EuRBPDB

Description

Ensembl ID: YOL139C (Gene tree)
Gene ID: -
Gene Symbol: CDC33
Alias: TIF45
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 642
Position: chrXV:60383-61024
Accession: S000005499
RBP type: canonical RBP
Summary: mRNA cap binding protein and translation initiation factor eIF4E%3B the eIF4E-cap complex is responsible for mediating cap-dependent mRNA translation via interactions with translation initiation factor eIF4G (Tif4631p or Tif4632p)%3B protein abundance increases in response to DNA replication stress%3B mutants are defective for adhesion and pseudohyphal growth%3B human homolog EIF4E can complement yeast cdc33 null mutant

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YOL139C_mRNA	IF4E	PF01652.18	3.1e-54	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YOL139C_mRNA	-	642	-	YOL139C_mRNA	213 (aa)	-	P07260

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YOL139C	CDC33	86	36.022	FBgn0035823	eIF4E5	79	35.638	Drosophila_melanogaster
YOL139C	CDC33	63	41.912	FBgn0039622	eIF4E6	77	41.912	Drosophila_melanogaster
YOL139C	CDC33	72	40.385	FBgn0265089	eIF4E3	63	40.385	Drosophila_melanogaster
YOL139C	CDC33	77	43.373	FBgn0015218	eIF4E1	66	43.373	Drosophila_melanogaster
YOL139C	CDC33	72	39.744	FBgn0035709	eIF4E4	67	39.744	Drosophila_melanogaster