EuRBPDB

Description

Ensembl ID: YOR319W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: U2-snRNP associated splicing factor%3B similar to the mammalian splicing factor SAP49%3B proposed to function as a U2-snRNP assembly factor along with Hsh155p and binding partner Cus1p%3B contains two RNA recognition motifs (RRM)
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 642 bases
Position: chrXV:912822-913463
Accession: S000005846
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YOR319W_mRNA	RRM_1	PF00076.22	6.7e-29	1	2
YOR319W_mRNA	RRM_1	PF00076.22	6.7e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
					(aa)

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YOR319W	-	91	37.949	ENSG00000143368	SF3B4	79	37.195	Homo_sapiens
YOR319W	-	91	37.436	ENSACIG00000018455	sf3b4	54	37.436	Amphilophus_citrinellus
YOR319W	-	75	33.951	ENSCSAVG00000007809	-	79	33.951	Ciona_savignyi
YOR319W	-	91	36.410	FBgn0015818	Spx	53	35.859	Drosophila_melanogaster
YOR319W	-	91	37.949	ENSGMOG00000002519	sf3b4	53	37.949	Gadus_morhua
YOR319W	-	91	37.436	ENSLACG00000004436	SF3B4	50	37.436	Latimeria_chalumnae
YOR319W	-	76	37.195	ENSPSIG00000009565	SF3B4	55	37.195	Pelodiscus_sinensis
YOR319W	-	92	37.374	ENSPLAG00000001401	sf3b4	51	37.374	Poecilia_latipinna
YOR319W	-	91	37.949	ENSTGUG00000004470	SF3B4	72	37.949	Taeniopygia_guttata