EuRBPDB

Description

RBDs

Transcripts

Gene Model

Paralogs

Orthologs

Description

Ensembl ID: YOR116C (Gene tree)
Gene ID: -
Gene Symbol: RPO31
Alias: RPC1|RPC160
Full Name: RNA polymerase III largest subunit C160%3B part of core enzyme%3B similar to bacterial beta-prime subunit and to RPA190 and RPO21
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 4383 bases
Position: chrXV:539763-544145
Accession: S000005642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YOR116C_mRNA	RNA_pol_Rpb1_5	PF04998.17	4.8e-83	1	1
YOR116C_mRNA	RNA_pol_Rpb1_4	PF05000.17	7.9e-31	1	1
YOR116C_mRNA	RNA_pol_Rpb1_2	PF00623.20	1.4e-76	1	1
YOR116C_mRNA	RNA_pol_Rpb1_3	PF04983.18	3.6e-39	1	1
YOR116C_mRNA	RNA_pol_Rpb1_1	PF04997.12	5.3e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
					(aa)

Gene Model

Click here to download YOR116C's gene model file

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YOR116C	RPO31	74	32.099	YOR341W	RPA190	65	32.099
YOR116C	RPO31	98	33.794	YDL140C	RPO21	83	33.485

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YOR116C	RPO31	98	50.943	ENSG00000148606	POLR3A	96	62.821	Homo_sapiens
YOR116C	RPO31	57	50.835	ENSAPOG00000022727	polr3a	94	50.835	Acanthochromis_polyacanthus
YOR116C	RPO31	99	50.345	ENSAMEG00000017801	POLR3A	98	50.345	Ailuropoda_melanoleuca
YOR116C	RPO31	93	49.158	ENSACIG00000024504	polr3a	96	49.158	Amphilophus_citrinellus
YOR116C	RPO31	98	50.279	ENSAOCG00000002071	polr3a	97	50.279	Amphiprion_ocellaris
YOR116C	RPO31	98	48.609	ENSAOCG00000003949	-	97	48.609	Amphiprion_ocellaris
YOR116C	RPO31	98	50.175	ENSAPEG00000001966	-	97	50.175	Amphiprion_percula
YOR116C	RPO31	98	50.279	ENSAPEG00000013351	polr3a	98	50.600	Amphiprion_percula
YOR116C	RPO31	98	49.965	ENSATEG00000023277	polr3a	97	49.965	Anabas_testudineus
YOR116C	RPO31	98	50.488	ENSAPLG00000015878	POLR3A	98	50.488	Anas_platyrhynchos
YOR116C	RPO31	93	49.158	ENSACAG00000007985	POLR3A	99	49.158	Anolis_carolinensis
YOR116C	RPO31	98	49.234	ENSANAG00000028922	POLR3A	95	62.821	Aotus_nancymaae
YOR116C	RPO31	98	50.035	ENSACLG00000005914	polr3a	99	50.393	Astatotilapia_calliptera
YOR116C	RPO31	99	47.871	ENSAMXG00000018852	polr3a	99	47.871	Astyanax_mexicanus
YOR116C	RPO31	99	50.381	ENSBTAG00000013259	POLR3A	98	50.520	Bos_taurus
YOR116C	RPO31	97	46.908	WBGene00004411	rpc-1	98	46.838	Caenorhabditis_elegans
YOR116C	RPO31	98	50.871	ENSCJAG00000001015	POLR3A	95	62.821	Callithrix_jacchus
YOR116C	RPO31	99	50.450	ENSCAFG00000015546	POLR3A	98	50.450	Canis_familiaris
