EuRBPDB

Description

Ensembl ID: YPL218W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 712
Position: chrXVI:138698-139409
Accession: S000006139
RBP type: canonical RBP
Summary: ARF family GTPase%3B component of the COPII vesicle coat%3B required for transport vesicle formation during ER to Golgi protein transport%3B lowers membrane rigidity aiding vesicle formation%3B localizes to ER-mitochondrial contact sites where it enhances membrane curvature%2C thereby reducing contact size via its N-terminal amphipathic helix%3B regulates mitochondrial fission and fusion dynamics

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YPL218W_mRNA	MMR_HSR1	PF01926.23	2.7e-06	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YPL218W_mRNA	-	573	-	YPL218W_mRNA	190 (aa)	-	P20606

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YPL218W	-	88	34.731	YDL137W	-	88	34.731
YPL218W	-	88	30.114	YPL051W	-	86	30.114
YPL218W	-	97	34.239	YDL192W	-	98	34.239

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YPL218W	-	98	57.812	WBGene00022678	sar-1	98	57.812	Caenorhabditis_elegans
YPL218W	-	98	59.686	ENSCING00000005807	-	99	59.686	Ciona_intestinalis