EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

Paralogs

Orthologs

Description

Ensembl ID: YOR187W (Gene tree)
Gene ID: -
Gene Symbol: TUF1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 1314
Position: chrXV:684030-685343
Accession: S000005713
RBP type: canonical RBP
Summary: Mitochondrial translation elongation factor Tu (EF-Tu)%3B involved in fundamental pathway of mtDNA homeostasis%3B comprises both GTPase and guanine nucleotide exchange factor activities%2C while these activities are found in separate proteins in S. pombe and humans%3B rare mutations in human mitochondrial elongation factor Tu (EFTu) associated with severe lactic acidosis%2C rapidly progressive fatal encephalopathy%2C severe infantile macrocystic leukodystrophy with micropolygyria

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YOR187W_mRNA	GTP_EFTU	PF00009.27	3.4e-59	1	1
YOR187W_mRNA	MMR_HSR1	PF01926.23	2e-05	1	1
YOR187W_mRNA	GTP_EFTU_D2	PF03144.25	9.5e-21	1	1
YOR187W_mRNA	GTP_EFTU_D3	PF03143.17	2.2e-28	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
					(aa)

Gene Model

Click here to download YOR187W's gene model file

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YOR187W	TUF1	90	30.290	YPR080W	TEF1	95	30.067
YOR187W	TUF1	90	30.290	YBR118W	TEF2	95	30.067

