Canis_familiaris
YOL010W	-	97	36.216	ENSCAFG00020000638	RCL1	76	36.216	Canis_lupus_dingo
YOL010W	-	97	38.043	ENSCHIG00000012407	RCL1	98	38.043	Capra_hircus
YOL010W	-	87	32.733	ENSTSYG00000009592	RCL1	99	31.579	Carlito_syrichta
YOL010W	-	97	37.228	ENSCPOG00000015354	RCL1	98	37.228	Cavia_porcellus
YOL010W	-	97	35.310	ENSCCAG00000033505	RCL1	98	36.486	Cebus_capucinus
YOL010W	-	97	35.580	ENSCATG00000034721	RCL1	98	36.757	Cercocebus_atys
YOL010W	-	97	36.757	ENSCLAG00000007445	RCL1	98	36.757	Chinchilla_lanigera
YOL010W	-	97	35.310	ENSCSAG00000008811	RCL1	98	36.486	Chlorocebus_sabaeus
YOL010W	-	72	31.111	ENSCHOG00000007216	RCL1	83	34.191	Choloepus_hoffmanni
YOL010W	-	99	37.533	ENSCPBG00000025481	RCL1	94	36.391	Chrysemys_picta_bellii
YOL010W	-	97	37.127	ENSCING00000019565	-	97	37.127	Ciona_intestinalis
YOL010W	-	97	36.486	ENSCANG00000027099	RCL1	98	36.486	Colobus_angolensis_palliatus
YOL010W	-	97	35.638	ENSCGRG00001013748	Rcl1	98	35.676	Cricetulus_griseus_chok1gshd
YOL010W	-	87	33.923	ENSCGRG00000005843	Rcl1	99	33.934	Cricetulus_griseus_crigri
YOL010W	-	97	38.378	ENSCSEG00000000712	rcl1	96	38.378	Cynoglossus_semilaevis
YOL010W	-	97	38.753	ENSCVAG00000011536	rcl1	98	38.753	Cyprinodon_variegatus
YOL010W	-	97	38.525	ENSDARG00000038312	rcl1	99	38.525	Danio_rerio
YOL010W	-	70	31.227	ENSDNOG00000019911	RCL1	99	32.877	Dasypus_novemcinctus
YOL010W	-	97	35.772	ENSDORG00000015645	Rcl1	97	35.772	Dipodomys_ordii
YOL010W	-	97	31.915	FBgn0020909	Rtc1	97	32.804	Drosophila_melanogaster
YOL010W	-	99	33.957	ENSEBUG00000016621	-	99	33.957	Eptatretus_burgeri
YOL010W	-	97	36.685	ENSEASG00005010653	RCL1	98	36.685	Equus_asinus_asinus
YOL010W	-	97	36.413	ENSECAG00000015973	RCL1	98	36.413	Equus_caballus
YOL010W	-	82	34.304	ENSEEUG00000009801	RCL1	89	34.304	Erinaceus_europaeus
YOL010W	-	97	36.785	ENSELUG00000007353	rcl1	98	36.785	Esox_lucius
YOL010W	-	97	35.135	ENSFCAG00000014557	RCL1	98	35.598	Felis_catus
YOL010W	-	95	35.833	ENSFALG00000010553	RCL1	94	35.833	Ficedula_albicollis
YOL010W	-	87	34.940	ENSFDAG00000004209	RCL1	99	34.940	Fukomys_damarensis
YOL010W	-	97	38.649	ENSFHEG00000011228	rcl1	98	38.649	Fundulus_heteroclitus
YOL010W	-	96	36.413	ENSGMOG00000004677	rcl1	97	36.413	Gadus_morhua
YOL010W	-	99	37.831	ENSGALG00000015024	RCL1	99	37.831	Gallus_gallus
YOL010W	-	97	38.587	ENSGAFG00000007257	rcl1	98	38.587	Gambusia_affinis
