EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YPL211W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Nucleolar protein required for 60S ribosome subunit biogenesis%3B constituent of 66S pre-ribosomal particles%3B physically interacts with Nop8p and the exosome subunit Rrp43p
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 546 bases
Position: chrXVI:153495-154040
Accession: S000006132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YPL211W_mRNA	UPF0113	PF03657.13	2.5e-25	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YPL211W_mRNA	-	546	-	YPL211W_mRNA	181 (aa)	-	Q08962

Gene Model

Click here to download YPL211W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YPL211W's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YPL211W	-	99	56.983	ENSG00000132603	NIP7	99	56.983	Homo_sapiens
YPL211W	-	99	56.983	ENSAPOG00000005901	nip7	99	56.983	Acanthochromis_polyacanthus
YPL211W	-	99	58.101	ENSAMEG00000007542	NIP7	99	58.101	Ailuropoda_melanoleuca
YPL211W	-	99	56.983	ENSAOCG00000017498	nip7	99	56.983	Amphiprion_ocellaris
YPL211W	-	99	56.983	ENSAPEG00000002824	nip7	99	56.983	Amphiprion_percula
YPL211W	-	99	56.983	ENSATEG00000019165	nip7	99	56.983	Anabas_testudineus
YPL211W	-	99	59.777	ENSACAG00000003476	NIP7	99	59.777	Anolis_carolinensis
YPL211W	-	99	57.542	ENSANAG00000037006	NIP7	99	57.542	Aotus_nancymaae
YPL211W	-	99	57.542	ENSACLG00000012368	nip7	99	57.542	Astatotilapia_calliptera
YPL211W	-	99	54.749	ENSAMXG00000003634	nip7	99	46.927	Astyanax_mexicanus
YPL211W	-	99	58.101	ENSBTAG00000001666	NIP7	99	58.101	Bos_taurus
YPL211W	-	99	53.631	WBGene00016607	C43E11.9	99	53.631	Caenorhabditis_elegans
YPL211W	-	99	57.542	ENSCJAG00000015364	NIP7	99	57.542	Callithrix_jacchus
YPL211W	-	99	56.983	ENSCAFG00000029835	NIP7	94	56.983	Canis_familiaris
YPL211W	-	99	58.659	ENSCHIG00000019332	-	99	58.659	Capra_hircus
YPL211W	-	99	56.983	ENSTSYG00000032526	NIP7	99	56.983	Carlito_syrichta
YPL211W	-	99	58.101	ENSCPOG00000003712	NIP7	99	58.101	Cavia_porcellus
YPL211W	-	99	57.542	ENSCCAG00000023481	NIP7	99	57.542	Cebus_capucinus
YPL211W	-	99	56.425	ENSCATG00000031010	NIP7	99	56.425	Cercocebus_atys
YPL211W	-	99	41.341	ENSCATG00000006216	-	79	41.341	Cercocebus_atys
YPL211W	-	99	57.542	ENSCLAG00000007579	NIP7	99	57.542	Chinchilla_lanigera
YPL211W	-	99	40.223	ENSCSAG00000015707	-	99	40.223	Chlorocebus_sabaeus
YPL211W	-	99	55.866	ENSCSAG00000004137	NIP7	99	55.866	Chlorocebus_sabaeus
YPL211W	-	99	50.279	ENSCHOG00000010787	NIP7	99	50.279	Choloepus_hoffmanni
YPL211W	-	99	57.542	ENSCPBG00000027051	NIP7	99	57.542	Chrysemys_picta_bellii
YPL211W	-	99	58.101	ENSCING00000006610	-	99	58.101	Ciona_intestinalis
YPL211W	-	99	58.101	ENSCSAVG00000009157	-	99	58.101	Ciona_savignyi
YPL211W	-	99	56.425	ENSCANG00000029815	NIP7	99	56.425	Colobus_angolensis_palliatus
YPL211W	-	99	57.542	ENSCGRG00001008966	-	99	57.542	Cricetulus_griseus_chok1gshd
YPL211W	-	98	48.315	ENSCGRG00001020027	-	95	48.315	Cricetulus_griseus_chok1gshd
YPL211W	-	99	51.397	ENSCGRG00001010780	-	99	51.397	Cricetulus_griseus_chok1gshd
