EuRBPDB

Description

Ensembl ID: YPR043W (Gene tree)
Gene ID: -
Gene Symbol: RPL43A
Alias: -
Full Name: Ribosomal 60S subunit protein L43A%3B null mutation confers a dominant lethal phenotype%3B homologous to mammalian ribosomal protein L37A%2C no bacterial homolog%3B RPL43A has a paralog%2C RPL43B%2C that arose from the whole genome duplication
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 682 bases
Position: chrXVI:654166-654847
Accession: S000006247
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YPR043W_mRNA	Ribosomal_L37ae	PF01780.19	8.3e-40	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YPR043W_mRNA	-	279	-	YPR043W_mRNA	92 (aa)	-	P0CX25

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YPR043W	RPL43A	100	100.000	YJR094W-A	RPL43B	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YPR043W	RPL43A	99	69.231	WBGene00004456	rpl-43	100	69.231	Caenorhabditis_elegans
YPR043W	RPL43A	88	54.545	ENSCAFG00020027145	-	88	54.545	Canis_lupus_dingo
YPR043W	RPL43A	99	54.945	ENSCING00000013022	-	100	54.945	Ciona_intestinalis
YPR043W	RPL43A	99	68.132	FBgn0261608	RpL37A	99	68.132	Drosophila_melanogaster
YPR043W	RPL43A	50	73.913	ENSVVUG00000007642	-	60	73.913	Vulpes_vulpes