EuRBPDB

Description

Ensembl ID: YOL127W (Gene tree)
Gene ID: -
Gene Symbol: RPL25
Alias: -
Full Name: Ribosomal 60S subunit protein L25%3B primary rRNA-binding ribosomal protein component of large ribosomal subunit%3B binds to 25S rRNA via a conserved C-terminal motif%3B homologous to mammalian ribosomal protein L23A and bacterial L23
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 843 bases
Position: chrXV:80348-81190
Accession: S000005487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YOL127W_mRNA	Ribosomal_L23	PF00276.20	1.7e-16	1	1
YOL127W_mRNA	Ribosomal_L23eN	PF03939.13	7.8e-20	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YOL127W_mRNA	-	429	-	YOL127W_mRNA	142 (aa)	-	P04456

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YOL127W	RPL25	96	61.314	ENSCING00000010522	-	87	60.317	Ciona_intestinalis
YOL127W	RPL25	89	57.937	ENSCSAVG00000007968	-	87	57.937	Ciona_savignyi