Gambusia_affinisFamily: Tudor-knot Number of Genes: 5
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
kat5b
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-
-
-
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kat8
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morf4l1
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Introduction

Pfam

This is a novel knotted tudor domain which is required for binding to RNA. The know influences the loop conformation of the helical turn Ht2 - residues 61-6 3- that is located at the side opposite the knot in the tudor domain-chromodomain; stabilisation of Ht2 is essential for RNA binding [1].

InterPro

This is a novel knotted tudor domain which is required for binding to RNA. The knot influences the loop conformation of the helical turn Ht2 (residues 61-63) that is located at the side opposite the knot in the tudor domain-chromo domain; stabilisation of Ht2 is essential for RNA binding [PUBMED:18407291].

Reference

  1. Shimojo H, Sano N, Moriwaki Y, Okuda M, Horikoshi M, Nishimura Y; , J Mol Biol. 2008;378:987-1001.: Novel structural and functional mode of a knot essential for RNA binding activity of the Esa1 presumed chromodomain. PUBMED:18407291 EPMC:18407291.