YPL211W	-	91	48.780	ENSCGRG00000007805	-	99	48.780	Cricetulus_griseus_crigri
YPL211W	-	99	50.838	ENSCGRG00000000567	-	99	50.838	Cricetulus_griseus_crigri
YPL211W	-	99	57.542	ENSCGRG00000001344	-	99	57.542	Cricetulus_griseus_crigri
YPL211W	-	99	58.101	ENSCSEG00000011356	nip7	99	58.101	Cynoglossus_semilaevis
YPL211W	-	99	56.425	ENSCVAG00000012170	nip7	99	56.425	Cyprinodon_variegatus
YPL211W	-	99	55.866	ENSDARG00000059075	nip7	99	55.866	Danio_rerio
YPL211W	-	99	56.983	ENSDNOG00000006821	NIP7	99	56.983	Dasypus_novemcinctus
YPL211W	-	99	58.101	ENSDORG00000027163	Nip7	99	58.101	Dipodomys_ordii
YPL211W	-	99	46.667	FBgn0039233	CG7006	100	46.667	Drosophila_melanogaster
YPL211W	-	99	57.542	ENSETEG00000013549	NIP7	99	57.542	Echinops_telfairi
YPL211W	-	99	54.749	ENSEBUG00000015270	nip7	99	54.749	Eptatretus_burgeri
YPL211W	-	99	57.542	ENSEASG00005021312	NIP7	99	57.542	Equus_asinus_asinus
YPL211W	-	99	57.542	ENSECAG00000036727	NIP7	99	57.542	Equus_caballus
YPL211W	-	99	58.101	ENSEEUG00000008660	NIP7	99	58.101	Erinaceus_europaeus
YPL211W	-	99	58.101	ENSFCAG00000013574	NIP7	99	58.101	Felis_catus
YPL211W	-	88	54.375	ENSFALG00000002761	NIP7	99	54.375	Ficedula_albicollis
YPL211W	-	99	56.425	ENSFDAG00000015970	NIP7	99	56.425	Fukomys_damarensis
YPL211W	-	99	44.262	ENSFHEG00000008752	nip7	99	44.262	Fundulus_heteroclitus
YPL211W	-	91	56.707	ENSGMOG00000005786	nip7	95	56.707	Gadus_morhua
YPL211W	-	99	56.425	ENSGALG00000000650	NIP7	99	56.425	Gallus_gallus
YPL211W	-	99	57.542	ENSGAFG00000009138	nip7	99	57.542	Gambusia_affinis
YPL211W	-	99	55.866	ENSGACG00000016301	nip7	99	55.866	Gasterosteus_aculeatus
YPL211W	-	80	56.552	ENSGAGG00000000314	NIP7	98	56.552	Gopherus_agassizii
YPL211W	-	99	46.369	ENSGGOG00000007747	-	99	46.369	Gorilla_gorilla
YPL211W	-	99	56.983	ENSGGOG00000022785	NIP7	99	56.983	Gorilla_gorilla
YPL211W	-	99	57.542	ENSHBUG00000020049	nip7	99	57.542	Haplochromis_burtoni
YPL211W	-	99	57.542	ENSHGLG00000017478	NIP7	99	57.542	Heterocephalus_glaber_female
YPL211W	-	99	57.542	ENSHGLG00100005353	NIP7	99	57.542	Heterocephalus_glaber_male
YPL211W	-	99	54.749	ENSHCOG00000018004	nip7	99	54.749	Hippocampus_comes
YPL211W	-	99	56.425	ENSIPUG00000007516	nip7	99	56.425	Ictalurus_punctatus
YPL211W	-	99	57.542	ENSSTOG00000012871	NIP7	99	57.542	Ictidomys_tridecemlineatus
YPL211W	-	96	56.069	ENSJJAG00000018787	-	99	54.819	Jaculus_jaculus
YPL211W	-	99	45.810	ENSJJAG00000001553	-	99	45.810	Jaculus_jaculus
YPL211W	-	98	50.562	ENSJJAG00000017333	-	99	50.562	Jaculus_jaculus
YPL211W	-	99	57.542	ENSKMAG00000018713	nip7	99	57.542	Kryptolebias_marmoratus
YPL211W	-	99	56.983	ENSLBEG00000005274	nip7	99	56.983	Labrus_bergylta
YPL211W	-	99	59.777	ENSLACG00000006594	NIP7	99	59.777	Latimeria_chalumnae
YPL211W	-	99	59.777	ENSLOCG00000001379	nip7	99	59.777	Lepisosteus_oculatus
YPL211W	-	99	56.425	ENSLAFG00000004830	NIP7	99	56.425	Loxodonta_africana
YPL211W	-	99	56.425	ENSMFAG00000046374	NIP7	99	56.425	Macaca_fascicularis
YPL211W	-	99	52.514	ENSMFAG00000013965	-	99	52.514	Macaca_fascicularis