YOR116C	RPO31	99	50.450	ENSCAFG00020014711	POLR3A	98	50.450	Canis_lupus_dingo
YOR116C	RPO31	98	50.874	ENSCHIG00000000352	POLR3A	97	50.874	Capra_hircus
YOR116C	RPO31	98	50.874	ENSTSYG00000006671	POLR3A	97	50.874	Carlito_syrichta
YOR116C	RPO31	97	50.843	ENSCAPG00000016031	POLR3A	98	50.843	Cavia_aperea
YOR116C	RPO31	98	50.592	ENSCPOG00000022387	POLR3A	98	50.592	Cavia_porcellus
YOR116C	RPO31	98	50.662	ENSCCAG00000032995	POLR3A	95	62.821	Cebus_capucinus
YOR116C	RPO31	98	50.804	ENSCATG00000035842	POLR3A	96	62.821	Cercocebus_atys
YOR116C	RPO31	99	50.381	ENSCLAG00000009629	POLR3A	98	50.381	Chinchilla_lanigera
YOR116C	RPO31	98	51.083	ENSCSAG00000009292	POLR3A	97	51.083	Chlorocebus_sabaeus
YOR116C	RPO31	81	45.207	ENSCHOG00000008368	POLR3A	94	45.308	Choloepus_hoffmanni
YOR116C	RPO31	99	49.965	ENSCPBG00000002079	POLR3A	98	49.965	Chrysemys_picta_bellii
YOR116C	RPO31	98	47.911	ENSCSAVG00000009925	-	98	47.911	Ciona_savignyi
YOR116C	RPO31	84	49.564	ENSCANG00000041071	POLR3A	96	63.462	Colobus_angolensis_palliatus
YOR116C	RPO31	76	53.092	ENSCGRG00001015599	-	92	53.092	Cricetulus_griseus_chok1gshd
YOR116C	RPO31	81	58.772	ENSCGRG00000001019	Polr3a	97	58.772	Cricetulus_griseus_crigri
YOR116C	RPO31	98	50.173	ENSCSEG00000016653	polr3a	98	50.173	Cynoglossus_semilaevis
YOR116C	RPO31	98	50.693	ENSCVAG00000023049	polr3a	98	50.693	Cyprinodon_variegatus
YOR116C	RPO31	99	50.414	ENSDARG00000102569	polr3a	99	50.414	Danio_rerio
YOR116C	RPO31	98	50.314	ENSDNOG00000010194	POLR3A	98	50.314	Dasypus_novemcinctus
YOR116C	RPO31	98	50.523	ENSDORG00000000184	Polr3a	98	50.523	Dipodomys_ordii
YOR116C	RPO31	97	45.859	FBgn0030687	CG17209	97	45.790	Drosophila_melanogaster
YOR116C	RPO31	73	73.418	ENSETEG00000007477	POLR3A	76	73.418	Echinops_telfairi
YOR116C	RPO31	57	49.943	ENSEBUG00000013761	polr3a	98	49.943	Eptatretus_burgeri
YOR116C	RPO31	99	50.484	ENSEASG00005023053	POLR3A	98	50.484	Equus_asinus_asinus
YOR116C	RPO31	96	50.497	ENSECAG00000019416	POLR3A	99	51.412	Equus_caballus
YOR116C	RPO31	96	48.011	ENSEEUG00000001774	POLR3A	99	48.011	Erinaceus_europaeus
YOR116C	RPO31	99	49.242	ENSELUG00000014016	polr3a	98	49.242	Esox_lucius
YOR116C	RPO31	99	50.519	ENSFCAG00000000843	POLR3A	98	50.519	Felis_catus
YOR116C	RPO31	99	50.035	ENSFALG00000006913	POLR3A	98	50.035	Ficedula_albicollis
YOR116C	RPO31	98	50.523	ENSFDAG00000007813	POLR3A	98	50.453	Fukomys_damarensis
YOR116C	RPO31	98	47.866	ENSFHEG00000011922	polr3a	97	47.866	Fundulus_heteroclitus
