Otolemur_garnettiiFamily: MMR_HSR1 Number of Genes: 116
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
RAB36
NUGGC
EHD3
ARL6
ARL10
MFN1
MTG2
CRACR2A
-
RAB15
-
-
-
GIMAP2
-
-
RAB9A
GTPBP8
RAB11B
LSG1
ARL3
SEPT9
GNL3
MTIF2
-
SEPT2
SEPT4
SAR1A
SEPT11
SRPRB
RAB6B
ARL11
MFN2
RAB23
ARL5C
RABL3
SEPT7
ARL5B
RAB33B
-
GTPBP3
ARL4A
RAB11A
SEPT14
-
RAB7A
RASL11A
GNL2
-
-
-
-
EHD1
RAB5C
RASL11B
EEF2
GTPBP10
-
ARF1
ERAL1
GTPBP6
ARL5A
GTPBP4
ARF4
RASEF
-
RAB14
-
EIF5B
ARF5
SAR1B
SEPT1
GPN1
GUF1
SEPT3
KRAS
RAB31
RAB9B
ARL1
DNAJC27
SEPT8
RAB22A
NOA1
EHD4
OLA1
GNL3L
RAB25
-
NKIRAS2
-
REM1
HRAS
RAB39B
-
-
-
SEPT12
RAB1A
ARFRP1
-
-
-
GIMD1
IRGC
-
ARL8B
-
RAB6A
RAB12
RAB1B
RAB18
RAB21
-
NRAS
-
-
SRL
-
-
ARL4D
GIMAP8
ARL8A
EHD2
RAB30
RAB33A
DRG2
ARL14
-
ARL4C
-

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.