EuRBPDB

Description

Ensembl ID: YOR258W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 654
Position: chrXV:811671-812324
Accession: S000005784
RBP type: canonical RBP
Summary: DNA 5' AMP hydrolase involved in DNA repair%3B member of the histidine triad (HIT) superfamily of nucleotide-binding proteins%3B homolog of Aprataxin%2C a Hint related protein that is mutated in individuals with ataxia with oculomotor apraxia%3B relative distribution to nuclear foci decreases upon DNA replication stress

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YOR258W_mRNA	DcpS_C	PF11969.8	4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
					(aa)

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YOR258W	-	88	31.795	ENSACIG00000002035	aptx	51	32.308	Amphilophus_citrinellus
YOR258W	-	94	30.622	ENSCSEG00000009549	aptx	51	30.622	Cynoglossus_semilaevis
YOR258W	-	94	30.986	ENSGMOG00000012505	aptx	52	30.986	Gadus_morhua
YOR258W	-	96	32.857	ENSGAFG00000005086	aptx	52	31.905	Gambusia_affinis
YOR258W	-	96	32.075	ENSHCOG00000018216	aptx	53	30.660	Hippocampus_comes
YOR258W	-	88	30.612	ENSLBEG00000015353	aptx	55	30.144	Labrus_bergylta
YOR258W	-	97	31.776	ENSMMOG00000007028	aptx	53	31.308	Mola_mola
YOR258W	-	96	31.754	ENSPFOG00000005131	-	52	32.227	Poecilia_formosa
YOR258W	-	96	31.754	ENSPFOG00000004992	aptx	52	32.227	Poecilia_formosa
YOR258W	-	96	31.754	ENSPLAG00000007960	APTX	52	32.227	Poecilia_latipinna
YOR258W	-	96	31.754	ENSPLAG00000007906	aptx	52	32.227	Poecilia_latipinna
YOR258W	-	96	31.429	ENSPMEG00000018504	aptx	52	31.905	Poecilia_mexicana
YOR258W	-	96	31.429	ENSPMEG00000019789	APTX	52	31.905	Poecilia_mexicana
YOR258W	-	90	31.156	ENSPREG00000004375	aptx	55	31.658	Poecilia_reticulata
YOR258W	-	96	30.660	ENSSDUG00000001989	aptx	53	31.132	Seriola_dumerili
YOR258W	-	96	31.132	ENSSLDG00000004915	aptx	52	31.604	Seriola_lalandi_dorsalis
YOR258W	-	98	33.028	ENSTRUG00000009794	aptx	53	32.407	Takifugu_rubripes
YOR258W	-	96	32.857	ENSXCOG00000005020	aptx	50	31.905	Xiphophorus_couchianus
YOR258W	-	96	32.857	ENSXMAG00000022086	aptx	50	31.905	Xiphophorus_maculatus