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YOR187W	TUF1	90	62.025	ENSG00000178952	TUFM	86	62.025	Homo_sapiens
YOR187W	TUF1	94	61.071	ENSAPOG00000013385	tufm	98	58.409	Acanthochromis_polyacanthus
YOR187W	TUF1	90	61.735	ENSAMEG00000015551	TUFM	85	61.735	Ailuropoda_melanoleuca
YOR187W	TUF1	96	59.005	ENSACIG00000007388	tufm	95	59.005	Amphilophus_citrinellus
YOR187W	TUF1	94	61.071	ENSAOCG00000001032	tufm	98	58.409	Amphiprion_ocellaris
YOR187W	TUF1	94	61.071	ENSAPEG00000015751	tufm	98	58.409	Amphiprion_percula
YOR187W	TUF1	93	60.539	ENSATEG00000002905	tufm	94	57.955	Anabas_testudineus
YOR187W	TUF1	99	55.862	ENSACAG00000005399	TUFM	92	55.862	Anolis_carolinensis
YOR187W	TUF1	90	62.755	ENSANAG00000022206	TUFM	85	62.755	Aotus_nancymaae
YOR187W	TUF1	95	59.809	ENSACLG00000007403	tufm	87	59.165	Astatotilapia_calliptera
YOR187W	TUF1	90	62.245	ENSBTAG00000019216	TUFM	86	62.245	Bos_taurus
YOR187W	TUF1	91	54.839	WBGene00007000	tufm-1	80	54.839	Caenorhabditis_elegans
YOR187W	TUF1	90	62.245	ENSCJAG00000006236	TUFM	85	62.245	Callithrix_jacchus
YOR187W	TUF1	90	62.500	ENSCAFG00000017216	TUFM	86	62.500	Canis_familiaris
YOR187W	TUF1	90	62.500	ENSCAFG00020017574	TUFM	86	62.500	Canis_lupus_dingo
YOR187W	TUF1	90	62.500	ENSCHIG00000020583	TUFM	86	62.500	Capra_hircus
YOR187W	TUF1	90	61.224	ENSTSYG00000026053	TUFM	85	61.224	Carlito_syrichta
YOR187W	TUF1	90	61.224	ENSCPOG00000010534	TUFM	86	61.224	Cavia_porcellus
YOR187W	TUF1	90	62.500	ENSCCAG00000033296	TUFM	85	62.500	Cebus_capucinus
YOR187W	TUF1	90	62.755	ENSCATG00000035822	TUFM	85	62.755	Cercocebus_atys
YOR187W	TUF1	90	61.224	ENSCLAG00000013969	TUFM	86	61.224	Chinchilla_lanigera
YOR187W	TUF1	90	62.500	ENSCSAG00000006314	TUFM	85	62.500	Chlorocebus_sabaeus
YOR187W	TUF1	90	61.578	ENSCHOG00000009077	TUFM	85	61.578	Choloepus_hoffmanni
YOR187W	TUF1	95	59.856	ENSCPBG00000003874	TUFM	89	59.856	Chrysemys_picta_bellii
YOR187W	TUF1	98	50.930	ENSCING00000002841	-	98	50.930	Ciona_intestinalis
YOR187W	TUF1	90	54.569	ENSCSAVG00000009380	-	84	54.569	Ciona_savignyi
YOR187W	TUF1	90	62.500	ENSCANG00000035829	TUFM	85	62.500	Colobus_angolensis_palliatus
YOR187W	TUF1	90	60.660	ENSCGRG00001022949	Tufm	86	60.660	Cricetulus_griseus_chok1gshd
YOR187W	TUF1	90	60.660	ENSCGRG00000001868	-	86	60.660	Cricetulus_griseus_crigri
YOR187W	TUF1	90	42.317	ENSCGRG00000013193	-	84	42.317	Cricetulus_griseus_crigri
YOR187W	TUF1	97	59.005	ENSCSEG00000013841	tufm	97	59.005	Cynoglossus_semilaevis
YOR187W	TUF1	93	60.784	ENSCVAG00000006251	tufm	94	60.784	Cyprinodon_variegatus
YOR187W	TUF1	99	57.500	ENSDARG00000104173	tufm	97	57.500	Danio_rerio
YOR187W	TUF1	90	60.714	ENSDNOG00000047636	TUFM	85	60.714	Dasypus_novemcinctus
