EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YOL102C (Gene tree)
Gene ID: -
Gene Symbol: TPT1
Alias: -
Full Name: tRNA 2'-phosphotransferase that catalyzes final step in tRNA splicing: the transfer of the 2'-PO(4) from the splice junction to NAD(+) to form ADP-ribose 1''-2''cyclic phosphate and nicotinamide
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 693 bases
Position: chrXV:125997-126689
Accession: S000005462
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YOL102C_mRNA	PTS_2-RNA	PF01885.16	1.5e-60	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YOL102C_mRNA	-	693	-	YOL102C_mRNA	230 (aa)	-	Q12272

Gene Model

Click here to download YOL102C's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YOL102C's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YOL102C	TPT1	80	40.323	ENSG00000149743	TRPT1	84	40.606	Homo_sapiens
YOL102C	TPT1	80	36.757	ENSAPOG00000012925	trpt1	78	36.757	Acanthochromis_polyacanthus
YOL102C	TPT1	80	39.674	ENSAMEG00000018040	TRPT1	72	38.830	Ailuropoda_melanoleuca
YOL102C	TPT1	79	36.413	ENSACIG00000022413	trpt1	82	36.458	Amphilophus_citrinellus
YOL102C	TPT1	80	37.838	ENSAOCG00000001163	trpt1	67	37.838	Amphiprion_ocellaris
YOL102C	TPT1	80	38.378	ENSAPEG00000009873	trpt1	78	38.378	Amphiprion_percula
YOL102C	TPT1	81	36.170	ENSATEG00000014371	trpt1	79	36.170	Anabas_testudineus
YOL102C	TPT1	79	38.798	ENSACAG00000000696	TRPT1	78	38.798	Anolis_carolinensis
YOL102C	TPT1	80	38.919	ENSANAG00000019580	TRPT1	71	40.000	Aotus_nancymaae
YOL102C	TPT1	80	36.757	ENSACLG00000016893	trpt1	81	36.082	Astatotilapia_calliptera
YOL102C	TPT1	80	35.676	ENSAMXG00000010533	trpt1	79	35.294	Astyanax_mexicanus
YOL102C	TPT1	81	39.153	ENSBTAG00000016555	TRPT1	75	34.568	Bos_taurus
YOL102C	TPT1	81	39.153	ENSCJAG00000018169	TRPT1	73	39.634	Callithrix_jacchus
YOL102C	TPT1	81	39.362	ENSCAFG00000014591	TRPT1	71	40.000	Canis_familiaris
YOL102C	TPT1	81	39.362	ENSCAFG00020014101	TRPT1	74	39.153	Canis_lupus_dingo
YOL102C	TPT1	80	39.459	ENSCHIG00000021308	TRPT1	71	39.459	Capra_hircus
YOL102C	TPT1	68	35.220	ENSTSYG00000026766	TRPT1	78	36.567	Carlito_syrichta
YOL102C	TPT1	80	39.037	ENSCAPG00000016934	TRPT1	74	39.037	Cavia_aperea
YOL102C	TPT1	80	39.037	ENSCPOG00000002923	TRPT1	71	39.037	Cavia_porcellus
YOL102C	TPT1	68	35.443	ENSCCAG00000025683	TRPT1	78	36.842	Cebus_capucinus
YOL102C	TPT1	81	38.743	ENSCATG00000031563	TRPT1	73	39.157	Cercocebus_atys
YOL102C	TPT1	80	40.541	ENSCLAG00000016380	TRPT1	70	40.541	Chinchilla_lanigera
YOL102C	TPT1	80	38.172	ENSCSAG00000006952	TRPT1	70	38.172	Chlorocebus_sabaeus
YOL102C	TPT1	57	37.879	ENSCING00000002405	-	68	37.879	Ciona_intestinalis
YOL102C	TPT1	81	31.746	ENSCING00000024241	-	74	31.746	Ciona_intestinalis
YOL102C	TPT1	80	36.559	ENSCSAVG00000011071	-	57	36.559	Ciona_savignyi
