EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
YOR243C (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Saccharomyces_cerevisiae
Status
confidence
Strand
Minus strand
Length
2031
Position
chrXV:790211-792241
Accession
S000005769
RBP type
canonical RBP
Summary
Pseudouridine synthase%3B catalyzes pseudouridylation at positions 35 and 56 in U2 snRNA%2C position 50 in 5S rRNA%2C position 13 in cytoplasmic tRNAs%2C and position 35 in pre-tRNA(Tyr)%3B also pseudouridylates some mRNAs%3B relocates from nucleus to cytoplasm during heat shock and differentially modifies some mRNAs during heat shock%3B conserved in archaea%2C vertebrates%2C and some bacteria
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
YOR243C_mRNATruDPF01142.184.3e-7511
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26632259The RNA-binding proteomes from yeast to man harbour conserved enigmRBPsRIC.PAR_CL & yeast2015 Dec 3Beckmann BMDOI: 10.1038/ncomms10127
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
(aa)
Gene Model
Click here to download YOR243C's gene model file
Protein-Protein Interaction (PPI)

Clik here to download YOR243C's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
YOR243C-9336.435ENSG00000091127PUS78235.962Homo_sapiens
YOR243C-6330.947ENSG00000129317PUS7L9934.868Homo_sapiens
YOR243C-9335.165ENSAPOG00000008645pus78735.793Acanthochromis_polyacanthus
YOR243C-9336.693ENSAMEG00000013229PUS78036.220Ailuropoda_melanoleuca
YOR243C-9335.285ENSACIG00000019006pus78635.285Amphilophus_citrinellus
YOR243C-9335.387ENSAOCG00000013110pus78735.387Amphiprion_ocellaris
YOR243C-9335.489ENSAPEG00000007260pus78735.489Amphiprion_percula
YOR243C-9335.331ENSATEG00000019185pus78635.322Anabas_testudineus
YOR243C-6530.269ENSAPLG00000012601PUS7L9330.269Anas_platyrhynchos
YOR243C-9336.520ENSAPLG00000005024PUS78236.520Anas_platyrhynchos
YOR243C-9336.392ENSACAG00000014447PUS78336.392Anolis_carolinensis
YOR243C-9336.120ENSANAG00000035204PUS78235.580Aotus_nancymaae
YOR243C-9334.913ENSACLG00000026503pus78734.913Astatotilapia_calliptera
YOR243C-9336.478ENSAMXG00000014361pus78636.478Astyanax_mexicanus
YOR243C-6531.473ENSBTAG00000004718PUS7L5731.473Bos_taurus
YOR243C-9336.435ENSBTAG00000007743PUS78235.962Bos_taurus
YOR243C-9335.962ENSCJAG00000016081PUS78235.423Callithrix_jacchus
YOR243C-9336.751ENSCAFG00000004035PUS77136.278Canis_familiaris
YOR243C-6630.464ENSCHIG00000011359PUS7L5730.464Capra_hircus
YOR243C-9336.435ENSCHIG00000021531PUS78235.962Capra_hircus
YOR243C-9335.938ENSTSYG00000007882PUS78235.938Carlito_syrichta
YOR243C-6531.685ENSTSYG00000000167PUS7L5631.685Carlito_syrichta
YOR243C-7539.655ENSCAPG00000012674PUS77539.655Cavia_aperea
YOR243C-9336.535ENSCPOG00000004705PUS78336.535Cavia_porcellus
YOR243C-9333.912ENSCCAG00000031558PUS78133.438Cebus_capucinus
YOR243C-9336.435ENSCATG00000044868PUS77635.962Cercocebus_atys
