EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YPL029W (Gene tree)
Gene ID: -
Gene Symbol: SUV3
Alias: LPB2
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 2214
Position: chrXVI:495506-497719
Accession: S000005950
RBP type: canonical RBP
Summary: ATP-dependent RNA helicase%3B component of the mitochondrial degradosome along with the RNase Dss1p%3B the degradosome associates with the ribosome and mediates RNA turnover%3B also required during splicing of the COX1 AI5_beta intron%3B expression of a processed form of human homolog SUPV3L1 carrying an N-terminal deletion of 46 amino acids rescues yeast suv3 null mutant

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YPL029W_mRNA	SUV3_C	PF12513.8	7.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YPL029W_mRNA	-	2214	-	YPL029W_mRNA	737 (aa)	-	P32580

Gene Model

Click here to download YPL029W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YPL029W's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YPL029W	SUV3	74	35.501	ENSG00000156502	SUPV3L1	68	46.448	Homo_sapiens
YPL029W	SUV3	73	33.573	ENSAPOG00000012040	supv3l1	68	33.573	Acanthochromis_polyacanthus
YPL029W	SUV3	70	34.897	ENSAMEG00000017957	SUPV3L1	65	34.897	Ailuropoda_melanoleuca
YPL029W	SUV3	74	32.804	ENSACIG00000006824	supv3l1	85	32.804	Amphilophus_citrinellus
YPL029W	SUV3	73	33.577	ENSAOCG00000022898	supv3l1	68	33.577	Amphiprion_ocellaris
YPL029W	SUV3	73	33.577	ENSAPEG00000006805	supv3l1	68	33.577	Amphiprion_percula
YPL029W	SUV3	73	33.514	ENSATEG00000021682	supv3l1	70	33.514	Anabas_testudineus
YPL029W	SUV3	68	33.973	ENSAPLG00000012258	SUPV3L1	69	33.973	Anas_platyrhynchos
YPL029W	SUV3	68	33.984	ENSACAG00000009685	SUPV3L1	63	34.165	Anolis_carolinensis
YPL029W	SUV3	70	35.460	ENSANAG00000022155	SUPV3L1	65	35.460	Aotus_nancymaae
YPL029W	SUV3	69	34.104	ENSACLG00000008303	supv3l1	64	34.104	Astatotilapia_calliptera
YPL029W	SUV3	71	32.961	ENSAMXG00000009658	supv3l1	74	32.961	Astyanax_mexicanus
YPL029W	SUV3	70	34.091	WBGene00007444	C08F8.2	84	31.458	Caenorhabditis_elegans
YPL029W	SUV3	70	34.897	ENSCJAG00000012937	SUPV3L1	65	34.897	Callithrix_jacchus
YPL029W	SUV3	70	35.647	ENSCAFG00000013839	SUPV3L1	60	35.460	Canis_familiaris
YPL029W	SUV3	74	34.912	ENSCAFG00020025942	SUPV3L1	84	34.912	Canis_lupus_dingo
YPL029W	SUV3	70	35.647	ENSCHIG00000000074	SUPV3L1	65	35.647	Capra_hircus
YPL029W	SUV3	74	34.912	ENSTSYG00000012845	SUPV3L1	70	34.912	Carlito_syrichta
YPL029W	SUV3	70	35.460	ENSCPOG00000010044	SUPV3L1	65	35.460	Cavia_porcellus
YPL029W	SUV3	70	32.083	ENSCCAG00000033975	SUPV3L1	64	32.083	Cebus_capucinus
YPL029W	SUV3	70	33.458	ENSCATG00000030043	SUPV3L1	65	33.458	Cercocebus_atys
YPL029W	SUV3	70	35.272	ENSCLAG00000010181	SUPV3L1	65	35.272	Chinchilla_lanigera
YPL029W	SUV3	70	35.647	ENSCSAG00000007811	SUPV3L1	65	35.647	Chlorocebus_sabaeus
