EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YPL093W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Putative GTPase%3B associates with free 60S ribosomal subunits in the nucleolus and is required for 60S ribosomal subunit biogenesis%3B constituent of 66S pre-ribosomal particles%3B member of the ODN family of nucleolar G-proteins
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 1944 bases
Position: chrXVI:370978-372921
Accession: S000006014
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YPL093W_mRNA	NOG1	PF06858.14	2.2e-26	1	1
YPL093W_mRNA	MMR_HSR1	PF01926.23	2.6e-16	1	1
YPL093W_mRNA	NOGCT	PF08155.11	2.2e-27	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YPL093W_mRNA	-	1944	-	YPL093W_mRNA	647 (aa)	-	Q02892

Gene Model

Click here to download YPL093W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YPL093W's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YPL093W	-	99	46.202	ENSG00000107937	GTPBP4	99	62.319	Homo_sapiens
YPL093W	-	99	46.059	ENSAPOG00000020433	gtpbp4	99	44.651	Acanthochromis_polyacanthus
YPL093W	-	99	46.995	ENSAMEG00000001845	GTPBP4	99	46.995	Ailuropoda_melanoleuca
YPL093W	-	99	45.904	ENSACIG00000018629	gtpbp4	99	45.904	Amphilophus_citrinellus
YPL093W	-	99	46.368	ENSAOCG00000000427	gtpbp4	93	46.368	Amphiprion_ocellaris
YPL093W	-	99	46.368	ENSAPEG00000002544	gtpbp4	99	46.368	Amphiprion_percula
YPL093W	-	99	46.522	ENSATEG00000012635	gtpbp4	94	46.522	Anabas_testudineus
YPL093W	-	52	34.718	ENSAPLG00000013790	-	98	35.015	Anas_platyrhynchos
YPL093W	-	99	46.202	ENSACAG00000002943	GTPBP4	99	46.379	Anolis_carolinensis
YPL093W	-	99	42.284	ENSANAG00000022188	-	99	42.040	Aotus_nancymaae
YPL093W	-	80	55.249	ENSANAG00000029209	-	98	55.249	Aotus_nancymaae
YPL093W	-	69	52.679	ENSACLG00000026330	gtpbp4	92	67.333	Astatotilapia_calliptera
YPL093W	-	99	45.609	ENSAMXG00000019771	gtpbp4	99	45.609	Astyanax_mexicanus
YPL093W	-	99	46.071	ENSBTAG00000014917	GTPBP4	99	46.071	Bos_taurus
YPL093W	-	99	41.059	WBGene00020297	nog-1	99	41.059	Caenorhabditis_elegans
YPL093W	-	99	44.479	ENSCJAG00000022962	-	99	45.706	Callithrix_jacchus
YPL093W	-	99	45.399	ENSCJAG00000008494	-	99	46.626	Callithrix_jacchus
YPL093W	-	93	46.700	ENSCAFG00000005536	GTPBP4	100	46.700	Canis_familiaris
YPL093W	-	99	46.841	ENSCAFG00020004307	GTPBP4	99	46.841	Canis_lupus_dingo
YPL093W	-	99	46.225	ENSCHIG00000018346	GTPBP4	99	46.225	Capra_hircus
YPL093W	-	99	46.285	ENSTSYG00000004977	GTPBP4	99	46.285	Carlito_syrichta