YOL102C	TPT1	79	37.297	ENSCSAVG00000003949	-	80	37.297	Ciona_savignyi
YOL102C	TPT1	80	39.572	ENSCANG00000042980	TRPT1	71	40.123	Colobus_angolensis_palliatus
YOL102C	TPT1	80	39.459	ENSCGRG00001008474	Trpt1	71	39.459	Cricetulus_griseus_chok1gshd
YOL102C	TPT1	80	39.459	ENSCGRG00000009793	Trpt1	71	39.459	Cricetulus_griseus_crigri
YOL102C	TPT1	80	35.450	ENSCSEG00000005840	trpt1	78	35.450	Cynoglossus_semilaevis
YOL102C	TPT1	82	38.743	ENSCVAG00000006318	trpt1	84	39.037	Cyprinodon_variegatus
YOL102C	TPT1	80	39.247	ENSDARG00000037628	trpt1	82	41.525	Danio_rerio
YOL102C	TPT1	81	32.979	ENSDNOG00000044923	TRPT1	64	32.979	Dasypus_novemcinctus
YOL102C	TPT1	81	38.743	ENSDORG00000001624	Trpt1	73	38.743	Dipodomys_ordii
YOL102C	TPT1	80	34.225	FBgn0053057	CG33057	84	34.225	Drosophila_melanogaster
YOL102C	TPT1	77	41.436	ENSEBUG00000012569	-	80	37.736	Eptatretus_burgeri
YOL102C	TPT1	80	38.378	ENSEASG00005019983	TRPT1	70	38.378	Equus_asinus_asinus
YOL102C	TPT1	80	38.378	ENSECAG00000009917	TRPT1	78	37.705	Equus_caballus
YOL102C	TPT1	80	40.541	ENSEEUG00000012739	TRPT1	70	40.541	Erinaceus_europaeus
YOL102C	TPT1	80	36.216	ENSELUG00000007385	trpt1	78	36.216	Esox_lucius
YOL102C	TPT1	80	38.378	ENSFCAG00000024621	TRPT1	71	39.375	Felis_catus
YOL102C	TPT1	82	41.361	ENSFDAG00000002738	TRPT1	72	41.361	Fukomys_damarensis
YOL102C	TPT1	81	36.508	ENSFHEG00000002434	trpt1	80	36.508	Fundulus_heteroclitus
YOL102C	TPT1	79	35.519	ENSGMOG00000008716	trpt1	85	35.519	Gadus_morhua
YOL102C	TPT1	79	34.807	ENSGALG00000050256	TRPT1	59	34.807	Gallus_gallus
YOL102C	TPT1	81	36.702	ENSGAFG00000016762	trpt1	81	36.702	Gambusia_affinis
YOL102C	TPT1	83	35.938	ENSGACG00000016927	trpt1	84	33.962	Gasterosteus_aculeatus
YOL102C	TPT1	80	39.572	ENSGGOG00000012163	TRPT1	71	40.741	Gorilla_gorilla
YOL102C	TPT1	80	37.297	ENSHBUG00000012772	trpt1	81	36.598	Haplochromis_burtoni
YOL102C	TPT1	81	38.624	ENSHGLG00000013748	TRPT1	71	38.624	Heterocephalus_glaber_female
YOL102C	TPT1	81	38.624	ENSHGLG00100013048	TRPT1	71	38.624	Heterocephalus_glaber_male
YOL102C	TPT1	81	37.234	ENSHCOG00000000218	trpt1	78	37.234	Hippocampus_comes
YOL102C	TPT1	80	33.690	ENSIPUG00000002573	trpt1	79	33.690	Ictalurus_punctatus
YOL102C	TPT1	79	39.130	ENSSTOG00000014285	TRPT1	70	39.130	Ictidomys_tridecemlineatus
YOL102C	TPT1	80	40.000	ENSJJAG00000010855	Trpt1	72	40.000	Jaculus_jaculus
YOL102C	TPT1	85	34.975	ENSKMAG00000004214	trpt1	89	34.123	Kryptolebias_marmoratus
YOL102C	TPT1	80	35.829	ENSLBEG00000005640	trpt1	79	35.829	Labrus_bergylta
YOL102C	TPT1	79	40.437	ENSLACG00000016922	TRPT1	73	40.437	Latimeria_chalumnae
YOL102C	TPT1	95	36.818	ENSLOCG00000001345	trpt1	83	36.818	Lepisosteus_oculatus
YOL102C	TPT1	82	37.895	ENSLAFG00000009075	TRPT1	72	37.895	Loxodonta_africana
YOL102C	TPT1	81	38.743	ENSMFAG00000036828	TRPT1	73	39.157	Macaca_fascicularis