YPL211W	-	84	44.079	ENSMFAG00000002077	-	100	44.079	Macaca_fascicularis
YPL211W	-	99	53.073	ENSMMUG00000046403	-	99	53.073	Macaca_mulatta
YPL211W	-	99	41.341	ENSMMUG00000043208	-	79	41.341	Macaca_mulatta
YPL211W	-	99	56.425	ENSMNEG00000037905	NIP7	99	56.425	Macaca_nemestrina
YPL211W	-	96	48.023	ENSMLEG00000037105	-	96	48.023	Mandrillus_leucophaeus
YPL211W	-	99	56.425	ENSMLEG00000042389	NIP7	99	56.425	Mandrillus_leucophaeus
YPL211W	-	84	44.079	ENSMLEG00000030257	-	100	44.079	Mandrillus_leucophaeus
YPL211W	-	99	56.983	ENSMAMG00000020375	nip7	99	56.983	Mastacembelus_armatus
YPL211W	-	99	57.542	ENSMZEG00005009767	nip7	99	57.542	Maylandia_zebra
YPL211W	-	88	54.375	ENSMGAG00000008556	NIP7	99	54.375	Meleagris_gallopavo
YPL211W	-	99	56.983	ENSMAUG00000019255	Nip7	99	56.983	Mesocricetus_auratus
YPL211W	-	99	57.542	ENSMICG00000009664	NIP7	99	57.542	Microcebus_murinus
YPL211W	-	99	56.983	ENSMOCG00000020110	Nip7	99	56.983	Microtus_ochrogaster
YPL211W	-	99	50.838	ENSMMOG00000000657	nip7	99	50.838	Mola_mola
YPL211W	-	99	58.101	ENSMODG00000002782	NIP7	99	58.101	Monodelphis_domestica
YPL211W	-	99	56.425	ENSMALG00000008166	nip7	99	56.425	Monopterus_albus
YPL211W	-	99	56.425	MGP_CAROLIEiJ_G0031530	Nip7	99	56.425	Mus_caroli
YPL211W	-	99	56.425	ENSMUSG00000031917	Nip7	99	56.425	Mus_musculus
YPL211W	-	99	56.983	MGP_PahariEiJ_G0023130	Nip7	99	56.983	Mus_pahari
YPL211W	-	99	56.425	MGP_SPRETEiJ_G0032648	Nip7	99	56.425	Mus_spretus
YPL211W	-	99	57.542	ENSMLUG00000011835	NIP7	99	57.542	Myotis_lucifugus
YPL211W	-	99	58.101	ENSNGAG00000006098	Nip7	99	58.101	Nannospalax_galili
YPL211W	-	93	47.024	ENSNGAG00000012129	-	85	47.024	Nannospalax_galili
YPL211W	-	99	57.542	ENSNBRG00000001950	nip7	99	57.542	Neolamprologus_brichardi
YPL211W	-	99	56.983	ENSNLEG00000005492	NIP7	99	56.983	Nomascus_leucogenys
YPL211W	-	99	55.866	ENSMEUG00000002818	NIP7	99	55.866	Notamacropus_eugenii
YPL211W	-	99	56.425	ENSOPRG00000006981	NIP7	99	56.425	Ochotona_princeps
YPL211W	-	99	51.397	ENSODEG00000000559	-	99	51.397	Octodon_degus
YPL211W	-	99	56.983	ENSODEG00000014849	-	99	56.983	Octodon_degus
YPL211W	-	99	57.542	ENSONIG00000017181	nip7	99	57.542	Oreochromis_niloticus
YPL211W	-	99	56.983	ENSOCUG00000017652	NIP7	99	56.983	Oryctolagus_cuniculus
YPL211W	-	99	56.983	ENSORLG00000011734	nip7	99	56.983	Oryzias_latipes
YPL211W	-	99	56.983	ENSORLG00020002338	nip7	99	56.983	Oryzias_latipes_hni
YPL211W	-	99	56.983	ENSORLG00015001005	nip7	99	56.983	Oryzias_latipes_hsok
YPL211W	-	99	56.425	ENSOMEG00000011688	nip7	99	56.425	Oryzias_melastigma
YPL211W	-	99	56.425	ENSOGAG00000008066	NIP7	99	56.425	Otolemur_garnettii
YPL211W	-	99	58.659	ENSOARG00000003558	NIP7	99	58.659	Ovis_aries
YPL211W	-	99	45.810	ENSPPAG00000006091	-	99	45.810	Pan_paniscus
YPL211W	-	99	56.983	ENSPPAG00000000218	NIP7	99	56.983	Pan_paniscus
YPL211W	-	99	58.101	ENSPPRG00000009719	NIP7	99	58.101	Panthera_pardus
YPL211W	-	99	58.101	ENSPTIG00000010113	NIP7	99	58.101	Panthera_tigris_altaica
YPL211W	-	99	45.810	ENSPTRG00000051330	-	99	45.810	Pan_troglodytes