YPL093W	-	98	43.546	ENSCAPG00000002134	GTPBP4	97	43.458	Cavia_aperea
YPL093W	-	99	46.379	ENSCPOG00000013736	GTPBP4	99	46.379	Cavia_porcellus
YPL093W	-	99	45.216	ENSCCAG00000021627	-	92	46.202	Cebus_capucinus
YPL093W	-	99	35.039	ENSCCAG00000030115	-	99	35.039	Cebus_capucinus
YPL093W	-	99	46.285	ENSCATG00000004303	GTPBP4	99	46.285	Cercocebus_atys
YPL093W	-	99	46.083	ENSCLAG00000011323	GTPBP4	99	46.083	Chinchilla_lanigera
YPL093W	-	99	46.285	ENSCSAG00000014097	GTPBP4	99	46.285	Chlorocebus_sabaeus
YPL093W	-	68	55.707	ENSCHOG00000012602	GTPBP4	67	55.707	Choloepus_hoffmanni
YPL093W	-	99	45.736	ENSCPBG00000008398	GTPBP4	99	45.736	Chrysemys_picta_bellii
YPL093W	-	99	45.062	ENSCING00000001957	-	99	45.525	Ciona_intestinalis
YPL093W	-	99	44.494	ENSCSAVG00000009793	-	98	57.566	Ciona_savignyi
YPL093W	-	99	45.579	ENSCANG00000014168	GTPBP4	99	45.579	Colobus_angolensis_palliatus
YPL093W	-	99	46.759	ENSCGRG00001013765	Gtpbp4	99	46.759	Cricetulus_griseus_chok1gshd
YPL093W	-	99	46.759	ENSCGRG00000012171	Gtpbp4	99	46.759	Cricetulus_griseus_crigri
YPL093W	-	99	44.668	ENSCSEG00000007352	gtpbp4	99	44.668	Cynoglossus_semilaevis
YPL093W	-	99	46.554	ENSCVAG00000008993	gtpbp4	99	46.554	Cyprinodon_variegatus
YPL093W	-	99	45.917	ENSDARG00000018961	gtpbp4	99	45.917	Danio_rerio
YPL093W	-	68	38.702	ENSDNOG00000006746	GTPBP4	100	38.926	Dasypus_novemcinctus
YPL093W	-	89	49.505	ENSDORG00000010884	Gtpbp4	96	49.505	Dipodomys_ordii
YPL093W	-	99	47.964	FBgn0028473	Non1	99	47.964	Drosophila_melanogaster
YPL093W	-	57	49.457	ENSETEG00000016840	-	65	49.457	Echinops_telfairi
YPL093W	-	98	42.543	ENSEBUG00000010311	gtpbp4	97	42.543	Eptatretus_burgeri
YPL093W	-	99	46.605	ENSEASG00005019082	GTPBP4	99	46.605	Equus_asinus_asinus
YPL093W	-	99	46.605	ENSECAG00000001700	GTPBP4	91	68.000	Equus_caballus
YPL093W	-	99	56.522	ENSEEUG00000009889	GTPBP4	90	56.522	Erinaceus_europaeus
YPL093W	-	99	47.104	ENSELUG00000008578	gtpbp4	99	45.566	Esox_lucius
YPL093W	-	99	46.687	ENSFCAG00000026213	GTPBP4	99	46.687	Felis_catus
YPL093W	-	99	46.584	ENSFALG00000006971	GTPBP4	87	46.739	Ficedula_albicollis
YPL093W	-	99	46.379	ENSFDAG00000000998	GTPBP4	99	46.379	Fukomys_damarensis
YPL093W	-	99	47.167	ENSFHEG00000012922	gtpbp4	99	47.167	Fundulus_heteroclitus
YPL093W	-	99	45.891	ENSGMOG00000016090	gtpbp4	99	45.891	Gadus_morhua
YPL093W	-	99	46.894	ENSGALG00000006703	GTPBP4	99	46.894	Gallus_gallus
YPL093W	-	99	47.304	ENSGAFG00000002075	gtpbp4	99	47.304	Gambusia_affinis
