EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YOR361C (Gene tree)
Gene ID: -
Gene Symbol: PRT1
Alias: CDC63|DNA26
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 2292
Position: chrXV:1015361-1017652
Accession: S000005888
RBP type: canonical RBP
Summary: eIF3b subunit of the eukaryotic translation initiation factor 3 (eIF3)%3B subunit of the core complex of eIF3%3B essential for translation%3B part of a subcomplex (Prt1p-Rpg1p-Nip1p) that stimulates binding of mRNA and tRNA(i)Met to ribosomes%3B eIF3 is also involved in programmed stop codon readthrough

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YOR361C_mRNA	RRM_1	PF00076.22	2.3e-08	1	1
YOR361C_mRNA	eIF2A	PF08662.11	1.6e-27	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
					(aa)

Gene Model

Click here to download YOR361C's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YOR361C's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YOR361C	PRT1	85	31.603	ENSG00000106263	EIF3B	90	36.129	Homo_sapiens
YOR361C	PRT1	87	30.493	ENSAPOG00000002297	eif3bb	89	30.506	Acanthochromis_polyacanthus
YOR361C	PRT1	87	30.643	ENSACIG00000015396	eif3bb	92	30.460	Amphilophus_citrinellus
YOR361C	PRT1	84	30.374	ENSAOCG00000010921	eif3bb	89	30.506	Amphiprion_ocellaris
YOR361C	PRT1	84	30.374	ENSAPEG00000000844	eif3bb	89	30.655	Amphiprion_percula
YOR361C	PRT1	87	30.643	ENSATEG00000008626	eif3bb	91	30.669	Anabas_testudineus
YOR361C	PRT1	85	32.006	ENSAPLG00000016062	EIF3B	90	32.006	Anas_platyrhynchos
YOR361C	PRT1	88	30.815	ENSACAG00000008874	-	70	30.870	Anolis_carolinensis
YOR361C	PRT1	85	31.756	ENSANAG00000020360	EIF3B	73	31.756	Aotus_nancymaae
YOR361C	PRT1	87	30.643	ENSACLG00000000870	eif3bb	91	30.669	Astatotilapia_calliptera
YOR361C	PRT1	82	31.470	ENSAMXG00000009773	eif3ba	86	31.240	Astyanax_mexicanus
YOR361C	PRT1	85	31.603	ENSBTAG00000007474	EIF3B	80	30.846	Bos_taurus
YOR361C	PRT1	85	31.756	ENSCJAG00000001442	EIF3B	72	31.756	Callithrix_jacchus
YOR361C	PRT1	90	30.959	ENSCAFG00000016418	EIF3B	72	31.450	Canis_familiaris
YOR361C	PRT1	90	30.233	ENSCAFG00020020771	EIF3B	74	30.687	Canis_lupus_dingo
YOR361C	PRT1	85	31.603	ENSCHIG00000009941	EIF3B	80	30.846	Capra_hircus
YOR361C	PRT1	85	31.145	ENSTSYG00000008256	EIF3B	87	31.145	Carlito_syrichta
YOR361C	PRT1	85	31.651	ENSCPOG00000031410	-	74	31.651	Cavia_porcellus
YOR361C	PRT1	85	31.651	ENSCPOG00000012541	-	74	31.651	Cavia_porcellus
YOR361C	PRT1	85	31.756	ENSCCAG00000021556	EIF3B	88	31.177	Cebus_capucinus
YOR361C	PRT1	85	31.603	ENSCATG00000040107	EIF3B	72	31.756	Cercocebus_atys
YOR361C	PRT1	85	31.651	ENSCLAG00000006140	EIF3B	74	31.651	Chinchilla_lanigera