YPL029W	SUV3	70	34.340	ENSCHOG00000008008	SUPV3L1	71	34.340	Choloepus_hoffmanni
YPL029W	SUV3	69	34.165	ENSCPBG00000000660	SUPV3L1	75	34.165	Chrysemys_picta_bellii
YPL029W	SUV3	66	33.922	ENSCING00000008091	-	75	33.922	Ciona_intestinalis
YPL029W	SUV3	70	35.647	ENSCANG00000036962	SUPV3L1	66	35.647	Colobus_angolensis_palliatus
YPL029W	SUV3	70	35.084	ENSCGRG00001020865	Supv3l1	66	35.084	Cricetulus_griseus_chok1gshd
YPL029W	SUV3	70	35.084	ENSCGRG00000014899	Supv3l1	66	35.084	Cricetulus_griseus_crigri
YPL029W	SUV3	70	32.588	ENSCSEG00000014061	supv3l1	66	32.588	Cynoglossus_semilaevis
YPL029W	SUV3	67	33.855	ENSCVAG00000009948	supv3l1	63	33.855	Cyprinodon_variegatus
YPL029W	SUV3	68	33.789	ENSDARG00000077728	supv3l1	65	33.789	Danio_rerio
YPL029W	SUV3	74	34.690	ENSDNOG00000004855	SUPV3L1	69	34.690	Dasypus_novemcinctus
YPL029W	SUV3	74	35.765	ENSDORG00000016650	Supv3l1	70	35.765	Dipodomys_ordii
YPL029W	SUV3	71	34.133	FBgn0037232	Suv3	68	34.133	Drosophila_melanogaster
YPL029W	SUV3	70	35.217	ENSEBUG00000010807	supv3l1	60	35.217	Eptatretus_burgeri
YPL029W	SUV3	70	35.272	ENSEASG00005015607	SUPV3L1	65	35.272	Equus_asinus_asinus
YPL029W	SUV3	70	35.272	ENSECAG00000016297	SUPV3L1	65	35.272	Equus_caballus
YPL029W	SUV3	69	33.144	ENSELUG00000018676	supv3l1	64	33.144	Esox_lucius
YPL029W	SUV3	70	35.460	ENSFCAG00000004921	SUPV3L1	65	35.272	Felis_catus
YPL029W	SUV3	68	34.165	ENSFALG00000013094	SUPV3L1	73	34.165	Ficedula_albicollis
YPL029W	SUV3	69	36.038	ENSFDAG00000011147	SUPV3L1	65	36.038	Fukomys_damarensis
YPL029W	SUV3	71	32.841	ENSFHEG00000011288	supv3l1	64	33.460	Fundulus_heteroclitus
YPL029W	SUV3	69	34.608	ENSGMOG00000012387	supv3l1	74	34.608	Gadus_morhua
YPL029W	SUV3	68	34.357	ENSGALG00000004197	SUPV3L1	63	34.280	Gallus_gallus
YPL029W	SUV3	68	34.489	ENSGAFG00000003909	supv3l1	74	33.156	Gambusia_affinis
YPL029W	SUV3	67	35.088	ENSGACG00000016077	supv3l1	63	35.088	Gasterosteus_aculeatus
YPL029W	SUV3	69	33.973	ENSGAGG00000015564	SUPV3L1	71	33.973	Gopherus_agassizii
YPL029W	SUV3	74	35.501	ENSGGOG00000005325	SUPV3L1	70	35.501	Gorilla_gorilla
YPL029W	SUV3	69	34.104	ENSHBUG00000017736	supv3l1	64	34.104	Haplochromis_burtoni
YPL029W	SUV3	69	35.496	ENSHGLG00000014418	SUPV3L1	64	35.496	Heterocephalus_glaber_female
YPL029W	SUV3	69	35.496	ENSHGLG00100005752	SUPV3L1	64	35.496	Heterocephalus_glaber_male
YPL029W	SUV3	71	33.271	ENSHCOG00000013962	supv3l1	66	33.271	Hippocampus_comes
YPL029W	SUV3	69	33.141	ENSIPUG00000015765	supv3l1	66	33.141	Ictalurus_punctatus
YPL029W	SUV3	70	35.084	ENSSTOG00000000503	SUPV3L1	66	35.084	Ictidomys_tridecemlineatus
YPL029W	SUV3	69	35.687	ENSJJAG00000012919	Supv3l1	65	35.687	Jaculus_jaculus
YPL029W	SUV3	73	33.816	ENSKMAG00000020644	supv3l1	69	33.816	Kryptolebias_marmoratus
YPL029W	SUV3	73	33.034	ENSLBEG00000009091	supv3l1	68	33.034	Labrus_bergylta