YPL093W	-	99	47.368	ENSGACG00000017481	gtpbp4	99	47.368	Gasterosteus_aculeatus
YPL093W	-	93	45.349	ENSGAGG00000018689	GTPBP4	100	45.349	Gopherus_agassizii
YPL093W	-	99	46.047	ENSGGOG00000013372	GTPBP4	99	46.047	Gorilla_gorilla
YPL093W	-	99	46.059	ENSHBUG00000000192	gtpbp4	99	46.059	Haplochromis_burtoni
YPL093W	-	99	45.929	ENSHGLG00000013071	GTPBP4	99	45.929	Heterocephalus_glaber_female
YPL093W	-	99	42.813	ENSHGLG00100002964	-	99	42.813	Heterocephalus_glaber_male
YPL093W	-	99	45.929	ENSHGLG00100017850	GTPBP4	99	45.929	Heterocephalus_glaber_male
YPL093W	-	99	46.462	ENSHCOG00000011543	gtpbp4	99	46.462	Hippocampus_comes
YPL093W	-	99	45.511	ENSIPUG00000014417	GTPBP4	99	45.511	Ictalurus_punctatus
YPL093W	-	99	46.142	ENSSTOG00000010042	-	99	46.142	Ictidomys_tridecemlineatus
YPL093W	-	99	41.860	ENSSTOG00000023023	-	99	41.860	Ictidomys_tridecemlineatus
YPL093W	-	99	46.440	ENSJJAG00000010021	Gtpbp4	99	46.440	Jaculus_jaculus
YPL093W	-	99	46.059	ENSKMAG00000021705	gtpbp4	99	46.213	Kryptolebias_marmoratus
YPL093W	-	99	45.046	ENSLBEG00000021419	gtpbp4	100	45.771	Labrus_bergylta
YPL093W	-	99	46.533	ENSLACG00000001449	GTPBP4	99	46.522	Latimeria_chalumnae
YPL093W	-	99	45.840	ENSLOCG00000012279	gtpbp4	99	45.840	Lepisosteus_oculatus
YPL093W	-	99	46.832	ENSLAFG00000018578	GTPBP4	99	46.832	Loxodonta_africana
YPL093W	-	99	46.130	ENSMFAG00000046251	GTPBP4	99	46.130	Macaca_fascicularis
YPL093W	-	99	44.272	ENSMMUG00000010813	GTPBP4	99	44.272	Macaca_mulatta
YPL093W	-	99	46.130	ENSMNEG00000044366	GTPBP4	99	46.130	Macaca_nemestrina
YPL093W	-	99	46.285	ENSMLEG00000039605	GTPBP4	99	46.285	Mandrillus_leucophaeus
YPL093W	-	99	46.512	ENSMAMG00000013763	gtpbp4	91	46.512	Mastacembelus_armatus
YPL093W	-	99	45.904	ENSMZEG00005006621	gtpbp4	99	45.904	Maylandia_zebra
YPL093W	-	99	46.914	ENSMAUG00000000571	Gtpbp4	99	46.914	Mesocricetus_auratus
YPL093W	-	99	46.440	ENSMICG00000013332	GTPBP4	99	46.440	Microcebus_murinus
YPL093W	-	99	46.759	ENSMOCG00000002209	Gtpbp4	99	46.841	Microtus_ochrogaster
YPL093W	-	99	45.137	ENSMMOG00000011257	gtpbp4	99	45.137	Mola_mola
YPL093W	-	99	46.357	ENSMODG00000005978	GTPBP4	99	46.357	Monodelphis_domestica
YPL093W	-	99	46.986	ENSMALG00000012488	gtpbp4	99	46.986	Monopterus_albus
YPL093W	-	99	46.451	MGP_CAROLIEiJ_G0018215	Gtpbp4	100	46.678	Mus_caroli
YPL093W	-	99	47.231	ENSMUSG00000021149	Gtpbp4	91	69.799	Mus_musculus
YPL093W	-	99	46.923	MGP_PahariEiJ_G0019265	Gtpbp4	99	46.923	Mus_pahari
