EuRBPDB

Description

Ensembl ID: YPL157W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 948
Position: chrXVI:254814-255761
Accession: S000006078
RBP type: canonical RBP
Summary: Trimethyl guanosine synthase%2C conserved nucleolar methyl transferase%3B converts the m(7)G cap structure of snRNAs%2C snoRNAs%2C and telomerase TLC1 RNA to m(2%2C2%2C7)G%3B also required for nucleolar assembly and splicing of meiotic pre-mRNAs%3B interacts with Swm2p%2C which may confer substrate specificity on Tgs1p

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YPL157W_mRNA	Methyltransf_15	PF09445.10	3e-69	1	1
YPL157W_mRNA	UPF0020	PF01170.18	2e-06	1	1
YPL157W_mRNA	Methyltransf_31	PF13847.6	6.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YPL157W_mRNA	-	948	-	YPL157W_mRNA	315 (aa)	-	Q12052

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YPL157W	-	61	38.220	ENSCING00000013683	-	66	37.264	Ciona_intestinalis
YPL157W	-	57	39.227	ENSCSAVG00000011154	-	56	39.344	Ciona_savignyi
YPL157W	-	68	39.437	ENSDARG00000107511	lyn	97	38.710	Danio_rerio
YPL157W	-	57	40.782	ENSGMOG00000015087	-	89	40.782	Gadus_morhua
YPL157W	-	68	37.559	ENSGACG00000014724	-	76	42.105	Gasterosteus_aculeatus
YPL157W	-	51	41.250	ENSSPUG00000009398	-	89	41.250	Sphenodon_punctatus