YOL010W	-	97	36.585	ENSGACG00000017474	rcl1	98	36.585	Gasterosteus_aculeatus
YOL010W	-	97	38.315	ENSGAGG00000003689	RCL1	98	38.315	Gopherus_agassizii
YOL010W	-	97	35.040	ENSGGOG00000015041	RCL1	98	36.216	Gorilla_gorilla
YOL010W	-	97	37.127	ENSHBUG00000001393	rcl1	98	37.127	Haplochromis_burtoni
YOL010W	-	97	36.486	ENSHGLG00000016452	RCL1	98	36.486	Heterocephalus_glaber_female
YOL010W	-	97	32.791	ENSHGLG00000005368	-	97	32.791	Heterocephalus_glaber_female
YOL010W	-	87	34.337	ENSHGLG00100008718	-	94	34.337	Heterocephalus_glaber_male
YOL010W	-	97	33.696	ENSHGLG00100018010	-	97	33.696	Heterocephalus_glaber_male
YOL010W	-	97	38.147	ENSHCOG00000020170	rcl1	98	38.147	Hippocampus_comes
YOL010W	-	97	35.389	ENSIPUG00000018054	RCL1	99	35.389	Ictalurus_punctatus
YOL010W	-	97	36.757	ENSSTOG00000000023	RCL1	98	36.757	Ictidomys_tridecemlineatus
YOL010W	-	97	33.880	ENSJJAG00000015632	-	97	33.880	Jaculus_jaculus
YOL010W	-	97	35.904	ENSJJAG00000022803	-	98	35.946	Jaculus_jaculus
YOL010W	-	97	37.297	ENSKMAG00000011946	rcl1	98	37.297	Kryptolebias_marmoratus
YOL010W	-	97	36.043	ENSLBEG00000003957	rcl1	98	36.043	Labrus_bergylta
YOL010W	-	84	39.172	ENSLACG00000004594	RCL1	95	39.482	Latimeria_chalumnae
YOL010W	-	99	35.561	ENSLOCG00000010148	rcl1	99	35.561	Lepisosteus_oculatus
YOL010W	-	97	37.940	ENSLAFG00000017495	RCL1	97	37.940	Loxodonta_africana
YOL010W	-	97	35.310	ENSMFAG00000037906	RCL1	98	36.486	Macaca_fascicularis
YOL010W	-	97	35.310	ENSMNEG00000012288	RCL1	98	36.486	Macaca_nemestrina
YOL010W	-	97	35.310	ENSMLEG00000043088	RCL1	98	36.486	Mandrillus_leucophaeus
YOL010W	-	97	37.127	ENSMAMG00000008311	rcl1	98	37.127	Mastacembelus_armatus
YOL010W	-	97	37.297	ENSMZEG00005017292	rcl1	98	37.297	Maylandia_zebra
YOL010W	-	57	32.883	ENSMGAG00000002245	RCL1	99	32.883	Meleagris_gallopavo
YOL010W	-	57	31.050	ENSMAUG00000008922	Rcl1	99	31.050	Mesocricetus_auratus
YOL010W	-	97	35.501	ENSMICG00000015562	RCL1	98	36.685	Microcebus_murinus
YOL010W	-	97	35.904	ENSMOCG00000012145	Rcl1	98	35.946	Microtus_ochrogaster
YOL010W	-	97	36.585	ENSMMOG00000021264	rcl1	98	37.838	Mola_mola
YOL010W	-	91	36.416	ENSMODG00000015377	RCL1	90	36.127	Monodelphis_domestica
YOL010W	-	97	37.265	ENSMALG00000018618	rcl1	98	37.265	Monopterus_albus
YOL010W	-	97	36.170	MGP_CAROLIEiJ_G0022853	Rcl1	98	36.216	Mus_caroli
YOL010W	-	97	35.904	ENSMUSG00000024785	Rcl1	98	35.946	Mus_musculus