YOR116C	RPO31	98	49.757	ENSGMOG00000000291	polr3a	97	49.757	Gadus_morhua
YOR116C	RPO31	99	50.519	ENSGALG00000004947	POLR3A	98	50.519	Gallus_gallus
YOR116C	RPO31	98	50.245	ENSGAFG00000005112	polr3a	97	50.245	Gambusia_affinis
YOR116C	RPO31	99	49.287	ENSGACG00000002304	polr3a	98	49.287	Gasterosteus_aculeatus
YOR116C	RPO31	95	50.716	ENSGAGG00000010386	POLR3A	98	50.716	Gopherus_agassizii
YOR116C	RPO31	97	50.634	ENSGGOG00000027729	POLR3A	96	62.821	Gorilla_gorilla
YOR116C	RPO31	98	50.105	ENSHBUG00000018098	polr3a	97	50.105	Haplochromis_burtoni
YOR116C	RPO31	98	50.871	ENSHGLG00000017899	POLR3A	98	50.871	Heterocephalus_glaber_female
YOR116C	RPO31	98	50.871	ENSHGLG00100008483	POLR3A	98	50.871	Heterocephalus_glaber_male
YOR116C	RPO31	98	50.070	ENSHCOG00000001075	polr3a	98	50.070	Hippocampus_comes
YOR116C	RPO31	98	50.664	ENSSTOG00000012983	POLR3A	97	50.454	Ictidomys_tridecemlineatus
YOR116C	RPO31	98	50.105	ENSKMAG00000015290	polr3a	98	50.105	Kryptolebias_marmoratus
YOR116C	RPO31	99	49.621	ENSLBEG00000017214	polr3a	99	49.621	Labrus_bergylta
YOR116C	RPO31	96	49.087	ENSLACG00000018557	POLR3A	99	49.471	Latimeria_chalumnae
YOR116C	RPO31	99	50.552	ENSLOCG00000004942	polr3a	98	50.552	Lepisosteus_oculatus
YOR116C	RPO31	98	50.349	ENSLAFG00000016719	POLR3A	97	50.349	Loxodonta_africana
YOR116C	RPO31	98	50.874	ENSMFAG00000032218	POLR3A	95	62.821	Macaca_fascicularis
YOR116C	RPO31	98	50.874	ENSMMUG00000005514	POLR3A	96	62.821	Macaca_mulatta
YOR116C	RPO31	97	47.162	ENSMNEG00000035163	POLR3A	99	50.888	Macaca_nemestrina
YOR116C	RPO31	98	48.151	ENSMLEG00000030014	POLR3A	96	62.821	Mandrillus_leucophaeus
YOR116C	RPO31	99	49.725	ENSMAMG00000017497	polr3a	99	49.725	Mastacembelus_armatus
YOR116C	RPO31	98	50.314	ENSMZEG00005000576	polr3a	98	50.314	Maylandia_zebra
YOR116C	RPO31	99	41.144	ENSMGAG00000005713	-	98	40.949	Meleagris_gallopavo
YOR116C	RPO31	99	49.380	ENSMAUG00000016247	Polr3a	98	49.380	Mesocricetus_auratus
YOR116C	RPO31	99	50.796	ENSMICG00000005937	POLR3A	90	62.821	Microcebus_murinus
YOR116C	RPO31	99	50.138	ENSMOCG00000012185	Polr3a	99	50.138	Microtus_ochrogaster
YOR116C	RPO31	99	49.550	ENSMMOG00000013822	polr3a	98	49.550	Mola_mola
YOR116C	RPO31	98	50.454	ENSMODG00000001036	POLR3A	97	50.454	Monodelphis_domestica
YOR116C	RPO31	99	49.759	ENSMALG00000001249	polr3a	99	49.759	Monopterus_albus
YOR116C	RPO31	99	50.276	MGP_CAROLIEiJ_G0019016	Polr3a	99	50.276	Mus_caroli