YPL029W	SUV3	73	32.182	ENSLACG00000008028	SUPV3L1	78	32.182	Latimeria_chalumnae
YPL029W	SUV3	69	33.526	ENSLOCG00000009159	supv3l1	65	33.015	Lepisosteus_oculatus
YPL029W	SUV3	70	35.460	ENSLAFG00000000889	SUPV3L1	65	35.460	Loxodonta_africana
YPL029W	SUV3	70	35.647	ENSMFAG00000003566	SUPV3L1	78	35.647	Macaca_fascicularis
YPL029W	SUV3	70	35.460	ENSMNEG00000016010	SUPV3L1	65	35.460	Macaca_nemestrina
YPL029W	SUV3	70	35.460	ENSMLEG00000028551	SUPV3L1	65	35.460	Mandrillus_leucophaeus
YPL029W	SUV3	73	32.734	ENSMAMG00000020254	supv3l1	68	32.734	Mastacembelus_armatus
YPL029W	SUV3	69	34.104	ENSMZEG00005011568	supv3l1	64	34.104	Maylandia_zebra
YPL029W	SUV3	68	34.682	ENSMGAG00000004251	SUPV3L1	69	34.682	Meleagris_gallopavo
YPL029W	SUV3	70	35.272	ENSMAUG00000005895	Supv3l1	66	35.272	Mesocricetus_auratus
YPL029W	SUV3	70	35.084	ENSMICG00000014955	SUPV3L1	73	35.084	Microcebus_murinus
YPL029W	SUV3	70	35.460	ENSMOCG00000013772	Supv3l1	65	35.460	Microtus_ochrogaster
YPL029W	SUV3	71	33.271	ENSMMOG00000015898	supv3l1	72	33.911	Mola_mola
YPL029W	SUV3	69	35.028	ENSMODG00000010700	SUPV3L1	67	35.028	Monodelphis_domestica
YPL029W	SUV3	70	35.460	MGP_CAROLIEiJ_G0015383	Supv3l1	66	35.460	Mus_caroli
YPL029W	SUV3	70	35.460	ENSMUSG00000020079	Supv3l1	66	35.460	Mus_musculus
YPL029W	SUV3	51	41.579	MGP_PahariEiJ_G0030799	Supv3l1	51	41.579	Mus_pahari
YPL029W	SUV3	70	35.460	MGP_SPRETEiJ_G0016195	Supv3l1	66	35.460	Mus_spretus
YPL029W	SUV3	70	35.647	ENSMPUG00000004499	SUPV3L1	64	35.460	Mustela_putorius_furo
YPL029W	SUV3	70	36.210	ENSMLUG00000012664	-	65	36.023	Myotis_lucifugus
YPL029W	SUV3	70	35.084	ENSNGAG00000001563	Supv3l1	65	35.084	Nannospalax_galili
YPL029W	SUV3	74	35.677	ENSNLEG00000011521	SUPV3L1	70	35.677	Nomascus_leucogenys
YPL029W	SUV3	69	35.714	ENSMEUG00000009010	SUPV3L1	66	35.714	Notamacropus_eugenii
YPL029W	SUV3	70	33.021	ENSOPRG00000001705	SUPV3L1	65	33.021	Ochotona_princeps
YPL029W	SUV3	70	35.272	ENSODEG00000014392	SUPV3L1	66	35.272	Octodon_degus
YPL029W	SUV3	69	33.397	ENSOANG00000008886	SUPV3L1	72	33.397	Ornithorhynchus_anatinus
YPL029W	SUV3	70	36.023	ENSOCUG00000004933	SUPV3L1	65	36.023	Oryctolagus_cuniculus
YPL029W	SUV3	71	33.520	ENSORLG00000010240	supv3l1	71	34.165	Oryzias_latipes
YPL029W	SUV3	71	33.520	ENSORLG00020004189	supv3l1	66	33.520	Oryzias_latipes_hni
YPL029W	SUV3	71	33.520	ENSORLG00015002310	supv3l1	66	33.333	Oryzias_latipes_hsok
YPL029W	SUV3	71	33.581	ENSOMEG00000004719	supv3l1	65	34.226	Oryzias_melastigma
YPL029W	SUV3	69	36.641	ENSOGAG00000005905	SUPV3L1	64	36.641	Otolemur_garnettii
YPL029W	SUV3	70	35.460	ENSOARG00000005389	SUPV3L1	78	35.460	Ovis_aries
YPL029W	SUV3	74	35.501	ENSPPAG00000034596	SUPV3L1	70	35.501	Pan_paniscus
YPL029W	SUV3	70	35.460	ENSPPRG00000004832	SUPV3L1	65	35.272	Panthera_pardus
YPL029W	SUV3	70	35.647	ENSPTIG00000004317	SUPV3L1	65	35.460	Panthera_tigris_altaica