YOR243C-9336.006ENSCLAG00000005275PUS78335.804Chinchilla_lanigera
YOR243C-9336.435ENSCSAG00000011530PUS78035.962Chlorocebus_sabaeus
YOR243C-6531.390ENSCHOG00000000787PUS7L9231.390Choloepus_hoffmanni
YOR243C-9336.478ENSCPBG00000001198PUS76649.057Chrysemys_picta_bellii
YOR243C-6430.736ENSCING00000007277-9930.736Ciona_intestinalis
YOR243C-9233.750ENSCING00000008194-9233.750Ciona_intestinalis
YOR243C-9332.253ENSCSAVG00000010678-9832.253Ciona_savignyi
YOR243C-9336.435ENSCANG00000041689PUS78235.962Colobus_angolensis_palliatus
YOR243C-9336.792ENSCGRG00001011955Pus78336.792Cricetulus_griseus_chok1gshd
YOR243C-9336.792ENSCGRG00000000387Pus78336.792Cricetulus_griseus_crigri
YOR243C-9634.909ENSCSEG00000009505pus79134.909Cynoglossus_semilaevis
YOR243C-9334.755ENSCVAG00000007338pus78634.755Cyprinodon_variegatus
YOR243C-9335.703ENSDARG00000031774pus79832.222Danio_rerio
YOR243C-9335.443ENSDNOG00000007868PUS78235.443Dasypus_novemcinctus
YOR243C-9336.050ENSDORG00000014545Pus78435.747Dipodomys_ordii
YOR243C-9331.618FBgn0035901CG67458731.618Drosophila_melanogaster
YOR243C-5630.603ENSETEG00000000429PUS7L5030.603Echinops_telfairi
YOR243C-9334.385ENSETEG00000009791PUS78234.227Echinops_telfairi
YOR243C-9334.646ENSEBUG00000006182pus77334.526Eptatretus_burgeri
YOR243C-9336.378ENSEASG00005017408PUS78236.378Equus_asinus_asinus
YOR243C-6831.064ENSECAG00000011182PUS7L6930.851Equus_caballus
YOR243C-8353.191ENSECAG00000011144PUS77953.191Equus_caballus
YOR243C-6051.064ENSEEUG00000014173PUS75851.064Erinaceus_europaeus
YOR243C-9633.231ENSELUG00000008521pus78633.231Esox_lucius
YOR243C-9336.120ENSFCAG00000019145PUS78236.120Felis_catus
YOR243C-9336.207ENSFALG00000010323PUS78436.207Ficedula_albicollis
YOR243C-6531.027ENSFALG00000010205PUS7L9931.027Ficedula_albicollis
YOR243C-9336.120ENSFDAG00000016064PUS78335.647Fukomys_damarensis
YOR243C-9334.748ENSFHEG00000018282pus78534.123Fundulus_heteroclitus
YOR243C-9333.697ENSGMOG00000004874pus79333.904Gadus_morhua
YOR243C-9336.520ENSGALG00000008132PUS78336.520Gallus_gallus
YOR243C-9334.851ENSGAFG00000002980pus78634.851Gambusia_affinis
YOR243C-9334.953ENSGACG00000003840pus79435.165Gasterosteus_aculeatus
YOR243C-9336.220ENSGAGG00000006756PUS78436.220Gopherus_agassizii
YOR243C-9336.435ENSGGOG00000011898PUS78235.962Gorilla_gorilla
YOR243C-9334.913ENSHBUG00000015448pus78734.913Haplochromis_burtoni
YOR243C-9336.435ENSHGLG00000015697PUS78335.962Heterocephalus_glaber_female
YOR243C-9336.435ENSHGLG00100011745PUS78335.962Heterocephalus_glaber_male
YOR243C-9334.439ENSHCOG00000005361pus78734.439Hippocampus_comes
YOR243C-9634.290ENSIPUG00000015465pus78834.230Ictalurus_punctatus
YOR243C-9335.893ENSSTOG00000004974PUS78235.893Ictidomys_tridecemlineatus
YOR243C-9333.386ENSJJAG00000019164Pus78133.386Jaculus_jaculus
YOR243C-9336.063ENSKMAG00000013311pus78736.063Kryptolebias_marmoratus
YOR243C-9333.020ENSLBEG00000011849pus78133.020Labrus_bergylta