YOR116C	RPO31	99	50.345	ENSMUSG00000025280	Polr3a	99	50.345	Mus_musculus
YOR116C	RPO31	99	50.207	MGP_PahariEiJ_G0030029	Polr3a	99	50.207	Mus_pahari
YOR116C	RPO31	99	48.929	MGP_SPRETEiJ_G0019894	Polr3a	92	62.727	Mus_spretus
YOR116C	RPO31	99	50.553	ENSMPUG00000003790	POLR3A	98	50.553	Mustela_putorius_furo
YOR116C	RPO31	99	49.965	ENSMLUG00000011522	POLR3A	98	49.965	Myotis_lucifugus
YOR116C	RPO31	98	49.378	ENSNGAG00000015863	Polr3a	98	49.412	Nannospalax_galili
YOR116C	RPO31	90	54.907	ENSNBRG00000014262	polr3a	94	54.907	Neolamprologus_brichardi
YOR116C	RPO31	85	49.854	ENSNLEG00000010501	POLR3A	88	49.854	Nomascus_leucogenys
YOR116C	RPO31	85	53.846	ENSMEUG00000012446	POLR3A	88	53.846	Notamacropus_eugenii
YOR116C	RPO31	94	50.542	ENSOPRG00000001880	-	94	50.542	Ochotona_princeps
YOR116C	RPO31	99	50.311	ENSODEG00000015146	POLR3A	98	50.242	Octodon_degus
YOR116C	RPO31	98	49.965	ENSONIG00000016129	polr3a	97	49.965	Oreochromis_niloticus
YOR116C	RPO31	97	50.918	ENSOANG00000007013	POLR3A	98	50.918	Ornithorhynchus_anatinus
YOR116C	RPO31	98	50.871	ENSOCUG00000012450	POLR3A	98	50.871	Oryctolagus_cuniculus
YOR116C	RPO31	98	49.620	ENSORLG00000008958	polr3a	98	49.620	Oryzias_latipes
YOR116C	RPO31	98	48.164	ENSORLG00020007525	polr3a	98	49.576	Oryzias_latipes_hni
YOR116C	RPO31	98	49.620	ENSORLG00015006633	polr3a	98	49.620	Oryzias_latipes_hsok
YOR116C	RPO31	98	49.272	ENSOMEG00000012865	polr3a	98	49.272	Oryzias_melastigma
YOR116C	RPO31	98	50.523	ENSOGAG00000010995	POLR3A	98	50.523	Otolemur_garnettii
YOR116C	RPO31	98	50.523	ENSOARG00000009656	POLR3A	97	50.523	Ovis_aries
YOR116C	RPO31	99	50.519	ENSPPRG00000002128	POLR3A	98	50.519	Panthera_pardus
YOR116C	RPO31	99	50.519	ENSPTIG00000020916	POLR3A	98	50.519	Panthera_tigris_altaica
YOR116C	RPO31	98	50.943	ENSPTRG00000002664	POLR3A	96	62.821	Pan_troglodytes
YOR116C	RPO31	98	50.804	ENSPANG00000022508	POLR3A	96	62.821	Papio_anubis
YOR116C	RPO31	98	50.593	ENSPKIG00000008140	polr3a	98	50.593	Paramormyrops_kingsleyae
YOR116C	RPO31	97	50.565	ENSPSIG00000002092	POLR3A	98	50.565	Pelodiscus_sinensis
YOR116C	RPO31	99	50.207	ENSPEMG00000006768	Polr3a	98	50.242	Peromyscus_maniculatus_bairdii
YOR116C	RPO31	98	50.454	ENSPCIG00000015842	POLR3A	97	50.454	Phascolarctos_cinereus
YOR116C	RPO31	54	50.318	ENSPFOG00000006458	polr3a	98	50.318	Poecilia_formosa
YOR116C	RPO31	98	50.419	ENSPLAG00000000997	polr3a	98	50.173	Poecilia_latipinna
YOR116C	RPO31	98	50.419	ENSPMEG00000006821	polr3a	98	50.173	Poecilia_mexicana
