EuRBPDB

Description

Ensembl ID: YPR072W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Component of the CCR4-NOT core complex%2C involved in mRNA decapping%3B involved intranscription initiation and elongation and in mRNA degradation%3B conserved lysine in human homolog of Not5p and Not3p is mutated in cancers
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 1683 bases
Position: chrXVI:690107-691789
Accession: S000006276
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YPR072W_mRNA	Not3	PF04065.15	6.6e-68	1	1
YPR072W_mRNA	NOT2_3_5	PF04153.18	3.8e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YPR072W_mRNA	-	1683	-	YPR072W_mRNA	560 (aa)	-	Q12514

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YPR072W	-	54	38.235	ENSG00000088038	CNOT3	98	39.691	Homo_sapiens
YPR072W	-	53	39.827	ENSACIG00000003652	cnot3b	64	35.216	Amphilophus_citrinellus
YPR072W	-	51	40.343	ENSCSEG00000016892	cnot3b	54	34.615	Cynoglossus_semilaevis
YPR072W	-	53	38.627	ENSMMUG00000009698	CNOT3	82	32.184	Macaca_mulatta
YPR072W	-	53	37.339	ENSMMOG00000013086	cnot3b	64	32.941	Mola_mola
YPR072W	-	54	38.235	MGP_CAROLIEiJ_G0029095	Cnot3	97	55.000	Mus_caroli
YPR072W	-	54	38.235	ENSMUSG00000035632	Cnot3	97	55.000	Mus_musculus
YPR072W	-	54	38.235	MGP_PahariEiJ_G0020964	Cnot3	97	55.000	Mus_pahari
YPR072W	-	54	38.235	MGP_SPRETEiJ_G0030148	Cnot3	97	55.000	Mus_spretus
YPR072W	-	54	36.134	ENSNBRG00000003336	cnot3b	58	32.941	Neolamprologus_brichardi
YPR072W	-	55	37.705	ENSPTIG00000008781	CNOT3	72	33.529	Panthera_tigris_altaica
YPR072W	-	55	37.705	ENSPCIG00000023018	CNOT3	76	34.426	Phascolarctos_cinereus
YPR072W	-	55	39.506	ENSPNYG00000003358	cnot3b	53	33.750	Pundamilia_nyererei
YPR072W	-	54	38.934	ENSXCOG00000019460	cnot3a	53	39.914	Xiphophorus_couchianus