EuRBPDB

Description

Ensembl ID: YOL125W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: 2'-O-methyltransferase%3B responsible for modification of tRNA at position 4%3B C-terminal domain has similarity to Rossmann-fold (RFM) superfamily of RNA methyltransferases
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 1431 bases
Position: chrXV:83834-85264
Accession: S000005485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YOL125W_mRNA	TRM13	PF05206.14	3.3e-75	1	1
YOL125W_mRNA	zf-U11-48K	PF05253.12	1.2e-12	1	1
YOL125W_mRNA	zf-TRM13_CCCH	PF11722.8	8.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YOL125W_mRNA	-	1431	-	YOL125W_mRNA	476 (aa)	-	Q12383

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YOL125W	-	64	31.193	ENSCAFG00020011572	TRMT13	93	31.193	Canis_lupus_dingo
YOL125W	-	62	31.949	ENSDNOG00000001710	TRMT13	80	31.949	Dasypus_novemcinctus
YOL125W	-	98	32.449	FBgn0037435	CG18048	95	32.653	Drosophila_melanogaster
YOL125W	-	62	30.745	ENSGAGG00000023303	TRMT13	93	30.745	Gopherus_agassizii
YOL125W	-	95	31.128	ENSLACG00000013153	TRMT13	95	31.128	Latimeria_chalumnae
YOL125W	-	86	30.655	ENSMGAG00000006970	TRMT13	98	30.655	Meleagris_gallopavo
YOL125W	-	64	30.124	MGP_PahariEiJ_G0027014	Trmt13	91	30.124	Mus_pahari
YOL125W	-	62	32.063	ENSOPRG00000012048	TRMT13	53	32.063	Ochotona_princeps
YOL125W	-	78	32.973	ENSSARG00000010344	TRMT13	83	32.973	Sorex_araneus
YOL125W	-	63	70.000	ENSVPAG00000001034	TRMT13	72	70.000	Vicugna_pacos
YOL125W	-	50	30.739	ENSVVUG00000021996	TRMT13	70	30.739	Vulpes_vulpes
YOL125W	-	95	30.346	ENSXETG00000013204	trmt13	95	30.346	Xenopus_tropicalis