EuRBPDB

Description

Ensembl ID: YPR129W (Gene tree)
Gene ID: -
Gene Symbol: SCD6
Alias: LSM13
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 1050
Position: chrXVI:792687-793736
Accession: S000006333
RBP type: canonical RBP
Summary: Repressor of translation initiation%3B binds eIF4G through its RGG domain and inhibits recruitment of the preinitiation complex%3B also contains an Lsm domain%3B may have a role in RNA processing%3B overproduction suppresses null mutation in clathrin heavy chain gene CHC1%3B forms cytoplasmic foci upon DNA replication stress

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YPR129W_mRNA	LSM14	PF12701.7	5.9e-26	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
20844764	Proteome-wide search reveals unexpected RNA binding proteins in Saccharomyces cerevisiae	BioRadArray & yeast	2010 Sep 10	Tsvetanova NG	DOI: 10.1371/journal.pone.0012671
20844764	Proteome-wide search reveals unexpected RNA binding proteins in Saccharomyces cerevisiae	MS & yeast	2010 Sep 10	Tsvetanova NG	DOI: 10.1371/journal.pone.0012671

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YPR129W_mRNA	-	1050	-	YPR129W_mRNA	349 (aa)	-	P45978

Gene Model

Protein-Protein Interaction (PPI)