YOR361C	PRT1	79	31.177	ENSCSAG00000017603	EIF3B	66	31.177	Chlorocebus_sabaeus
YOR361C	PRT1	85	31.087	ENSCPBG00000020654	EIF3B	81	30.571	Chrysemys_picta_bellii
YOR361C	PRT1	85	31.756	ENSCANG00000042097	EIF3B	85	31.756	Colobus_angolensis_palliatus
YOR361C	PRT1	85	31.603	ENSCGRG00001019278	Eif3b	74	31.603	Cricetulus_griseus_chok1gshd
YOR361C	PRT1	85	31.603	ENSCGRG00000004618	Eif3b	73	31.603	Cricetulus_griseus_crigri
YOR361C	PRT1	82	31.688	ENSCSEG00000020931	eif3bb	89	31.297	Cynoglossus_semilaevis
YOR361C	PRT1	82	30.635	ENSCVAG00000015650	eif3bb	89	30.506	Cyprinodon_variegatus
YOR361C	PRT1	85	30.581	ENSDARG00000059654	eif3ba	86	30.581	Danio_rerio
YOR361C	PRT1	87	30.781	ENSDARG00000074213	eif3bb	91	30.861	Danio_rerio
YOR361C	PRT1	85	31.603	ENSDNOG00000049572	EIF3B	71	31.450	Dasypus_novemcinctus
YOR361C	PRT1	85	30.229	ENSDORG00000001401	Eif3b	73	30.229	Dipodomys_ordii
YOR361C	PRT1	85	31.202	ENSETEG00000001719	EIF3B	90	31.202	Echinops_telfairi
YOR361C	PRT1	87	31.024	ENSEBUG00000004379	eif3bb	87	31.579	Eptatretus_burgeri
YOR361C	PRT1	85	31.756	ENSEASG00005021167	EIF3B	73	31.450	Equus_asinus_asinus
YOR361C	PRT1	85	31.756	ENSECAG00000013671	EIF3B	73	31.450	Equus_caballus
YOR361C	PRT1	69	33.043	ENSEEUG00000014359	EIF3B	76	33.043	Erinaceus_europaeus
YOR361C	PRT1	87	30.861	ENSELUG00000021762	eif3bb	89	30.861	Esox_lucius
YOR361C	PRT1	90	30.959	ENSFCAG00000005392	EIF3B	72	31.756	Felis_catus
YOR361C	PRT1	85	32.006	ENSFALG00000013907	EIF3B	86	31.541	Ficedula_albicollis
YOR361C	PRT1	85	31.804	ENSFDAG00000007558	EIF3B	75	31.651	Fukomys_damarensis
YOR361C	PRT1	85	32.159	ENSGALG00000040999	EIF3B	73	32.159	Gallus_gallus
YOR361C	PRT1	53	30.348	ENSGAFG00000004114	eif3bb	86	30.348	Gambusia_affinis
YOR361C	PRT1	88	31.105	ENSGAGG00000003659	EIF3B	78	31.105	Gopherus_agassizii
YOR361C	PRT1	65	30.785	ENSGGOG00000016291	EIF3B	66	30.785	Gorilla_gorilla
YOR361C	PRT1	87	30.643	ENSHBUG00000019329	eif3bb	91	30.669	Haplochromis_burtoni
YOR361C	PRT1	85	31.957	ENSHGLG00000015253	EIF3B	74	31.957	Heterocephalus_glaber_female
YOR361C	PRT1	85	31.957	ENSHGLG00100015005	EIF3B	75	31.957	Heterocephalus_glaber_male
YOR361C	PRT1	82	31.062	ENSHCOG00000020583	eif3bb	87	30.699	Hippocampus_comes
YOR361C	PRT1	82	31.470	ENSIPUG00000018347	eif3b	88	31.138	Ictalurus_punctatus
YOR361C	PRT1	85	31.908	ENSSTOG00000021545	EIF3B	81	31.908	Ictidomys_tridecemlineatus
YOR361C	PRT1	85	31.908	ENSJJAG00000014658	Eif3b	74	31.908	Jaculus_jaculus
YOR361C	PRT1	82	31.949	ENSLACG00000010357	EIF3B	85	31.530	Latimeria_chalumnae
YOR361C	PRT1	86	30.618	ENSLOCG00000004215	eif3bb	86	31.087	Lepisosteus_oculatus
YOR361C	PRT1	85	32.116	ENSLAFG00000001540	EIF3B	75	32.116	Loxodonta_africana
