EuRBPDB

Description

Ensembl ID: YPL131W (Gene tree)
Gene ID: -
Gene Symbol: RPL5
Alias: LPI14|RPL1
Full Name: Ribosomal 60S subunit protein L5%3B nascent Rpl5p is bound by specific chaperone Syo1p during translation%3B homologous to mammalian ribosomal protein L5 and bacterial L18%3B binds 5S rRNA and is required for 60S subunit assembly
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 894
Position: chrXVI: 303121-304014
Accession: S000006052
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
25173706	Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins	RNPxl & yeast	2014 Aug 31	Kramer K	DOI: 10.1038/nmeth.3092
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YPL131W_mRNA	-	894	-	YPL131W_mRNA	297 (aa)	-	P26321

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YPL131W	RPL5	99	52.381	WBGene00004416	rpl-5	94	54.064	Caenorhabditis_elegans
YPL131W	RPL5	98	56.849	FBgn0064225	RpL5	93	57.447	Drosophila_melanogaster
YPL131W	RPL5	99	49.488	ENSG00000122406	RPL5	100	69.841	Homo_sapiens
YPL131W	RPL5	99	49.147	ENSMUSG00000058558	Rpl5	100	53.374	Mus_musculus