YPL029W	SUV3	74	35.677	ENSPTRG00000002568	SUPV3L1	70	35.677	Pan_troglodytes
YPL029W	SUV3	70	35.084	ENSPANG00000022168	SUPV3L1	65	35.084	Papio_anubis
YPL029W	SUV3	74	32.496	ENSPKIG00000014484	supv3l1	69	32.496	Paramormyrops_kingsleyae
YPL029W	SUV3	69	33.526	ENSPSIG00000017997	SUPV3L1	72	33.526	Pelodiscus_sinensis
YPL029W	SUV3	68	32.054	ENSPMGG00000001235	supv3l1	69	32.054	Periophthalmus_magnuspinnatus
YPL029W	SUV3	70	35.272	ENSPEMG00000016292	-	65	35.272	Peromyscus_maniculatus_bairdii
YPL029W	SUV3	69	35.338	ENSPCIG00000015440	SUPV3L1	64	35.338	Phascolarctos_cinereus
YPL029W	SUV3	71	33.952	ENSPFOG00000015968	supv3l1	66	33.952	Poecilia_formosa
YPL029W	SUV3	71	33.952	ENSPLAG00000012582	supv3l1	66	33.952	Poecilia_latipinna
YPL029W	SUV3	71	34.137	ENSPMEG00000015003	supv3l1	66	34.137	Poecilia_mexicana
YPL029W	SUV3	71	34.137	ENSPREG00000014702	supv3l1	68	34.137	Poecilia_reticulata
YPL029W	SUV3	74	35.325	ENSPPYG00000002385	SUPV3L1	70	35.325	Pongo_abelii
YPL029W	SUV3	69	34.104	ENSPNYG00000015894	supv3l1	64	34.104	Pundamilia_nyererei
YPL029W	SUV3	71	33.024	ENSPNAG00000018698	supv3l1	68	32.900	Pygocentrus_nattereri
YPL029W	SUV3	74	35.802	ENSRNOG00000000392	Supv3l1	78	35.626	Rattus_norvegicus
YPL029W	SUV3	73	35.484	ENSRROG00000000787	SUPV3L1	69	35.484	Rhinopithecus_roxellana
YPL029W	SUV3	70	34.709	ENSSBOG00000033775	SUPV3L1	65	34.709	Saimiri_boliviensis_boliviensis
YPL029W	SUV3	69	35.849	ENSSHAG00000000910	SUPV3L1	57	35.448	Sarcophilus_harrisii
YPL029W	SUV3	69	34.104	ENSSFOG00015014751	supv3l1	73	34.104	Scleropages_formosus
YPL029W	SUV3	69	33.846	ENSSMAG00000004035	supv3l1	65	33.654	Scophthalmus_maximus
YPL029W	SUV3	71	33.769	ENSSDUG00000021594	supv3l1	66	33.769	Seriola_dumerili
YPL029W	SUV3	71	33.769	ENSSLDG00000025671	supv3l1	64	34.423	Seriola_lalandi_dorsalis
YPL029W	SUV3	68	34.113	ENSSPUG00000004216	SUPV3L1	63	34.113	Sphenodon_punctatus
YPL029W	SUV3	68	34.630	ENSSPAG00000012762	supv3l1	65	34.630	Stegastes_partitus
YPL029W	SUV3	70	35.460	ENSSSCG00000010251	SUPV3L1	78	35.460	Sus_scrofa
YPL029W	SUV3	68	34.291	ENSTGUG00000003907	SUPV3L1	82	34.291	Taeniopygia_guttata
YPL029W	SUV3	73	33.274	ENSTRUG00000001882	supv3l1	69	33.274	Takifugu_rubripes
YPL029W	SUV3	73	33.214	ENSTNIG00000013794	supv3l1	64	34.280	Tetraodon_nigroviridis
YPL029W	SUV3	66	34.531	ENSTBEG00000015538	SUPV3L1	72	34.531	Tupaia_belangeri
YPL029W	SUV3	70	35.647	ENSUAMG00000018007	SUPV3L1	72	35.460	Ursus_americanus
YPL029W	SUV3	70	35.272	ENSUMAG00000007773	SUPV3L1	78	35.272	Ursus_maritimus
YPL029W	SUV3	70	35.647	ENSVVUG00000020506	SUPV3L1	63	33.256	Vulpes_vulpes
YPL029W	SUV3	69	33.270	ENSXETG00000008852	supv3l1	70	33.270	Xenopus_tropicalis
YPL029W	SUV3	71	34.007	ENSXCOG00000012026	supv3l1	70	33.451	Xiphophorus_couchianus
YPL029W	SUV3	71	33.579	ENSXMAG00000014547	supv3l1	72	33.037	Xiphophorus_maculatus