YOL010W	-	97	35.904	MGP_PahariEiJ_G0014346	Rcl1	98	35.946	Mus_pahari
YOL010W	-	97	35.638	MGP_SPRETEiJ_G0023771	Rcl1	98	35.676	Mus_spretus
YOL010W	-	97	36.436	ENSMPUG00000004998	RCL1	98	36.436	Mustela_putorius_furo
YOL010W	-	97	35.946	ENSMLUG00000009654	RCL1	98	37.127	Myotis_lucifugus
YOL010W	-	97	36.968	ENSNGAG00000015327	Rcl1	98	37.027	Nannospalax_galili
YOL010W	-	89	34.925	ENSNBRG00000019854	rcl1	91	34.925	Neolamprologus_brichardi
YOL010W	-	97	34.959	ENSNLEG00000008891	RCL1	98	36.141	Nomascus_leucogenys
YOL010W	-	97	32.249	ENSMEUG00000007653	RCL1	97	32.249	Notamacropus_eugenii
YOL010W	-	97	36.022	ENSOPRG00000010965	RCL1	98	36.022	Ochotona_princeps
YOL010W	-	87	30.606	ENSODEG00000004151	RCL1	95	30.606	Octodon_degus
YOL010W	-	97	37.940	ENSONIG00000003871	rcl1	98	37.940	Oreochromis_niloticus
YOL010W	-	97	36.436	ENSOCUG00000008161	RCL1	98	36.486	Oryctolagus_cuniculus
YOL010W	-	97	37.027	ENSORLG00000010443	rcl1	98	37.027	Oryzias_latipes
YOL010W	-	97	37.568	ENSORLG00020012211	rcl1	98	37.568	Oryzias_latipes_hni
YOL010W	-	97	37.838	ENSORLG00015001122	rcl1	98	37.838	Oryzias_latipes_hsok
YOL010W	-	97	38.275	ENSOMEG00000022976	rcl1	86	38.275	Oryzias_melastigma
YOL010W	-	97	35.870	ENSOGAG00000007480	RCL1	98	35.870	Otolemur_garnettii
YOL010W	-	97	37.568	ENSOARG00000013463	RCL1	98	37.568	Ovis_aries
YOL010W	-	97	36.216	ENSPPAG00000037958	RCL1	98	36.216	Pan_paniscus
YOL010W	-	97	34.865	ENSPPRG00000022645	RCL1	98	34.865	Panthera_pardus
YOL010W	-	87	33.233	ENSPTIG00000019031	RCL1	99	30.594	Panthera_tigris_altaica
YOL010W	-	97	35.040	ENSPTRG00000020743	RCL1	98	36.216	Pan_troglodytes
YOL010W	-	97	35.310	ENSPANG00000025151	RCL1	98	36.486	Papio_anubis
YOL010W	-	97	37.634	ENSPKIG00000021022	rcl1	98	37.634	Paramormyrops_kingsleyae
YOL010W	-	87	35.905	ENSPSIG00000012302	RCL1	99	35.905	Pelodiscus_sinensis
YOL010W	-	97	37.057	ENSPMGG00000024007	rcl1	98	37.500	Periophthalmus_magnuspinnatus
YOL010W	-	97	35.904	ENSPEMG00000023275	Rcl1	98	35.946	Peromyscus_maniculatus_bairdii
YOL010W	-	97	36.216	ENSPCIG00000000188	RCL1	98	36.216	Phascolarctos_cinereus
YOL010W	-	97	37.875	ENSPFOG00000019682	rcl1	97	37.875	Poecilia_formosa
YOL010W	-	97	37.875	ENSPLAG00000022354	rcl1	98	37.875	Poecilia_latipinna
YOL010W	-	97	37.875	ENSPMEG00000008131	rcl1	98	37.875	Poecilia_mexicana
YOL010W	-	97	36.927	ENSPREG00000008032	rcl1	98	36.927	Poecilia_reticulata