YOL102C	TPT1	81	38.220	ENSMMUG00000012940	TRPT1	73	39.157	Macaca_mulatta
YOL102C	TPT1	81	38.743	ENSMNEG00000033348	TRPT1	73	39.157	Macaca_nemestrina
YOL102C	TPT1	81	38.743	ENSMLEG00000031438	TRPT1	71	40.123	Mandrillus_leucophaeus
YOL102C	TPT1	80	36.216	ENSMAMG00000021617	trpt1	78	36.216	Mastacembelus_armatus
YOL102C	TPT1	80	37.297	ENSMZEG00005004773	trpt1	81	36.598	Maylandia_zebra
YOL102C	TPT1	61	35.461	ENSMAUG00000014107	Trpt1	66	35.461	Mesocricetus_auratus
YOL102C	TPT1	80	36.757	ENSMICG00000016950	TRPT1	71	38.125	Microcebus_murinus
YOL102C	TPT1	80	39.459	ENSMOCG00000021342	Trpt1	71	39.459	Microtus_ochrogaster
YOL102C	TPT1	80	36.364	ENSMMOG00000002896	trpt1	77	36.364	Mola_mola
YOL102C	TPT1	80	40.860	ENSMODG00000010226	TRPT1	81	40.860	Monodelphis_domestica
YOL102C	TPT1	80	33.871	ENSMALG00000012208	trpt1	73	33.871	Monopterus_albus
YOL102C	TPT1	80	38.298	MGP_CAROLIEiJ_G0022627	Trpt1	71	38.298	Mus_caroli
YOL102C	TPT1	80	38.298	ENSMUSG00000047656	Trpt1	71	38.298	Mus_musculus
YOL102C	TPT1	81	35.979	MGP_PahariEiJ_G0014121	Trpt1	73	35.979	Mus_pahari
YOL102C	TPT1	80	38.298	MGP_SPRETEiJ_G0023537	Trpt1	71	38.298	Mus_spretus
YOL102C	TPT1	80	39.130	ENSMPUG00000013272	TRPT1	65	39.130	Mustela_putorius_furo
YOL102C	TPT1	80	38.919	ENSMLUG00000024858	TRPT1	70	38.919	Myotis_lucifugus
YOL102C	TPT1	70	33.333	ENSNGAG00000007665	Trpt1	75	33.333	Nannospalax_galili
YOL102C	TPT1	80	33.831	ENSNBRG00000001528	trpt1	80	34.158	Neolamprologus_brichardi
YOL102C	TPT1	79	33.158	ENSNLEG00000033525	-	69	33.158	Nomascus_leucogenys
YOL102C	TPT1	79	42.162	ENSMEUG00000000943	TRPT1	70	42.162	Notamacropus_eugenii
YOL102C	TPT1	80	39.247	ENSOPRG00000015917	TRPT1	71	39.247	Ochotona_princeps
YOL102C	TPT1	80	40.000	ENSODEG00000015724	TRPT1	71	40.000	Octodon_degus
YOL102C	TPT1	80	36.898	ENSONIG00000005333	trpt1	81	36.598	Oreochromis_niloticus
YOL102C	TPT1	85	31.280	ENSOANG00000010375	TRPT1	90	30.734	Ornithorhynchus_anatinus
YOL102C	TPT1	80	39.459	ENSOCUG00000022244	TRPT1	71	39.459	Oryctolagus_cuniculus
YOL102C	TPT1	83	39.378	ENSORLG00000025159	trpt1	84	39.378	Oryzias_latipes
YOL102C	TPT1	81	39.153	ENSORLG00020018944	trpt1	81	39.153	Oryzias_latipes_hni
YOL102C	TPT1	74	36.047	ENSORLG00015017108	trpt1	73	36.047	Oryzias_latipes_hsok
YOL102C	TPT1	81	40.426	ENSOMEG00000018645	trpt1	81	40.426	Oryzias_melastigma
YOL102C	TPT1	83	38.660	ENSOGAG00000007134	TRPT1	74	38.660	Otolemur_garnettii
YOL102C	TPT1	80	39.459	ENSOARG00000004961	TRPT1	70	39.459	Ovis_aries
YOL102C	TPT1	69	41.615	ENSPPAG00000027600	TRPT1	71	41.615	Pan_paniscus
YOL102C	TPT1	74	38.372	ENSPPRG00000022870	TRPT1	77	38.372	Panthera_pardus
YOL102C	TPT1	68	34.810	ENSPTIG00000018872	TRPT1	76	35.338	Panthera_tigris_altaica
YOL102C	TPT1	69	41.615	ENSPTRG00000003822	TRPT1	71	41.615	Pan_troglodytes
