EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YPR118W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: 5'-methylthioribose-1-phosphate isomerase%3B catalyzes the isomerization of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate in the methionine salvage pathway
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 1236 bases
Position: chrXVI:767752-768987
Accession: S000006322
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YPR118W_mRNA	IF-2B	PF01008.17	1.8e-98	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YPR118W_mRNA	-	1236	-	YPR118W_mRNA	411 (aa)	-	Q06489

Gene Model

Click here to download YPR118W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YPR118W's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YPR118W	-	97	41.191	ENSG00000037757	MRI1	93	41.935	Homo_sapiens
YPR118W	-	97	42.079	ENSAPOG00000009673	mri1	95	42.079	Acanthochromis_polyacanthus
YPR118W	-	97	39.066	ENSAMEG00000012918	MRI1	96	39.563	Ailuropoda_melanoleuca
YPR118W	-	97	42.145	ENSACIG00000009199	mri1	95	42.145	Amphilophus_citrinellus
YPR118W	-	97	42.145	ENSAOCG00000009931	mri1	95	42.145	Amphiprion_ocellaris
YPR118W	-	97	42.145	ENSAPEG00000013553	mri1	95	42.145	Amphiprion_percula
YPR118W	-	97	41.895	ENSATEG00000019410	mri1	95	41.895	Anabas_testudineus
YPR118W	-	97	43.424	ENSACAG00000003475	MRI1	96	43.424	Anolis_carolinensis
YPR118W	-	97	38.213	ENSANAG00000035382	-	95	38.213	Aotus_nancymaae
YPR118W	-	97	41.935	ENSANAG00000020896	-	94	41.832	Aotus_nancymaae
YPR118W	-	97	42.145	ENSACLG00000020412	mri1	95	42.145	Astatotilapia_calliptera
YPR118W	-	97	41.397	ENSAMXG00000011982	mri1	95	41.397	Astyanax_mexicanus
YPR118W	-	97	40.347	ENSBTAG00000002524	MRI1	87	41.089	Bos_taurus
YPR118W	-	95	39.500	WBGene00007236	C01G10.9	93	39.500	Caenorhabditis_elegans
YPR118W	-	97	41.935	ENSCJAG00000044187	MRI1	92	41.832	Callithrix_jacchus
YPR118W	-	97	40.594	ENSCAFG00000016615	MRI1	96	41.363	Canis_familiaris
YPR118W	-	97	40.594	ENSCAFG00020006659	MRI1	96	41.363	Canis_lupus_dingo
YPR118W	-	97	39.951	ENSCHIG00000019343	MRI1	95	40.686	Capra_hircus
YPR118W	-	62	41.634	ENSTSYG00000034486	MRI1	86	41.634	Carlito_syrichta
YPR118W	-	63	48.276	ENSCAPG00000015487	MRI1	92	48.276	Cavia_aperea
YPR118W	-	97	42.822	ENSCPOG00000013191	MRI1	95	42.822	Cavia_porcellus
YPR118W	-	97	42.184	ENSCCAG00000014292	-	92	42.079	Cebus_capucinus
YPR118W	-	97	38.693	ENSCCAG00000035484	-	95	38.693	Cebus_capucinus
YPR118W	-	71	68.750	ENSCATG00000029747	MRI1	82	66.667	Cercocebus_atys
YPR118W	-	97	41.584	ENSCLAG00000013025	MRI1	95	41.606	Chinchilla_lanigera
YPR118W	-	97	40.342	ENSCSAG00000006463	MRI1	94	41.463	Chlorocebus_sabaeus
YPR118W	-	54	39.207	ENSCING00000000162	-	99	39.207	Ciona_intestinalis
YPR118W	-	99	41.809	ENSCSAVG00000003107	-	99	41.809	Ciona_savignyi