YOR187W	TUF1	95	48.910	ENSDORG00000023544	-	98	48.910	Dipodomys_ordii
YOR187W	TUF1	97	59.485	FBgn0024556	mEFTu1	86	59.485	Drosophila_melanogaster
YOR187W	TUF1	78	53.353	ENSETEG00000009601	TUFM	86	53.353	Echinops_telfairi
YOR187W	TUF1	91	59.848	ENSEBUG00000015907	tufm	64	59.848	Eptatretus_burgeri
YOR187W	TUF1	90	61.990	ENSEASG00005015477	TUFM	85	61.990	Equus_asinus_asinus
YOR187W	TUF1	90	61.990	ENSECAG00000019763	TUFM	86	61.990	Equus_caballus
YOR187W	TUF1	78	64.431	ENSEEUG00000001402	TUFM	86	64.431	Erinaceus_europaeus
YOR187W	TUF1	90	62.278	ENSELUG00000013410	tufm	84	62.278	Esox_lucius
YOR187W	TUF1	90	61.990	ENSFCAG00000003103	TUFM	56	61.990	Felis_catus
YOR187W	TUF1	89	57.732	ENSFDAG00000010881	TUFM	96	57.732	Fukomys_damarensis
YOR187W	TUF1	97	55.035	ENSFHEG00000020646	tufm	97	54.402	Fundulus_heteroclitus
YOR187W	TUF1	90	64.051	ENSGMOG00000014616	tufm	87	64.051	Gadus_morhua
YOR187W	TUF1	93	61.275	ENSGAFG00000004682	tufm	94	61.275	Gambusia_affinis
YOR187W	TUF1	93	61.520	ENSGACG00000012961	tufm	92	66.564	Gasterosteus_aculeatus
YOR187W	TUF1	99	58.676	ENSGAGG00000006132	TUFM	96	62.374	Gopherus_agassizii
YOR187W	TUF1	90	62.025	ENSGGOG00000014136	TUFM	86	62.025	Gorilla_gorilla
YOR187W	TUF1	93	60.784	ENSHBUG00000019031	tufm	91	57.955	Haplochromis_burtoni
YOR187W	TUF1	90	59.949	ENSHGLG00000006613	TUFM	86	59.949	Heterocephalus_glaber_female
YOR187W	TUF1	90	56.888	ENSHGLG00100004096	TUFM	85	56.888	Heterocephalus_glaber_male
YOR187W	TUF1	99	58.864	ENSHCOG00000014418	tufm	98	59.767	Hippocampus_comes
YOR187W	TUF1	90	64.051	ENSIPUG00000022457	tufm	98	59.773	Ictalurus_punctatus
YOR187W	TUF1	71	38.141	ENSIPUG00000020682	-	86	37.821	Ictalurus_punctatus
YOR187W	TUF1	90	61.929	ENSSTOG00000011837	TUFM	86	61.929	Ictidomys_tridecemlineatus
YOR187W	TUF1	95	59.330	ENSJJAG00000011840	Tufm	91	59.330	Jaculus_jaculus
YOR187W	TUF1	99	57.500	ENSKMAG00000009794	tufm	98	57.500	Kryptolebias_marmoratus
YOR187W	TUF1	93	61.520	ENSLBEG00000023735	tufm	98	58.636	Labrus_bergylta
YOR187W	TUF1	98	58.508	ENSLACG00000008242	TUFM	94	58.508	Latimeria_chalumnae
YOR187W	TUF1	89	62.404	ENSLAFG00000028911	TUFM	85	62.404	Loxodonta_africana
YOR187W	TUF1	90	62.500	ENSMFAG00000033739	TUFM	85	62.500	Macaca_fascicularis
YOR187W	TUF1	90	62.755	ENSMMUG00000003303	TUFM	85	62.755	Macaca_mulatta
YOR187W	TUF1	90	62.755	ENSMNEG00000006031	TUFM	85	62.755	Macaca_nemestrina
YOR187W	TUF1	90	62.755	ENSMLEG00000042133	TUFM	85	62.755	Mandrillus_leucophaeus
YOR187W	TUF1	93	59.804	ENSMAMG00000002053	tufm	98	57.273	Mastacembelus_armatus
YOR187W	TUF1	93	60.784	ENSMZEG00005010857	tufm	91	57.955	Maylandia_zebra
YOR187W	TUF1	90	61.480	ENSMAUG00000010490	Tufm	86	61.480	Mesocricetus_auratus
YOR187W	TUF1	90	62.500	ENSMICG00000007650	TUFM	86	62.500	Microcebus_murinus