YOR361C	PRT1	85	31.756	ENSMFAG00000046100	EIF3B	76	31.756	Macaca_fascicularis
YOR361C	PRT1	85	31.707	ENSMMUG00000015529	EIF3B	72	31.860	Macaca_mulatta
YOR361C	PRT1	85	31.603	ENSMNEG00000042021	EIF3B	73	31.108	Macaca_nemestrina
YOR361C	PRT1	85	31.756	ENSMLEG00000042295	EIF3B	87	31.756	Mandrillus_leucophaeus
YOR361C	PRT1	87	30.180	ENSMAMG00000008654	eif3bb	91	30.657	Mastacembelus_armatus
YOR361C	PRT1	87	30.643	ENSMZEG00005011827	eif3bb	91	30.669	Maylandia_zebra
YOR361C	PRT1	85	32.006	ENSMGAG00000002719	EIF3B	90	32.006	Meleagris_gallopavo
YOR361C	PRT1	85	31.603	ENSMAUG00000020259	Eif3b	74	31.603	Mesocricetus_auratus
YOR361C	PRT1	85	31.603	ENSMICG00000010103	EIF3B	72	31.603	Microcebus_murinus
YOR361C	PRT1	85	31.756	ENSMOCG00000000390	Eif3b	74	31.756	Microtus_ochrogaster
YOR361C	PRT1	85	31.603	ENSMODG00000009778	EIF3B	70	31.603	Monodelphis_domestica
YOR361C	PRT1	85	31.756	MGP_CAROLIEiJ_G0027948	Eif3b	73	31.756	Mus_caroli
YOR361C	PRT1	85	31.756	ENSMUSG00000056076	Eif3b	73	31.756	Mus_musculus
YOR361C	PRT1	85	31.756	MGP_PahariEiJ_G0024520	Eif3b	73	31.756	Mus_pahari
YOR361C	PRT1	85	31.756	MGP_SPRETEiJ_G0028952	Eif3b	73	31.756	Mus_spretus
YOR361C	PRT1	90	30.959	ENSMPUG00000017919	EIF3B	89	31.756	Mustela_putorius_furo
YOR361C	PRT1	85	32.116	ENSMLUG00000013740	EIF3B	86	32.116	Myotis_lucifugus
YOR361C	PRT1	85	31.756	ENSNGAG00000016188	Eif3b	74	31.756	Nannospalax_galili
YOR361C	PRT1	67	33.463	ENSMEUG00000000880	EIF3B	63	33.463	Notamacropus_eugenii
YOR361C	PRT1	79	30.846	ENSOPRG00000014504	EIF3B	82	30.846	Ochotona_princeps
YOR361C	PRT1	87	30.643	ENSONIG00000003283	eif3bb	91	30.669	Oreochromis_niloticus
YOR361C	PRT1	81	31.833	ENSOANG00000004314	EIF3B	92	31.833	Ornithorhynchus_anatinus
YOR361C	PRT1	85	31.555	ENSOCUG00000010289	EIF3B	86	31.555	Oryctolagus_cuniculus
YOR361C	PRT1	87	30.689	ENSORLG00000008861	eif3bb	91	30.713	Oryzias_latipes
YOR361C	PRT1	87	30.689	ENSORLG00020012732	eif3bb	91	30.713	Oryzias_latipes_hni
YOR361C	PRT1	87	30.689	ENSORLG00015000357	eif3bb	91	30.713	Oryzias_latipes_hsok
YOR361C	PRT1	84	30.156	ENSOMEG00000017895	eif3bb	91	30.015	Oryzias_melastigma
YOR361C	PRT1	85	30.746	ENSOARG00000005137	EIF3B	84	30.746	Ovis_aries
YOR361C	PRT1	85	31.756	ENSPPAG00000032833	EIF3B	83	31.756	Pan_paniscus
YOR361C	PRT1	90	30.959	ENSPPRG00000003071	EIF3B	75	31.603	Panthera_pardus
YOR361C	PRT1	90	30.959	ENSPTIG00000013328	EIF3B	75	31.756	Panthera_tigris_altaica
YOR361C	PRT1	85	31.603	ENSPTRG00000018860	EIF3B	76	31.603	Pan_troglodytes
YOR361C	PRT1	85	31.603	ENSPTRG00000046041	-	76	31.603	Pan_troglodytes
YOR361C	PRT1	85	31.756	ENSPANG00000014557	EIF3B	76	31.756	Papio_anubis
