Anabas_testudineusFamily: KH_1 Number of Genes: 44
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
igf2bp3
sf1
ankhd1
qki2
akap1b
khdrbs1a
-
NOVA1
-
khdrbs1b
pcbp4
-
bicc1a
igf2bp1
-
bicc2
-
hdlbpa
-
KHDRBS3
PNPT1
zgc:110045
-
qkia
mex3b
ddx43
hnrpkl
-
hnrnpk
-
MEX3D
-
nova1
-
fmr1
fubp3
fubp1
pcbp2
khsrp
fxr2
hdlbpb
igf2bp2b
khdrbs2
fxr1
qkib
ascc1
tdrkh
KHSRP
PCBP2 (1 of many)

Introduction

Pfam

KH motifs bind RNA in vitro. Autoantibodies to Nova, a KH domain protein, cause paraneoplastic opsoclonus ataxia.

InterPro

The K homology (KH) domain was first identified in the human heterogeneous nuclear ribonucleoprotein (hnRNP) K. It is a domain of around 70 amino acids that is present in a wide variety of quite diverse nucleic acid-binding proteins [PUBMED:8036511]. It has been shown to bind RNA [PUBMED:9302998, PUBMED:10369774]. Like many other RNA-binding motifs, KH motifs are found in one or multiple copies (14 copies in chicken vigilin) and, at least for hnRNP K (three copies) and FMR-1 (two copies), each motif is necessary for in vitro RNA binding activity, suggesting that they may function cooperatively or, in the case of single KH motif proteins (for example, Mer1p), independently [PUBMED:8036511].

Reference

  1. Burd CG, Dreyfuss G; , Science 1994;265:615-621.: Conserved structures and diversity of functions of RNA-binding proteins. PUBMED:8036511 EPMC:8036511 .

  2. Musco G, Stier G, Joseph C, Castiglione Morelli MA, Nilges M, Gibson TJ, Pastore A; , Cell 1996;85:237-245.: Three-dimensional structure and stability of the KH domain: molecular insights into the fragile X syndrome. PUBMED:8612276 EPMC:8612276.