EuRBPDB

Description

Ensembl ID: YOR168W (Gene tree)
Gene ID: -
Gene Symbol: GLN4
Alias: -
Full Name: Glutamine tRNA synthetase%3B monomeric class I tRNA synthetase that catalyzes the specific glutaminylation of tRNA(Gln)%3B N-terminal domain proposed to be involved in enzyme-tRNA interactions
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 2430 bases
Position: chrXV:649303-651732
Accession: S000005694
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YOR168W_mRNA	tRNA-synt_1c_C	PF03950.18	4.5e-35	1	1
YOR168W_mRNA	tRNA_synt_1c_R2	PF04557.15	2.9e-16	1	1
YOR168W_mRNA	tRNA_synt_1c_R1	PF04558.15	2.9e-53	1	1
YOR168W_mRNA	tRNA-synt_1c	PF00749.21	1.3e-122	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128
23222640	Global analysis of yeast mRNPs	IC & yeast	2012 Dec 9	Mitchell SF	DOI: 10.1038/nsmb.2468

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
					(aa)

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YOR168W	GLN4	99	38.571	WBGene00001336	qars-1	98	43.478	Caenorhabditis_elegans
YOR168W	GLN4	99	40.438	ENSCING00000009130	-	99	40.438	Ciona_intestinalis
YOR168W	GLN4	99	39.535	ENSCSAVG00000006819	-	99	39.412	Ciona_savignyi
YOR168W	GLN4	99	38.942	FBgn0027090	GlnRS	99	38.267	Drosophila_melanogaster