YOL102C	TPT1	81	39.267	ENSPANG00000011001	TRPT1	73	39.759	Papio_anubis
YOL102C	TPT1	80	35.870	ENSPKIG00000008323	trpt1	77	35.870	Paramormyrops_kingsleyae
YOL102C	TPT1	86	36.946	ENSPSIG00000009910	TRPT1	83	36.946	Pelodiscus_sinensis
YOL102C	TPT1	82	36.649	ENSPMGG00000005037	trpt1	82	36.649	Periophthalmus_magnuspinnatus
YOL102C	TPT1	80	39.785	ENSPEMG00000013720	Trpt1	71	39.785	Peromyscus_maniculatus_bairdii
YOL102C	TPT1	83	38.308	ENSPMAG00000001449	trpt1	92	38.308	Petromyzon_marinus
YOL102C	TPT1	80	38.378	ENSPCIG00000008060	TRPT1	77	34.532	Phascolarctos_cinereus
YOL102C	TPT1	81	35.638	ENSPFOG00000009475	trpt1	80	35.638	Poecilia_formosa
YOL102C	TPT1	81	35.638	ENSPMEG00000003682	trpt1	80	35.638	Poecilia_mexicana
YOL102C	TPT1	81	35.638	ENSPREG00000015408	trpt1	80	35.638	Poecilia_reticulata
YOL102C	TPT1	80	39.572	ENSPPYG00000003116	TRPT1	70	39.572	Pongo_abelii
YOL102C	TPT1	81	39.474	ENSPCAG00000000762	TRPT1	72	39.474	Procavia_capensis
YOL102C	TPT1	81	37.368	ENSPCOG00000010370	TRPT1	71	39.130	Propithecus_coquereli
YOL102C	TPT1	80	34.171	ENSPNYG00000014805	trpt1	80	33.831	Pundamilia_nyererei
YOL102C	TPT1	80	36.413	ENSPNAG00000008548	trpt1	79	36.022	Pygocentrus_nattereri
YOL102C	TPT1	81	35.638	ENSRNOG00000023023	Trpt1	73	35.638	Rattus_norvegicus
YOL102C	TPT1	81	36.649	ENSRBIG00000040432	TRPT1	71	38.272	Rhinopithecus_bieti
YOL102C	TPT1	81	37.696	ENSRROG00000044905	TRPT1	71	39.506	Rhinopithecus_roxellana
YOL102C	TPT1	80	38.378	ENSSBOG00000021466	TRPT1	71	39.375	Saimiri_boliviensis_boliviensis
YOL102C	TPT1	78	37.158	ENSSFOG00015005844	trpt1	78	37.158	Scleropages_formosus
YOL102C	TPT1	80	37.968	ENSSMAG00000017744	trpt1	79	37.968	Scophthalmus_maximus
YOL102C	TPT1	80	35.829	ENSSDUG00000017106	trpt1	80	35.829	Seriola_dumerili
YOL102C	TPT1	79	35.870	ENSSLDG00000015957	trpt1	77	35.870	Seriola_lalandi_dorsalis
YOL102C	TPT1	76	35.028	ENSSPAG00000007557	trpt1	67	35.028	Stegastes_partitus
YOL102C	TPT1	81	38.298	ENSSSCG00000013040	TRPT1	69	38.298	Sus_scrofa
YOL102C	TPT1	80	37.895	ENSTRUG00000023723	trpt1	78	37.895	Takifugu_rubripes
YOL102C	TPT1	79	39.572	ENSTNIG00000003381	trpt1	77	39.572	Tetraodon_nigroviridis
YOL102C	TPT1	81	38.743	ENSTBEG00000006023	TRPT1	71	38.743	Tupaia_belangeri
YOL102C	TPT1	83	40.933	ENSTTRG00000010252	TRPT1	73	40.933	Tursiops_truncatus
YOL102C	TPT1	80	39.674	ENSUAMG00000015208	TRPT1	70	39.674	Ursus_americanus
YOL102C	TPT1	81	38.830	ENSUMAG00000001410	TRPT1	70	39.674	Ursus_maritimus
YOL102C	TPT1	81	39.153	ENSVVUG00000029774	TRPT1	74	39.153	Vulpes_vulpes
YOL102C	TPT1	80	39.474	ENSXETG00000007196	trpt1	78	39.474	Xenopus_tropicalis
YOL102C	TPT1	80	36.898	ENSXCOG00000001614	trpt1	82	36.508	Xiphophorus_couchianus
YOL102C	TPT1	80	36.898	ENSXMAG00000003142	trpt1	81	36.898	Xiphophorus_maculatus