YPL093W	-	99	47.068	MGP_SPRETEiJ_G0019073	Gtpbp4	99	47.068	Mus_spretus
YPL093W	-	93	46.370	ENSMPUG00000016221	GTPBP4	100	46.370	Mustela_putorius_furo
YPL093W	-	99	46.851	ENSMLUG00000028192	GTPBP4	99	46.851	Myotis_lucifugus
YPL093W	-	99	46.130	ENSNGAG00000015364	Gtpbp4	99	46.130	Nannospalax_galili
YPL093W	-	88	44.330	ENSNBRG00000019965	gtpbp4	98	36.977	Neolamprologus_brichardi
YPL093W	-	99	46.130	ENSNLEG00000013495	GTPBP4	99	46.130	Nomascus_leucogenys
YPL093W	-	81	56.522	ENSOPRG00000008671	GTPBP4	78	56.522	Ochotona_princeps
YPL093W	-	99	46.440	ENSODEG00000000962	-	99	46.440	Octodon_degus
YPL093W	-	99	44.907	ENSODEG00000019152	-	99	44.907	Octodon_degus
YPL093W	-	99	46.059	ENSONIG00000017707	gtpbp4	99	46.059	Oreochromis_niloticus
YPL093W	-	97	46.411	ENSOANG00000006095	-	97	46.411	Ornithorhynchus_anatinus
YPL093W	-	99	46.440	ENSOCUG00000016120	-	99	46.440	Oryctolagus_cuniculus
YPL093W	-	53	52.907	ENSOCUG00000014716	-	90	52.907	Oryctolagus_cuniculus
YPL093W	-	99	46.986	ENSORLG00000006151	gtpbp4	99	46.986	Oryzias_latipes
YPL093W	-	99	46.986	ENSORLG00020020899	gtpbp4	99	46.986	Oryzias_latipes_hni
YPL093W	-	99	46.522	ENSORLG00015020562	gtpbp4	99	46.832	Oryzias_latipes_hsok
YPL093W	-	99	46.248	ENSOMEG00000019684	gtpbp4	99	46.401	Oryzias_melastigma
YPL093W	-	99	46.202	ENSOGAG00000011941	GTPBP4	99	46.522	Otolemur_garnettii
YPL093W	-	99	45.300	ENSOARG00000015047	GTPBP4	99	46.012	Ovis_aries
YPL093W	-	99	46.047	ENSPPAG00000042066	GTPBP4	99	46.047	Pan_paniscus
YPL093W	-	99	46.687	ENSPPRG00000009895	GTPBP4	99	46.687	Panthera_pardus
YPL093W	-	99	46.841	ENSPTIG00000008569	GTPBP4	99	46.841	Panthera_tigris_altaica
YPL093W	-	70	52.000	ENSPTRG00000002236	GTPBP4	85	52.000	Pan_troglodytes
YPL093W	-	99	46.285	ENSPANG00000023543	GTPBP4	99	46.285	Papio_anubis
YPL093W	-	99	45.975	ENSPKIG00000012301	gtpbp4	99	46.368	Paramormyrops_kingsleyae
YPL093W	-	55	56.620	ENSPSIG00000005442	GTPBP4	92	56.620	Pelodiscus_sinensis
YPL093W	-	99	44.961	ENSPMGG00000001462	gtpbp4	99	45.116	Periophthalmus_magnuspinnatus
YPL093W	-	68	43.836	ENSPEMG00000012279	-	73	43.619	Peromyscus_maniculatus_bairdii
YPL093W	-	99	47.222	ENSPEMG00000015091	-	99	47.304	Peromyscus_maniculatus_bairdii
YPL093W	-	99	46.107	ENSPMAG00000000905	gtpbp4	99	46.260	Petromyzon_marinus
YPL093W	-	99	46.334	ENSPCIG00000026082	GTPBP4	99	46.285	Phascolarctos_cinereus
YPL093W	-	99	46.870	ENSPFOG00000000026	gtpbp4	99	46.870	Poecilia_formosa
YPL093W	-	86	48.850	ENSPLAG00000002898	gtpbp4	91	48.850	Poecilia_latipinna