YPR118W	-	85	42.017	ENSCANG00000043216	MRI1	85	51.479	Colobus_angolensis_palliatus
YPR118W	-	97	40.441	ENSCGRG00001015655	MRI1	93	40.441	Cricetulus_griseus_chok1gshd
YPR118W	-	97	40.441	ENSCGRG00000005697	MRI1	93	40.441	Cricetulus_griseus_crigri
YPR118W	-	97	41.584	ENSCSEG00000011410	mri1	95	41.584	Cynoglossus_semilaevis
YPR118W	-	97	41.646	ENSCVAG00000023215	mri1	95	41.646	Cyprinodon_variegatus
YPR118W	-	97	41.397	ENSDARG00000075754	mri1	95	41.397	Danio_rerio
YPR118W	-	97	40.750	ENSDNOG00000047045	MRI1	96	41.687	Dasypus_novemcinctus
YPR118W	-	97	40.842	ENSDORG00000010875	Mri1	95	41.337	Dipodomys_ordii
YPR118W	-	97	41.769	FBgn0039849	CG11334	96	41.769	Drosophila_melanogaster
YPR118W	-	84	40.000	ENSETEG00000017174	MRI1	99	40.678	Echinops_telfairi
YPR118W	-	97	36.973	ENSEBUG00000014184	mri1	96	36.973	Eptatretus_burgeri
YPR118W	-	97	39.851	ENSEASG00005000151	MRI1	96	40.842	Equus_asinus_asinus
YPR118W	-	97	39.851	ENSECAG00000010706	MRI1	96	41.089	Equus_caballus
YPR118W	-	97	38.191	ENSELUG00000016174	mri1	95	38.693	Esox_lucius
YPR118W	-	98	38.200	ENSFCAG00000011508	MRI1	99	39.173	Felis_catus
YPR118W	-	64	45.489	ENSFDAG00000017424	MRI1	85	45.185	Fukomys_damarensis
YPR118W	-	97	41.895	ENSFHEG00000009358	MRI1	95	41.895	Fundulus_heteroclitus
YPR118W	-	91	39.267	ENSGMOG00000002273	mri1	94	39.267	Gadus_morhua
YPR118W	-	91	36.316	ENSGALG00000034575	MRI1	94	36.316	Gallus_gallus
YPR118W	-	97	42.574	ENSGAFG00000010575	mri1	95	42.574	Gambusia_affinis
YPR118W	-	91	41.885	ENSGACG00000018995	mri1	96	41.885	Gasterosteus_aculeatus
YPR118W	-	97	40.695	ENSGAGG00000010411	MRI1	96	40.695	Gopherus_agassizii
YPR118W	-	97	40.943	ENSGGOG00000006628	MRI1	93	41.687	Gorilla_gorilla
YPR118W	-	97	42.145	ENSHBUG00000018620	mri1	95	42.145	Haplochromis_burtoni
YPR118W	-	97	41.089	ENSHGLG00000010969	MRI1	95	40.931	Heterocephalus_glaber_female
YPR118W	-	97	40.852	ENSHGLG00100007151	MRI1	95	40.695	Heterocephalus_glaber_male
YPR118W	-	97	41.895	ENSHCOG00000014695	mri1	95	41.895	Hippocampus_comes
YPR118W	-	97	41.646	ENSIPUG00000008756	mri1	95	41.646	Ictalurus_punctatus
YPR118W	-	97	40.786	ENSSTOG00000020750	MRI1	95	40.786	Ictidomys_tridecemlineatus
YPR118W	-	97	40.943	ENSJJAG00000018104	Mri1	93	40.633	Jaculus_jaculus
YPR118W	-	97	41.895	ENSKMAG00000018700	mri1	95	41.895	Kryptolebias_marmoratus
YPR118W	-	97	42.145	ENSLBEG00000004998	mri1	95	42.145	Labrus_bergylta
YPR118W	-	97	41.565	ENSLACG00000006845	MRI1	96	41.565	Latimeria_chalumnae
YPR118W	-	74	41.853	ENSLAFG00000012910	MRI1	85	41.853	Loxodonta_africana
YPR118W	-	84	40.857	ENSMFAG00000044250	MRI1	99	42.286	Macaca_fascicularis
YPR118W	-	97	41.191	ENSMMUG00000018068	MRI1	93	41.832	Macaca_mulatta
YPR118W	-	97	41.191	ENSMNEG00000002628	MRI1	86	42.327	Macaca_nemestrina
