Oreochromis_niloticusFamily: DEAD Number of Genes: 73
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
dhx9
ddx1
ercc6l
-
eif4a1b
ddx31
ddx42
-
dhx58
-
ddx43
-
ddx51
recql
-
dhx16
-
-
dhx36
-
-
ddx39b
ddx52
-
dhx40
-
ddx21
-
ddx6
dhx38
-
cmss1
-
ddx10
dhx29
mtrex
dhx15
ddx18
DDX39A
ddx5
ddx47
-
ifih1
-
polq
-
dhx30
-
smarca5
dicer1
-
hfm1
-
tdrd12
-
eif4a2
snrnp200
ddx61
ddx56
YTHDC2
-
ddx4
ddx20
-
helq
-
ddx59
ddx49
skiv2l
-
-
dhx37
-
DHX15 (1 of many)
ercc6l2
-
blm
-
-
-
ddx55
-
ascc3
zgc:193690
dhx57
ddx23
ddx46
DDX41
ddx39aa
-
DDX5
si:dkey-156n14.5
ddx19
recql5
-
ddx27
recql4
eif4a3
tdrd9
ddx24
-
ddx28

Introduction

Pfam

Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.

InterPro

Proteins with this domain include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.

Reference

  1. de la Cruz J, Kressler D, Linder P; , Trends Biochem Sci 1999;24:192-198.: Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and related families. PUBMED:10322435 EPMC:10322435 .

  2. Aubourg S, Kreis M, Lecharny A; , Nucleic Acids Res 1999;27:628-636.: The DEAD box RNA helicase family in Arabidopsis thaliana. PUBMED:9862990 EPMC:9862990.