EuRBPDB

Description

Ensembl ID: YPL249C-A (Gene tree)
Gene ID: -
Gene Symbol: RPL36B
Alias: -
Full Name: Ribosomal 60S subunit protein L36B%3B binds to 5.8 S rRNA%3B homologous to mammalian ribosomal protein L36%2C no bacterial homolog%3B RPL36B has a paralog%2C RPL36A%2C that arose from the whole genome duplication
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 541 bases
Position: chrXVI:75699-76239
Accession: S000006438
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YPL249C-A_mRNA	Ribosomal_L36e	PF01158.18	2.2e-37	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YPL249C-A_mRNA	-	303	-	YPL249C-A_mRNA	100 (aa)	-	O14455

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YPL249C-A	RPL36B	100	98.000	YMR194W	RPL36A	100	98.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YPL249C-A	RPL36B	94	50.000	WBGene00004450	rpl-36	90	50.000	Caenorhabditis_elegans
YPL249C-A	RPL36B	93	49.462	ENSCING00000012007	-	95	49.462	Ciona_intestinalis
YPL249C-A	RPL36B	99	49.495	ENSCSAVG00000005153	-	96	49.495	Ciona_savignyi
YPL249C-A	RPL36B	99	42.202	FBgn0002579	RpL36	95	42.202	Drosophila_melanogaster
YPL249C-A	RPL36B	95	49.474	ENSSLDG00000002939	-	83	49.474	Seriola_lalandi_dorsalis