YPL093W	-	99	46.870	ENSPMEG00000016422	gtpbp4	99	46.870	Poecilia_mexicana
YPL093W	-	99	46.095	ENSPREG00000019870	gtpbp4	99	46.095	Poecilia_reticulata
YPL093W	-	99	46.285	ENSPPYG00000002037	GTPBP4	99	46.285	Pongo_abelii
YPL093W	-	96	44.534	ENSPCOG00000014602	-	99	43.820	Propithecus_coquereli
YPL093W	-	96	44.605	ENSPCOG00000014382	-	99	44.605	Propithecus_coquereli
YPL093W	-	91	56.918	ENSPVAG00000005882	GTPBP4	86	56.740	Pteropus_vampyrus
YPL093W	-	99	41.113	ENSPNYG00000024251	gtpbp4	99	41.113	Pundamilia_nyererei
YPL093W	-	99	45.469	ENSPNAG00000019977	gtpbp4	99	45.469	Pygocentrus_nattereri
YPL093W	-	99	45.315	ENSRNOG00000016217	Gtpbp4	99	46.166	Rattus_norvegicus
YPL093W	-	99	46.594	ENSRBIG00000028875	GTPBP4	99	46.594	Rhinopithecus_bieti
YPL093W	-	99	46.594	ENSRROG00000030798	GTPBP4	99	46.594	Rhinopithecus_roxellana
YPL093W	-	99	45.399	ENSSBOG00000028421	GTPBP4	99	45.399	Saimiri_boliviensis_boliviensis
YPL093W	-	98	46.311	ENSSHAG00000014713	GTPBP4	93	46.311	Sarcophilus_harrisii
YPL093W	-	99	45.833	ENSSFOG00015003167	gtpbp4	99	45.833	Scleropages_formosus
YPL093W	-	99	45.315	ENSSMAG00000005863	gtpbp4	99	45.315	Scophthalmus_maximus
YPL093W	-	99	47.141	ENSSDUG00000006534	gtpbp4	99	47.141	Seriola_dumerili
YPL093W	-	99	46.986	ENSSLDG00000020688	gtpbp4	99	46.986	Seriola_lalandi_dorsalis
YPL093W	-	61	73.267	ENSSARG00000003409	-	79	73.267	Sorex_araneus
YPL093W	-	99	46.130	ENSSPUG00000002153	GTPBP4	99	46.130	Sphenodon_punctatus
YPL093W	-	64	36.232	ENSSPAG00000014583	gtpbp4	100	36.473	Stegastes_partitus
YPL093W	-	99	46.357	ENSSSCG00000028602	GTPBP4	99	46.512	Sus_scrofa
YPL093W	-	99	46.573	ENSTGUG00000000820	GTPBP4	100	46.729	Taeniopygia_guttata
YPL093W	-	99	45.511	ENSTRUG00000003900	gtpbp4	99	45.511	Takifugu_rubripes
YPL093W	-	99	46.296	ENSTNIG00000007992	gtpbp4	99	46.296	Tetraodon_nigroviridis
YPL093W	-	89	44.274	ENSTBEG00000003613	GTPBP4	88	43.932	Tupaia_belangeri
YPL093W	-	99	43.379	ENSTTRG00000011163	GTPBP4	99	43.379	Tursiops_truncatus
YPL093W	-	99	46.472	ENSUAMG00000013191	GTPBP4	78	69.178	Ursus_americanus
YPL093W	-	93	46.689	ENSUMAG00000016138	GTPBP4	100	46.689	Ursus_maritimus
YPL093W	-	99	46.472	ENSVVUG00000008608	GTPBP4	97	46.472	Vulpes_vulpes
YPL093W	-	99	40.649	ENSXETG00000018097	gtpbp4	99	40.649	Xenopus_tropicalis
YPL093W	-	99	43.789	ENSXCOG00000019953	gtpbp4	96	43.789	Xiphophorus_couchianus
YPL093W	-	99	47.149	ENSXMAG00000006719	gtpbp4	99	47.149	Xiphophorus_maculatus