YOR243C-9333.697ENSLACG00000001737PUS78433.737Latimeria_chalumnae
YOR243C-7633.204ENSLOCG00000015489pus79133.204Lepisosteus_oculatus
YOR243C-9336.751ENSLAFG00000017478PUS78336.751Loxodonta_africana
YOR243C-6530.942ENSLAFG00000001661PUS7L5730.942Loxodonta_africana
YOR243C-9336.435ENSMFAG00000046201PUS77635.962Macaca_fascicularis
YOR243C-9336.593ENSMMUG00000017575PUS77636.120Macaca_mulatta
YOR243C-9336.593ENSMNEG00000041563PUS78235.962Macaca_nemestrina
YOR243C-9336.435ENSMLEG00000001039PUS78235.962Mandrillus_leucophaeus
YOR243C-9335.118ENSMAMG00000023153pus78735.276Mastacembelus_armatus
YOR243C-9334.913ENSMZEG00005009209pus78734.755Maylandia_zebra
YOR243C-6530.493ENSMGAG00000009498PUS7L7130.493Meleagris_gallopavo
YOR243C-9336.435ENSMGAG00000006721PUS78236.435Meleagris_gallopavo
YOR243C-9336.950ENSMAUG00000008206Pus78337.125Mesocricetus_auratus
YOR243C-9336.435ENSMICG00000010938PUS78235.962Microcebus_murinus
YOR243C-9336.321ENSMOCG00000019335Pus78236.834Microtus_ochrogaster
YOR243C-9335.127ENSMMOG00000000935pus78535.127Mola_mola
YOR243C-9335.636ENSMALG00000013492pus78735.636Monopterus_albus
YOR243C-9335.893MGP_CAROLIEiJ_G0026999Pus79543.478Mus_caroli
YOR243C-9336.207ENSMUSG00000057541Pus79543.478Mus_musculus
YOR243C-9335.737MGP_PahariEiJ_G0021771Pus79542.935Mus_pahari
YOR243C-9336.364MGP_SPRETEiJ_G0027995Pus79543.478Mus_spretus
YOR243C-8936.184ENSMPUG00000018259PUS79836.184Mustela_putorius_furo
YOR243C-9336.435ENSMLUG00000004941PUS78135.692Myotis_lucifugus
YOR243C-8230.702ENSNGAG00000005138Pus7l7330.702Nannospalax_galili
YOR243C-9336.207ENSNGAG00000023354Pus78336.207Nannospalax_galili
YOR243C-9334.597ENSNBRG00000019065pus78734.597Neolamprologus_brichardi
YOR243C-9336.435ENSNLEG00000008956PUS78235.962Nomascus_leucogenys
YOR243C-6531.166ENSNLEG00000017934PUS7L9930.645Nomascus_leucogenys
YOR243C-9335.489ENSODEG00000001435PUS78335.489Octodon_degus
YOR243C-9335.387ENSONIG00000008804pus78735.387Oreochromis_niloticus
YOR243C-9336.551ENSOANG00000003163PUS78136.551Ornithorhynchus_anatinus
YOR243C-9336.593ENSOCUG00000029160PUS77636.593Oryctolagus_cuniculus
YOR243C-9335.276ENSORLG00000002656pus77835.433Oryzias_latipes
YOR243C-9335.535ENSORLG00020019416pus78135.016Oryzias_latipes_hni
YOR243C-9334.961ENSORLG00015012352pus78634.961Oryzias_latipes_hsok
YOR243C-9334.913ENSOMEG00000008389pus78634.913Oryzias_melastigma
YOR243C-6531.390ENSOGAG00000028696PUS7L5731.390Otolemur_garnettii
YOR243C-9336.264ENSOARG00000003160PUS77635.793Ovis_aries
YOR243C-6630.684ENSOARG00000019691PUS7L5730.684Ovis_aries
YOR243C-9336.435ENSPPAG00000043532PUS78235.962Pan_paniscus
YOR243C-9336.120ENSPPRG00000021307PUS78236.120Panthera_pardus
YOR243C-9336.120ENSPTIG00000018973PUS78236.120Panthera_tigris_altaica
YOR243C-9336.435ENSPTRG00000019565PUS78235.962Pan_troglodytes
YOR243C-9336.593ENSPTRG00000043961-8236.120Pan_troglodytes
YOR243C-9333.123ENSPANG00000014230PUS78132.650Papio_anubis