YOR187W	TUF1	90	60.914	ENSMOCG00000010051	Tufm	86	60.914	Microtus_ochrogaster
YOR187W	TUF1	99	58.237	ENSMMOG00000012344	tufm	93	58.237	Mola_mola
YOR187W	TUF1	90	61.929	ENSMODG00000015564	TUFM	86	61.929	Monodelphis_domestica
YOR187W	TUF1	93	61.765	ENSMALG00000020254	tufm	90	61.765	Monopterus_albus
YOR187W	TUF1	90	61.168	MGP_CAROLIEiJ_G0030448	-	96	51.786	Mus_caroli
YOR187W	TUF1	90	61.168	MGP_CAROLIEiJ_G0030449	-	86	61.168	Mus_caroli
YOR187W	TUF1	90	61.168	ENSMUSG00000073838	Tufm	96	51.786	Mus_musculus
YOR187W	TUF1	90	61.168	MGP_PahariEiJ_G0013659	-	86	61.168	Mus_pahari
YOR187W	TUF1	90	61.168	MGP_PahariEiJ_G0013658	-	96	51.786	Mus_pahari
YOR187W	TUF1	90	56.148	MGP_SPRETEiJ_G0031563	-	87	56.148	Mus_spretus
YOR187W	TUF1	90	61.421	MGP_SPRETEiJ_G0031562	-	96	52.679	Mus_spretus
YOR187W	TUF1	81	60.000	ENSMPUG00000012816	TUFM	94	60.111	Mustela_putorius_furo
YOR187W	TUF1	90	61.480	ENSMLUG00000012335	-	86	61.480	Myotis_lucifugus
YOR187W	TUF1	90	61.480	ENSNGAG00000008610	Tufm	86	61.480	Nannospalax_galili
YOR187W	TUF1	82	59.889	ENSNBRG00000006466	tufm	93	60.452	Neolamprologus_brichardi
YOR187W	TUF1	90	59.184	ENSNLEG00000011063	TUFM	84	59.184	Nomascus_leucogenys
YOR187W	TUF1	74	64.615	ENSMEUG00000011131	TUFM	94	64.615	Notamacropus_eugenii
YOR187W	TUF1	90	51.654	ENSOPRG00000002318	-	85	51.654	Ochotona_princeps
YOR187W	TUF1	93	61.029	ENSONIG00000019389	tufm	98	58.182	Oreochromis_niloticus
YOR187W	TUF1	94	59.615	ENSOANG00000013114	TUFM	93	59.615	Ornithorhynchus_anatinus
YOR187W	TUF1	90	62.245	ENSOCUG00000002683	TUFM	85	62.245	Oryctolagus_cuniculus
YOR187W	TUF1	99	57.955	ENSORLG00000011497	tufm	98	57.955	Oryzias_latipes
YOR187W	TUF1	99	57.955	ENSORLG00020013437	tufm	98	57.955	Oryzias_latipes_hni
YOR187W	TUF1	99	57.727	ENSORLG00015003107	tufm	98	57.727	Oryzias_latipes_hsok
YOR187W	TUF1	99	57.273	ENSOMEG00000016958	tufm	98	57.273	Oryzias_melastigma
YOR187W	TUF1	90	60.969	ENSOGAG00000006875	TUFM	86	60.969	Otolemur_garnettii
YOR187W	TUF1	90	62.500	ENSOARG00000002357	TUFM	93	62.500	Ovis_aries
YOR187W	TUF1	90	62.025	ENSPPAG00000035168	TUFM	86	62.025	Pan_paniscus
YOR187W	TUF1	90	61.990	ENSPPRG00000014248	TUFM	85	61.990	Panthera_pardus
YOR187W	TUF1	90	62.245	ENSPTIG00000009980	TUFM	91	62.245	Panthera_tigris_altaica
YOR187W	TUF1	90	62.025	ENSPTRG00000007939	TUFM	86	62.025	Pan_troglodytes
YOR187W	TUF1	90	62.500	ENSPANG00000019624	TUFM	85	62.500	Papio_anubis
YOR187W	TUF1	95	59.806	ENSPKIG00000023809	tufm	89	59.806	Paramormyrops_kingsleyae
YOR187W	TUF1	71	58.710	ENSPSIG00000005302	TUFM	97	58.710	Pelodiscus_sinensis
YOR187W	TUF1	92	60.988	ENSPMGG00000015631	tufm	95	60.988	Periophthalmus_magnuspinnatus
YOR187W	TUF1	90	61.224	ENSPEMG00000012208	Tufm	86	61.224	Peromyscus_maniculatus_bairdii