YOR361C	PRT1	90	30.859	ENSPKIG00000009981	eif3ba	88	31.895	Paramormyrops_kingsleyae
YOR361C	PRT1	87	30.988	ENSPKIG00000011735	eif3bb	88	30.988	Paramormyrops_kingsleyae
YOR361C	PRT1	88	31.050	ENSPSIG00000009889	EIF3B	85	31.150	Pelodiscus_sinensis
YOR361C	PRT1	87	30.952	ENSPMGG00000016466	eif3bb	89	30.952	Periophthalmus_magnuspinnatus
YOR361C	PRT1	85	31.756	ENSPEMG00000021554	Eif3b	73	31.756	Peromyscus_maniculatus_bairdii
YOR361C	PRT1	87	31.045	ENSPMAG00000005331	eif3bb	94	31.045	Petromyzon_marinus
YOR361C	PRT1	85	31.603	ENSPCIG00000009464	EIF3B	88	31.603	Phascolarctos_cinereus
YOR361C	PRT1	85	31.756	ENSPPYG00000017313	EIF3B	67	31.756	Pongo_abelii
YOR361C	PRT1	59	33.956	ENSPCAG00000010455	-	63	33.956	Procavia_capensis
YOR361C	PRT1	88	31.462	ENSPCOG00000025894	EIF3B	75	31.315	Propithecus_coquereli
YOR361C	PRT1	85	31.450	ENSPVAG00000013735	EIF3B	84	31.298	Pteropus_vampyrus
YOR361C	PRT1	61	32.135	ENSPNYG00000014859	eif3bb	75	31.589	Pundamilia_nyererei
YOR361C	PRT1	85	31.394	ENSPNAG00000021677	eif3ba	86	31.547	Pygocentrus_nattereri
YOR361C	PRT1	85	31.756	ENSRNOG00000001253	Eif3b	74	31.756	Rattus_norvegicus
YOR361C	PRT1	85	31.756	ENSRBIG00000030590	EIF3B	85	31.756	Rhinopithecus_bieti
YOR361C	PRT1	85	31.756	ENSRROG00000035023	EIF3B	76	31.756	Rhinopithecus_roxellana
YOR361C	PRT1	85	31.756	ENSSBOG00000001954	EIF3B	74	31.756	Saimiri_boliviensis_boliviensis
YOR361C	PRT1	85	31.603	ENSSHAG00000001063	EIF3B	71	31.603	Sarcophilus_harrisii
YOR361C	PRT1	89	31.040	ENSSFOG00015005824	eif3ba	89	31.501	Scleropages_formosus
YOR361C	PRT1	85	30.912	ENSSFOG00015006390	eif3bb	88	30.942	Scleropages_formosus
YOR361C	PRT1	84	30.853	ENSSDUG00000016761	eif3bb	91	30.523	Seriola_dumerili
YOR361C	PRT1	87	30.493	ENSSLDG00000022874	eif3bb	91	30.846	Seriola_lalandi_dorsalis
YOR361C	PRT1	85	31.298	ENSSARG00000006036	EIF3B	90	31.298	Sorex_araneus
YOR361C	PRT1	90	30.758	ENSSPUG00000001870	EIF3B	90	31.547	Sphenodon_punctatus
YOR361C	PRT1	87	30.493	ENSSPAG00000013403	eif3bb	91	30.523	Stegastes_partitus
YOR361C	PRT1	85	31.298	ENSSSCG00000039390	EIF3B	75	31.298	Sus_scrofa
YOR361C	PRT1	85	32.012	ENSTGUG00000008140	EIF3B	88	32.012	Taeniopygia_guttata
YOR361C	PRT1	87	30.493	ENSTRUG00000011064	eif3bb	91	30.219	Takifugu_rubripes
YOR361C	PRT1	84	30.960	ENSTNIG00000004648	eif3bb	93	30.769	Tetraodon_nigroviridis
YOR361C	PRT1	71	30.443	ENSTBEG00000012836	EIF3B	55	30.443	Tupaia_belangeri
YOR361C	PRT1	90	30.970	ENSUAMG00000000800	EIF3B	89	31.756	Ursus_americanus
YOR361C	PRT1	90	30.970	ENSUMAG00000007200	EIF3B	93	31.853	Ursus_maritimus
YOR361C	PRT1	90	30.970	ENSVVUG00000004280	EIF3B	92	31.853	Vulpes_vulpes
YOR361C	PRT1	82	32.109	ENSXETG00000020593	eif3b	86	31.587	Xenopus_tropicalis