EuRBPDB

Description

Ensembl ID: YOL121C (Gene tree)
Gene ID: -
Gene Symbol: RPS19A
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 825
Position: chrXV:92026-92850
Accession: S000005481
RBP type: canonical RBP
Summary: Protein component of the small (40S) ribosomal subunit%3B required for assembly and maturation of pre-40 S particles%3B homologous to mammalian ribosomal protein S19%2C no bacterial homolog%3B mutations in human RPS19 are associated with Diamond Blackfan anemia%3B RPS19A has a paralog%2C RPS19B%2C that arose from the whole genome duplication

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YOL121C_mRNA	Ribosomal_S19e	PF01090.19	3.5e-54	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YOL121C_mRNA	-	435	-	YOL121C_mRNA	144 (aa)	-	P07280

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YOL121C	RPS19A	100	99.306	YNL302C	RPS19B	100	99.306

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YOL121C	RPS19A	94	44.853	WBGene00004488	rps-19	92	44.853	Caenorhabditis_elegans
YOL121C	RPS19A	96	52.518	ENSSLDG00000001853	-	88	52.518	Seriola_lalandi_dorsalis