YOR116C	RPO31	98	50.489	ENSPREG00000002385	polr3a	98	50.173	Poecilia_reticulata
YOR116C	RPO31	91	51.791	ENSPPYG00000002305	POLR3A	98	51.791	Pongo_abelii
YOR116C	RPO31	80	54.390	ENSPCAG00000005690	POLR3A	82	54.390	Procavia_capensis
YOR116C	RPO31	99	50.796	ENSPCOG00000028311	POLR3A	98	50.796	Propithecus_coquereli
YOR116C	RPO31	99	49.965	ENSPVAG00000015553	POLR3A	98	49.965	Pteropus_vampyrus
YOR116C	RPO31	98	50.244	ENSPNYG00000020987	polr3a	98	50.244	Pundamilia_nyererei
YOR116C	RPO31	99	47.763	ENSPNAG00000006629	polr3a	99	47.763	Pygocentrus_nattereri
YOR116C	RPO31	99	50.345	ENSRNOG00000010008	Polr3a	99	50.345	Rattus_norvegicus
YOR116C	RPO31	98	48.707	ENSRBIG00000034967	POLR3A	96	62.821	Rhinopithecus_bieti
YOR116C	RPO31	98	51.153	ENSRROG00000025527	POLR3A	96	62.821	Rhinopithecus_roxellana
YOR116C	RPO31	98	50.871	ENSSBOG00000022199	POLR3A	93	62.821	Saimiri_boliviensis_boliviensis
YOR116C	RPO31	98	50.594	ENSSHAG00000007588	POLR3A	92	50.594	Sarcophilus_harrisii
YOR116C	RPO31	99	50.484	ENSSFOG00015014357	polr3a	98	50.484	Scleropages_formosus
YOR116C	RPO31	99	49.931	ENSSMAG00000001780	polr3a	99	49.931	Scophthalmus_maximus
YOR116C	RPO31	99	50.138	ENSSDUG00000019840	polr3a	99	50.138	Seriola_dumerili
YOR116C	RPO31	99	50.207	ENSSLDG00000023908	polr3a	99	50.207	Seriola_lalandi_dorsalis
YOR116C	RPO31	67	61.342	ENSSARG00000009916	POLR3A	85	61.342	Sorex_araneus
YOR116C	RPO31	90	55.703	ENSSPUG00000013209	POLR3A	94	55.703	Sphenodon_punctatus
YOR116C	RPO31	98	50.245	ENSSPAG00000017712	polr3a	98	50.245	Stegastes_partitus
YOR116C	RPO31	99	50.553	ENSSSCG00000010327	POLR3A	98	50.553	Sus_scrofa
YOR116C	RPO31	99	50.035	ENSTGUG00000006423	-	98	50.035	Taeniopygia_guttata
YOR116C	RPO31	98	50.279	ENSTRUG00000013488	polr3a	97	50.279	Takifugu_rubripes
YOR116C	RPO31	99	49.793	ENSTNIG00000013151	polr3a	98	49.793	Tetraodon_nigroviridis
YOR116C	RPO31	61	73.118	ENSTBEG00000015288	POLR3A	67	73.118	Tupaia_belangeri
YOR116C	RPO31	86	66.279	ENSTTRG00000007817	POLR3A	92	66.279	Tursiops_truncatus
YOR116C	RPO31	99	49.343	ENSUAMG00000011283	POLR3A	98	49.343	Ursus_americanus
YOR116C	RPO31	99	50.450	ENSUMAG00000013913	POLR3A	98	50.450	Ursus_maritimus
YOR116C	RPO31	93	50.127	ENSVPAG00000003285	POLR3A	95	50.127	Vicugna_pacos
YOR116C	RPO31	99	50.450	ENSVVUG00000025523	POLR3A	98	50.450	Vulpes_vulpes
YOR116C	RPO31	86	48.458	ENSXETG00000018101	polr3a	99	48.458	Xenopus_tropicalis
YOR116C	RPO31	98	50.314	ENSXMAG00000015213	polr3a	99	50.214	Xiphophorus_maculatus