YOL010W	-	97	35.310	ENSPPYG00000019244	RCL1	98	36.486	Pongo_abelii
YOL010W	-	99	36.170	ENSPCAG00000001440	RCL1	99	36.170	Procavia_capensis
YOL010W	-	97	35.772	ENSPCOG00000009611	RCL1	98	36.957	Propithecus_coquereli
YOL010W	-	97	37.297	ENSPVAG00000015752	RCL1	98	37.297	Pteropus_vampyrus
YOL010W	-	97	36.856	ENSPNYG00000012910	rcl1	98	36.856	Pundamilia_nyererei
YOL010W	-	99	37.731	ENSPNAG00000028307	rcl1	91	37.731	Pygocentrus_nattereri
YOL010W	-	97	36.170	ENSRNOG00000015491	Rcl1	98	36.216	Rattus_norvegicus
YOL010W	-	97	36.216	ENSRBIG00000035818	RCL1	98	36.216	Rhinopithecus_bieti
YOL010W	-	97	35.310	ENSRROG00000029781	RCL1	98	36.486	Rhinopithecus_roxellana
YOL010W	-	97	36.486	ENSSBOG00000026369	RCL1	98	36.486	Saimiri_boliviensis_boliviensis
YOL010W	-	88	33.934	ENSSHAG00000014086	RCL1	99	33.934	Sarcophilus_harrisii
YOL010W	-	97	37.500	ENSSFOG00015023020	rcl1	98	37.500	Scleropages_formosus
YOL010W	-	97	37.940	ENSSMAG00000019751	rcl1	84	37.940	Scophthalmus_maximus
YOL010W	-	99	37.701	ENSSDUG00000006349	rcl1	99	37.701	Seriola_dumerili
YOL010W	-	99	37.701	ENSSLDG00000022076	rcl1	99	37.701	Seriola_lalandi_dorsalis
YOL010W	-	97	35.638	ENSSARG00000009260	RCL1	98	35.676	Sorex_araneus
YOL010W	-	97	35.372	ENSSPUG00000016330	RCL1	98	35.372	Sphenodon_punctatus
YOL010W	-	99	38.338	ENSSPAG00000018038	rcl1	99	38.338	Stegastes_partitus
YOL010W	-	97	36.486	ENSSSCG00000005217	RCL1	81	36.486	Sus_scrofa
YOL010W	-	97	36.658	ENSTGUG00000005138	RCL1	98	36.658	Taeniopygia_guttata
YOL010W	-	97	37.398	ENSTRUG00000010493	rcl1	98	37.398	Takifugu_rubripes
YOL010W	-	97	36.885	ENSTNIG00000013214	rcl1	97	36.885	Tetraodon_nigroviridis
YOL010W	-	97	35.135	ENSTBEG00000016339	RCL1	98	35.135	Tupaia_belangeri
YOL010W	-	97	36.856	ENSTTRG00000016525	RCL1	98	36.856	Tursiops_truncatus
YOL010W	-	97	36.170	ENSUAMG00000005598	RCL1	98	36.216	Ursus_americanus
YOL010W	-	87	34.036	ENSUMAG00000017890	RCL1	97	34.036	Ursus_maritimus
YOL010W	-	87	34.337	ENSVPAG00000009188	RCL1	99	34.337	Vicugna_pacos
YOL010W	-	87	34.835	ENSVVUG00000007304	RCL1	88	34.535	Vulpes_vulpes
YOL010W	-	97	35.925	ENSXETG00000000592	rcl1	97	35.925	Xenopus_tropicalis
YOL010W	-	52	31.771	ENSXCOG00000008002	rtca	55	31.771	Xiphophorus_couchianus
YOL010W	-	97	38.315	ENSXCOG00000004922	rcl1	98	38.315	Xiphophorus_couchianus
YOL010W	-	97	38.315	ENSXMAG00000022366	RCL1	98	38.315	Xiphophorus_maculatus