Microtus_ochrogasterFamily: MMR_HSR1 Number of Genes: 130
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
-
Arl5c
Rab23
Rab12
Sept6
Gimap4
Rasl11a
Hras
Rasef
Rab6b
Arl4d
Gtpbp4
-
Rab7
-
-
Rabl2
Arfrp1
-
Rab14
Arl14
-
-
Rab36
Noa1
Drg1
Arf1
Gimap8
Arl1
Arl13a
-
Arl4c
Rab17
Arl11
-
-
-
Rab39b
Ehd2
Gimap1
Nkiras2
-
-
Srl
-
Rab5a
Irgm1
-
-
Mtg1
Rab9b
Rragb
Ehd4
Rab25
Kras
Arf2
-
-
Guf1
Arl8a
Irgm2
Rab22a
Mtif2
Ehd3
Irgc1
Rab11b
Sept7
Rab18
-
Rab2b
Arl5b
Rab2a
Igtp
-
Rab6a
Rab1b
-
Sept11
Rab44
-
Gtpbp3
Rabl3
Sept10
Dnajc27
Sept3
Ehd1
Rab9
Arl3
-
Gnl2
-
-
Rab34
Gtpbp8
Rab1a
Sept12
Gtpbp10
Arl10
Gimd1
Eras
Sept1
Eefsec
-
-
Sar1a
Mtg2
Gimap6
-
Gnl3
-
-
-
Mfn2
Arl8b
Rab15
Drg2
Mfn1
-
Sept9
-
-
Arl2
Arl5a
Rab33b
Arl4a
Rab35
-
Rab33a
Arf3
Sept14
Gnl1
Rab11a
Rab13
Gnl3l
Rab42
Gpn1
Lsg1
Rheb
Sept4
Nras
Rasl11b
Arl6
Sept8
Eral1
Arf5

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.