YPL211W	-	99	56.983	ENSPTRG00000051089	NIP7	99	56.983	Pan_troglodytes
YPL211W	-	99	41.341	ENSPANG00000029979	-	79	41.341	Papio_anubis
YPL211W	-	99	44.693	ENSPANG00000035982	-	99	44.693	Papio_anubis
YPL211W	-	99	56.425	ENSPANG00000033665	-	99	56.425	Papio_anubis
YPL211W	-	99	56.425	ENSPKIG00000020345	nip7	76	56.425	Paramormyrops_kingsleyae
YPL211W	-	88	57.500	ENSPSIG00000011210	NIP7	98	57.500	Pelodiscus_sinensis
YPL211W	-	99	56.983	ENSPEMG00000011304	Nip7	99	56.983	Peromyscus_maniculatus_bairdii
YPL211W	-	99	57.542	ENSPCIG00000012768	NIP7	99	57.542	Phascolarctos_cinereus
YPL211W	-	99	56.983	ENSPFOG00000014985	nip7	99	56.983	Poecilia_formosa
YPL211W	-	99	56.983	ENSPLAG00000005031	nip7	99	56.983	Poecilia_latipinna
YPL211W	-	99	56.983	ENSPMEG00000008213	nip7	99	56.983	Poecilia_mexicana
YPL211W	-	99	56.983	ENSPPYG00000007503	NIP7	99	56.983	Pongo_abelii
YPL211W	-	99	58.101	ENSPCOG00000011060	NIP7	99	58.101	Propithecus_coquereli
YPL211W	-	99	56.983	ENSPVAG00000015980	NIP7	99	56.983	Pteropus_vampyrus
YPL211W	-	99	57.542	ENSPNYG00000018316	nip7	99	57.542	Pundamilia_nyererei
YPL211W	-	99	57.542	ENSPNAG00000027680	nip7	99	49.162	Pygocentrus_nattereri
YPL211W	-	99	57.542	ENSRNOG00000020391	Nip7	99	57.542	Rattus_norvegicus
YPL211W	-	94	49.123	ENSRBIG00000033803	-	98	49.123	Rhinopithecus_bieti
YPL211W	-	94	54.971	ENSRBIG00000039934	-	100	54.971	Rhinopithecus_bieti
YPL211W	-	99	56.983	ENSRROG00000026840	NIP7	99	56.983	Rhinopithecus_roxellana
YPL211W	-	99	38.547	ENSRROG00000044739	-	78	38.547	Rhinopithecus_roxellana
YPL211W	-	99	57.542	ENSSBOG00000027548	NIP7	99	57.542	Saimiri_boliviensis_boliviensis
YPL211W	-	99	58.101	ENSSFOG00015008579	nip7	99	58.101	Scleropages_formosus
YPL211W	-	99	55.866	ENSSMAG00000006217	nip7	99	55.866	Scophthalmus_maximus
YPL211W	-	99	56.983	ENSSDUG00000002698	nip7	99	56.983	Seriola_dumerili
YPL211W	-	99	56.983	ENSSLDG00000005153	nip7	99	56.983	Seriola_lalandi_dorsalis
YPL211W	-	99	56.983	ENSSARG00000000303	NIP7	99	56.983	Sorex_araneus
YPL211W	-	99	57.542	ENSSPUG00000005858	NIP7	99	57.542	Sphenodon_punctatus
YPL211W	-	99	56.983	ENSSPAG00000017699	nip7	99	56.983	Stegastes_partitus
YPL211W	-	99	58.101	ENSSSCG00000033741	NIP7	99	58.101	Sus_scrofa
YPL211W	-	99	54.190	ENSTGUG00000008073	NIP7	99	54.190	Taeniopygia_guttata
YPL211W	-	99	56.983	ENSTRUG00000020267	nip7	99	56.983	Takifugu_rubripes
YPL211W	-	99	57.542	ENSTNIG00000004660	nip7	99	57.542	Tetraodon_nigroviridis
YPL211W	-	99	57.542	ENSTTRG00000010012	NIP7	99	57.542	Tursiops_truncatus
YPL211W	-	99	58.101	ENSUAMG00000022688	NIP7	99	58.101	Ursus_americanus
YPL211W	-	99	58.101	ENSUMAG00000018771	NIP7	99	58.101	Ursus_maritimus
YPL211W	-	99	57.542	ENSVPAG00000003991	NIP7	99	57.542	Vicugna_pacos
YPL211W	-	99	47.778	ENSVVUG00000008406	-	99	47.778	Vulpes_vulpes
YPL211W	-	99	56.983	ENSVVUG00000017160	-	99	56.983	Vulpes_vulpes
YPL211W	-	99	58.659	ENSXETG00000017853	nip7	99	58.659	Xenopus_tropicalis
YPL211W	-	99	57.542	ENSXMAG00000025276	nip7	99	57.542	Xiphophorus_maculatus