YPR118W	-	97	40.943	ENSMLEG00000035138	MRI1	93	41.584	Mandrillus_leucophaeus
YPR118W	-	97	42.327	ENSMAMG00000011686	mri1	95	42.327	Mastacembelus_armatus
YPR118W	-	97	42.145	ENSMZEG00005007657	mri1	95	42.145	Maylandia_zebra
YPR118W	-	97	39.702	ENSMICG00000031875	MRI1	93	40.196	Microcebus_murinus
YPR118W	-	97	40.594	ENSMOCG00000009591	Mri1	93	40.594	Microtus_ochrogaster
YPR118W	-	97	42.145	ENSMMOG00000021373	mri1	66	42.145	Mola_mola
YPR118W	-	97	40.842	ENSMODG00000011870	MRI1	97	40.842	Monodelphis_domestica
YPR118W	-	97	42.327	ENSMALG00000006021	mri1	95	42.327	Monopterus_albus
YPR118W	-	97	38.971	MGP_CAROLIEiJ_G0031299	Mri1	93	39.706	Mus_caroli
YPR118W	-	97	39.066	ENSMUSG00000004996	Mri1	93	39.706	Mus_musculus
YPR118W	-	97	39.461	MGP_PahariEiJ_G0022905	Mri1	93	40.196	Mus_pahari
YPR118W	-	97	39.066	MGP_SPRETEiJ_G0032417	Mri1	93	39.706	Mus_spretus
YPR118W	-	97	40.786	ENSMPUG00000003316	MRI1	96	41.606	Mustela_putorius_furo
YPR118W	-	96	41.379	ENSMLUG00000004766	MRI1	96	42.118	Myotis_lucifugus
YPR118W	-	97	41.337	ENSNGAG00000022102	Mri1	95	41.337	Nannospalax_galili
YPR118W	-	97	39.109	ENSNBRG00000023766	mri1	95	39.109	Neolamprologus_brichardi
YPR118W	-	97	41.191	ENSNLEG00000013138	MRI1	87	52.071	Nomascus_leucogenys
YPR118W	-	77	47.581	ENSMEUG00000013717	MRI1	78	47.581	Notamacropus_eugenii
YPR118W	-	60	47.200	ENSOPRG00000015475	-	95	47.200	Ochotona_princeps
YPR118W	-	97	41.089	ENSODEG00000019755	-	94	41.119	Octodon_degus
YPR118W	-	97	41.337	ENSODEG00000010083	-	94	41.363	Octodon_degus
YPR118W	-	97	42.145	ENSONIG00000017732	mri1	95	42.145	Oreochromis_niloticus
YPR118W	-	86	41.899	ENSOANG00000012399	MRI1	94	41.899	Ornithorhynchus_anatinus
YPR118W	-	97	39.851	ENSOCUG00000024840	MRI1	95	40.594	Oryctolagus_cuniculus
YPR118W	-	97	42.079	ENSORLG00000011911	mri1	95	42.079	Oryzias_latipes
YPR118W	-	97	42.079	ENSORLG00020005135	MRI1	95	42.079	Oryzias_latipes_hni
YPR118W	-	97	42.079	ENSORLG00015003701	MRI1	95	42.079	Oryzias_latipes_hsok
YPR118W	-	83	42.241	ENSOMEG00000013120	mri1	94	42.241	Oryzias_melastigma
YPR118W	-	97	42.054	ENSOGAG00000007183	MRI1	95	42.054	Otolemur_garnettii
YPR118W	-	97	36.473	ENSOARG00000008222	MRI1	94	36.473	Ovis_aries
YPR118W	-	74	43.042	ENSPPAG00000033346	MRI1	80	43.042	Pan_paniscus
YPR118W	-	97	40.943	ENSPPRG00000006539	MRI1	94	41.667	Panthera_pardus
YPR118W	-	97	40.695	ENSPTIG00000005216	MRI1	96	41.422	Panthera_tigris_altaica
YPR118W	-	97	40.943	ENSPTRG00000010563	MRI1	93	41.687	Pan_troglodytes
YPR118W	-	97	40.943	ENSPANG00000010977	MRI1	93	41.584	Papio_anubis
YPR118W	-	97	38.191	ENSPKIG00000003387	mri1	95	38.191	Paramormyrops_kingsleyae
YPR118W	-	97	42.079	ENSPMGG00000016429	mri1	95	42.079	Periophthalmus_magnuspinnatus
YPR118W	-	97	39.702	ENSPEMG00000006105	Mri1	94	40.347	Peromyscus_maniculatus_bairdii