YOR243C-9334.796ENSPKIG00000007013pus78534.796Paramormyrops_kingsleyae
YOR243C-9636.073ENSPSIG00000004034PUS78636.073Pelodiscus_sinensis
YOR243C-9333.805ENSPMGG00000018583pus78633.805Periophthalmus_magnuspinnatus
YOR243C-7740.506ENSPEMG00000022616Pus77740.506Peromyscus_maniculatus_bairdii
YOR243C-9336.364ENSPCIG00000013543PUS76150.943Phascolarctos_cinereus
YOR243C-9335.443ENSPLAG00000015182pus78635.443Poecilia_latipinna
YOR243C-9334.810ENSPMEG00000006466pus78634.810Poecilia_mexicana
YOR243C-9335.285ENSPREG00000019080pus78635.285Poecilia_reticulata
YOR243C-9333.912ENSPPYG00000017891PUS78133.912Pongo_abelii
YOR243C-6440.127ENSPCAG00000004241PUS75840.127Procavia_capensis
YOR243C-9336.076ENSPCOG00000027014PUS78236.076Propithecus_coquereli
YOR243C-6532.054ENSPCOG00000025211PUS7L5632.054Propithecus_coquereli
YOR243C-9333.438ENSPVAG00000003679PUS78233.438Pteropus_vampyrus
YOR243C-9334.913ENSPNYG00000006752pus78734.913Pundamilia_nyererei
YOR243C-9734.894ENSPNAG00000010812pus78135.312Pygocentrus_nattereri
YOR243C-9335.950ENSRNOG00000010572Pus78235.950Rattus_norvegicus
YOR243C-9333.229ENSRBIG00000012520PUS78232.759Rhinopithecus_bieti
YOR243C-9336.435ENSRROG00000042960PUS78235.962Rhinopithecus_roxellana
YOR243C-9336.278ENSSBOG00000030836PUS78235.804Saimiri_boliviensis_boliviensis
YOR243C-9334.700ENSSHAG00000008584PUS78234.858Sarcophilus_harrisii
YOR243C-9335.591ENSSFOG00015002315pus78536.220Scleropages_formosus
YOR243C-9335.377ENSSMAG00000007173pus78736.006Scophthalmus_maximus
YOR243C-9335.118ENSSDUG00000023238pus78633.754Seriola_dumerili
YOR243C-9335.285ENSSLDG00000023664pus78735.285Seriola_lalandi_dorsalis
YOR243C-6635.412ENSSARG00000013253PUS76235.412Sorex_araneus
YOR243C-6630.377ENSSPUG00000009294PUS7L8337.415Sphenodon_punctatus
YOR243C-9335.580ENSSPUG00000018496PUS78335.580Sphenodon_punctatus
YOR243C-9234.968ENSSPAG00000022258pus78635.433Stegastes_partitus
YOR243C-8230.195ENSSSCG00000000800PUS7L7330.195Sus_scrofa
YOR243C-9335.804ENSSSCG00000015428PUS77835.804Sus_scrofa
YOR243C-9336.406ENSTGUG00000002961PUS79236.406Taeniopygia_guttata
YOR243C-9334.483ENSTRUG00000016532pus78334.483Takifugu_rubripes
YOR243C-9335.110ENSTNIG00000015967pus79135.110Tetraodon_nigroviridis
YOR243C-7334.081ENSTBEG00000004158-6434.081Tupaia_belangeri
YOR243C-9335.804ENSTTRG00000001476PUS78235.804Tursiops_truncatus
YOR243C-6631.034ENSTTRG00000010169PUS7L5931.034Tursiops_truncatus
YOR243C-9336.050ENSUMAG00000018369PUS78835.377Ursus_maritimus
YOR243C-9333.386ENSVPAG00000008585PUS78233.333Vicugna_pacos
YOR243C-6730.407ENSVVUG00000016965PUS7L6530.407Vulpes_vulpes
YOR243C-9336.478ENSVVUG00000014455PUS78236.435Vulpes_vulpes
YOR243C-9337.084ENSXETG00000023207pus78337.084Xenopus_tropicalis
YOR243C-9334.597ENSXCOG00000020897pus78534.597Xiphophorus_couchianus
YOR243C-9334.755ENSXMAG00000012668pus78234.755Xiphophorus_maculatus

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