EuRBPDB

Description

Ensembl ID: YOL123W (Gene tree)
Gene ID: -
Gene Symbol: HRP1
Alias: NAB4|NAB5
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 1605
Position: chrXV:87844-89448
Accession: S000005483
RBP type: canonical RBP
Summary: Subunit of cleavage factor I%3B cleavage factor I is a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends%3B RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences%3B required for genome stability

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YOL123W_mRNA	RRM_1	PF00076.22	2.4e-34	1	2
YOL123W_mRNA	RRM_1	PF00076.22	2.4e-34	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
25173706	Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins	RNPxl.PAR_CL & yeast	2014 Aug 31	Kramer K	DOI: 10.1038/nmeth.3092
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128
23222640	Global analysis of yeast mRNPs	IC & yeast	2012 Dec 9	Mitchell SF	DOI: 10.1038/nsmb.2468
21124907	A screen for RNA binding proteins in yeast indicates dual functions for many enzymes	ProtoArray & yeast	2010 Nov 11	DOI: 10.1371/journal.pone.0015499
20844764	Proteome-wide search reveals unexpected RNA binding proteins in Saccharomyces cerevisiae	MS & yeast	2010 Sep 10	Tsvetanova NG	DOI: 10.1371/journal.pone.0012671

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YOL123W_mRNA	-	1605	-	YOL123W_mRNA	534 (aa)	-	Q99383

Gene Model

Protein-Protein Interaction (PPI)