EuRBPDB

Description

Ensembl ID: YOR294W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 612
Position: chrXV:868340-868951
Accession: S000005820
RBP type: canonical RBP
Summary: Essential protein that binds ribosomal protein L11%3B required for nuclear export of the 60S pre-ribosomal subunit during ribosome biogenesis%3B localizes to the nucleolus and in foci along nuclear periphery%3B cooperates with Ebp2p and Mps3p to mediate telomere clustering by binding Sir4p%2C but is not involved in telomere tethering%3B mouse homolog shows altered expression in Huntington's disease model mice

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YOR294W_mRNA	RRS1	PF04939.12	5.7e-61	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
					(aa)

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YOR294W	-	78	42.236	ENSCING00000002177	-	54	38.889	Ciona_intestinalis
YOR294W	-	75	42.857	ENSCSAVG00000011819	-	52	38.220	Ciona_savignyi
YOR294W	-	95	38.660	ENSCGRG00001015575	-	50	38.660	Cricetulus_griseus_chok1gshd
YOR294W	-	95	38.660	ENSDARG00000003941	rrs1	50	38.660	Danio_rerio
YOR294W	-	95	37.629	ENSECAG00000004492	RRS1	52	37.629	Equus_caballus
YOR294W	-	93	38.095	ENSGALG00000030890	RRS1	50	36.979	Gallus_gallus
YOR294W	-	99	38.614	ENSIPUG00000014412	rrs1	51	38.614	Ictalurus_punctatus
YOR294W	-	95	34.375	ENSKMAG00000008238	rrs1	51	34.375	Kryptolebias_marmoratus
YOR294W	-	93	36.126	ENSONIG00000014187	rrs1	50	36.126	Oreochromis_niloticus
YOR294W	-	95	36.979	ENSPKIG00000007953	rrs1	50	37.500	Paramormyrops_kingsleyae
YOR294W	-	95	36.979	ENSPFOG00000020722	rrs1	53	36.979	Poecilia_formosa
YOR294W	-	95	38.660	ENSPPYG00000018637	RRS1	58	38.660	Pongo_abelii
YOR294W	-	99	37.745	ENSPNAG00000021707	rrs1	51	37.745	Pygocentrus_nattereri
YOR294W	-	95	38.144	ENSTRUG00000008796	rrs1	53	38.144	Takifugu_rubripes
YOR294W	-	95	36.598	ENSTNIG00000004026	rrs1	51	36.598	Tetraodon_nigroviridis