EuRBPDB

Description

Ensembl ID: YOL120C (Gene tree)
Gene ID: -
Gene Symbol: RPL18A
Alias: RP28A|RP28B
Full Name: Ribosomal 60S subunit protein L18A%3B intron of RPL18A pre-mRNA forms stem-loop structures that are a target for Rnt1p cleavage leading to degradation%3B homologous to mammalian ribosomal protein L18%2C no bacterial homolog%3B RPL18A has a paralog%2C RPL18B%2C that arose from the whole genome duplication
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 1008
Position: chrXV: 93395-94402
Accession: S000005480
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
25173706	Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins	RNPxl & yeast	2014 Aug 31	Kramer K	DOI: 10.1038/nmeth.3092
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YOL120C_mRNA	-	561	-	YOL120C_mRNA	186 (aa)	-	P0CX49

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YOL120C	RPL18A	93	56.818	WBGene00004430	rpl-18	99	57.447	Caenorhabditis_elegans
YOL120C	RPL18A	96	54.396	ENSDARG00000029533	rpl18	99	54.396	Danio_rerio
YOL120C	RPL18A	99	56.915	FBgn0035753	RpL18	99	57.447	Drosophila_melanogaster
YOL120C	RPL18A	93	53.977	ENSG00000063177	RPL18	99	57.325	Homo_sapiens
YOL120C	RPL18A	93	55.114	ENSMUSG00000059070	Rpl18	99	58.599	Mus_musculus
YOL120C	RPL18A	100	100.000	YNL301C	RPL18B	100	100.000	Saccharomyces_cerevisiae