YPR118W	-	97	42.680	ENSPMAG00000006128	mri1	96	42.680	Petromyzon_marinus
YPR118W	-	97	41.832	ENSPCIG00000019032	MRI1	96	41.832	Phascolarctos_cinereus
YPR118W	-	97	42.643	ENSPFOG00000004311	mri1	95	42.643	Poecilia_formosa
YPR118W	-	97	41.895	ENSPLAG00000010852	mri1	95	41.895	Poecilia_latipinna
YPR118W	-	97	42.643	ENSPMEG00000014113	mri1	95	42.643	Poecilia_mexicana
YPR118W	-	79	40.719	ENSPREG00000000422	mri1	86	40.719	Poecilia_reticulata
YPR118W	-	97	41.397	ENSPPYG00000010570	MRI1	93	41.397	Pongo_abelii
YPR118W	-	97	41.439	ENSPCAG00000014275	MRI1	95	41.337	Procavia_capensis
YPR118W	-	85	40.960	ENSPCOG00000021500	MRI1	92	41.341	Propithecus_coquereli
YPR118W	-	96	41.147	ENSPVAG00000006322	MRI1	93	41.089	Pteropus_vampyrus
YPR118W	-	97	42.145	ENSPNYG00000001542	mri1	95	42.145	Pundamilia_nyererei
YPR118W	-	97	41.646	ENSPNAG00000012506	mri1	95	41.646	Pygocentrus_nattereri
YPR118W	-	97	40.199	ENSRNOG00000026211	Mri1	93	40.943	Rattus_norvegicus
YPR118W	-	97	40.842	ENSRBIG00000028556	MRI1	87	51.176	Rhinopithecus_bieti
YPR118W	-	97	40.943	ENSRROG00000031188	MRI1	93	42.079	Rhinopithecus_roxellana
YPR118W	-	97	35.572	ENSSBOG00000029825	-	95	35.572	Saimiri_boliviensis_boliviensis
YPR118W	-	85	42.938	ENSSBOG00000034840	-	93	43.175	Saimiri_boliviensis_boliviensis
YPR118W	-	97	41.832	ENSSHAG00000011531	MRI1	96	41.832	Sarcophilus_harrisii
YPR118W	-	85	41.854	ENSSFOG00015018651	mri1	92	41.854	Scleropages_formosus
YPR118W	-	97	42.145	ENSSMAG00000004636	mri1	95	42.145	Scophthalmus_maximus
YPR118W	-	97	42.145	ENSSDUG00000002275	mri1	95	42.145	Seriola_dumerili
YPR118W	-	97	42.145	ENSSLDG00000012900	mri1	95	42.145	Seriola_lalandi_dorsalis
YPR118W	-	97	40.347	ENSSARG00000007904	MRI1	95	41.089	Sorex_araneus
YPR118W	-	70	71.429	ENSSPUG00000002937	MRI1	77	71.429	Sphenodon_punctatus
YPR118W	-	97	42.145	ENSSPAG00000008235	mri1	95	42.145	Stegastes_partitus
YPR118W	-	97	41.832	ENSSSCG00000013756	MRI1	87	41.832	Sus_scrofa
YPR118W	-	97	41.397	ENSTRUG00000010929	mri1	95	41.397	Takifugu_rubripes
YPR118W	-	97	40.399	ENSTNIG00000014065	mri1	96	40.399	Tetraodon_nigroviridis
YPR118W	-	58	50.888	ENSTBEG00000008620	MRI1	68	50.289	Tupaia_belangeri
YPR118W	-	97	40.099	ENSTTRG00000010347	MRI1	95	40.842	Tursiops_truncatus
YPR118W	-	97	40.786	ENSUAMG00000015405	MRI1	96	41.363	Ursus_americanus
YPR118W	-	97	40.295	ENSUMAG00000004743	MRI1	96	41.032	Ursus_maritimus
YPR118W	-	54	77.778	ENSVPAG00000011144	-	57	75.000	Vicugna_pacos
YPR118W	-	97	40.842	ENSVVUG00000026734	MRI1	88	41.606	Vulpes_vulpes
YPR118W	-	97	42.469	ENSXETG00000021867	mri1	96	42.469	Xenopus_tropicalis
YPR118W	-	85	43.099	ENSXCOG00000014431	mri1	88	43.099	Xiphophorus_couchianus
YPR118W	-	97	42.822	ENSXMAG00000027505	MRI1	95	42.822	Xiphophorus_maculatus