Canis_familiarisFamily: MMR_HSR1 Number of Genes: 110
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
RAB5B
GNL1
-
-
IFGGC1
SEPT8
-
SEPT3
-
-
RASEF
ARF5
GUF1
GTPBP10
RASL11B
-
NOA1
EIF5B
ARL4A
RAB23
MTIF2
RAB1A
SEPT7
GNL2
RAB14
EHD2
DNAJC27
RAB7A
ARL5B
GIMAP8
GIMAP7
-
GIMAP4
RAB30
IRGC
-
RHEB
-
SEPT9
-
EHD3
GTPBP4
ARL8B
RAB2B
ARL5A
RAB5A
-
-
RASL11A
ARL1
RAB2A
NUGGC
WNT10B
GNL3
ARL6
NRAS
EHD4
ARL3
-
GTPBP8
GTPBP6
RABL3
MFN1
KRAS
RAB9A
ARL4C
MTG2
-
RERG
RAB1B
SEPT2
OLA1
LSG1
RAB36
TYSND1
EHD1
-
SEPT5
ARL4D
GTPBP3
-
CRACR2A
RAB5C
GNL3L
MFN2
ARL5C
SEPT1
ARL10
RAB25
RAB11A
SEPT4
RAB9B
DRG2
RAB31
RAB33A
RAB34
ERAL1
EEF2
SEPT12
SRL
RAB39B
-
-
ARL2-SNX15
-
-
RAB6A
-
ARF4
-
-
-
ARFRP1
GIMD1
HRAS
-
-
-
SAR1B
RAB11B
GIMAP2
NKIRAS2
DRG1

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.