YOR187W	TUF1	99	57.870	ENSPCIG00000025208	TUFM	93	57.870	Phascolarctos_cinereus
YOR187W	TUF1	95	61.098	ENSPFOG00000007043	tufm	90	62.255	Poecilia_formosa
YOR187W	TUF1	93	62.500	ENSPLAG00000014372	tufm	90	62.500	Poecilia_latipinna
YOR187W	TUF1	93	62.255	ENSPMEG00000019508	tufm	90	62.255	Poecilia_mexicana
YOR187W	TUF1	98	60.373	ENSPMEG00000014520	-	96	60.373	Poecilia_mexicana
YOR187W	TUF1	93	62.010	ENSPREG00000013913	tufm	94	60.185	Poecilia_reticulata
YOR187W	TUF1	90	62.500	ENSPPYG00000007226	TUFM	85	62.500	Pongo_abelii
YOR187W	TUF1	90	58.524	ENSPCAG00000015294	TUFM	85	58.524	Procavia_capensis
YOR187W	TUF1	90	62.245	ENSPCOG00000012267	TUFM	85	62.245	Propithecus_coquereli
YOR187W	TUF1	93	60.539	ENSPNYG00000008905	tufm	98	57.727	Pundamilia_nyererei
YOR187W	TUF1	92	61.634	ENSPNAG00000018881	tufm	98	58.182	Pygocentrus_nattereri
YOR187W	TUF1	90	61.168	ENSRNOG00000018604	Tufm	86	61.168	Rattus_norvegicus
YOR187W	TUF1	57	61.200	ENSRBIG00000036713	-	91	61.200	Rhinopithecus_bieti
YOR187W	TUF1	90	60.500	ENSRBIG00000042008	-	87	60.500	Rhinopithecus_bieti
YOR187W	TUF1	90	62.500	ENSRROG00000036858	-	85	62.500	Rhinopithecus_roxellana
YOR187W	TUF1	56	70.325	ENSRROG00000044977	-	66	70.325	Rhinopithecus_roxellana
YOR187W	TUF1	94	60.000	ENSSBOG00000026542	TUFM	90	60.000	Saimiri_boliviensis_boliviensis
YOR187W	TUF1	90	62.437	ENSSHAG00000012121	TUFM	90	62.437	Sarcophilus_harrisii
YOR187W	TUF1	90	62.278	ENSSFOG00015013352	tufm	88	62.278	Scleropages_formosus
YOR187W	TUF1	99	58.581	ENSSMAG00000010053	tufm	97	58.581	Scophthalmus_maximus
YOR187W	TUF1	95	59.233	ENSSDUG00000016896	tufm	98	57.955	Seriola_dumerili
YOR187W	TUF1	95	60.287	ENSSLDG00000006494	tufm	98	58.182	Seriola_lalandi_dorsalis
YOR187W	TUF1	78	64.723	ENSSARG00000011228	TUFM	90	64.723	Sorex_araneus
YOR187W	TUF1	95	54.567	ENSSPUG00000016312	TUFM	94	54.567	Sphenodon_punctatus
YOR187W	TUF1	94	61.800	ENSSPAG00000009936	tufm	96	59.091	Stegastes_partitus
YOR187W	TUF1	90	61.990	ENSSSCG00000007803	TUFM	86	61.990	Sus_scrofa
YOR187W	TUF1	99	57.955	ENSTRUG00000008300	tufm	98	57.955	Takifugu_rubripes
YOR187W	TUF1	90	57.908	ENSTBEG00000015029	TUFM	84	59.184	Tupaia_belangeri
YOR187W	TUF1	63	63.406	ENSTTRG00000001980	-	100	63.406	Tursiops_truncatus
YOR187W	TUF1	59	58.140	ENSTTRG00000005930	-	57	58.140	Tursiops_truncatus
YOR187W	TUF1	90	61.990	ENSUAMG00000001471	TUFM	86	61.990	Ursus_americanus
YOR187W	TUF1	90	62.245	ENSUMAG00000009341	TUFM	95	62.245	Ursus_maritimus
YOR187W	TUF1	63	63.043	ENSVPAG00000009541	TUFM	100	63.043	Vicugna_pacos
YOR187W	TUF1	90	62.500	ENSVVUG00000024170	TUFM	86	62.500	Vulpes_vulpes
YOR187W	TUF1	93	61.765	ENSXMAG00000011848	tufm	92	61.765	Xiphophorus_maculatus