Oryzias_melastigmaFamily: DEAD Number of Genes: 74
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
smarca5
dhx37
ddx6
dhx38
ddx51
dhx9
ifih1
ddx46
eif4a1b
ddx54
ddx49
ddx21
ddx31
helq
dhx30
dhx15
eif4a2
tdrd9
-
ddx23
-
-
dhx40
ddx10
rad54l
-
eif4a3
ddx47
ddx5
skiv2l
mtrex
dhx29
DDX5
DDX41
si:dkey-156n14.5
-
DHX15 (1 of many)
dhx33
ddx39aa
ddx4
-
dhx36
snrnp200
ddx28
zgc:158828
cmss1
polq
ddx20
dhx57
YTHDC2
hfm1
ddx52
ddx1
-
ddx18
zgc:193690
dicer1
ddx19
recql5
recql
dhx16
ascc3
ddx42
ddx59
tdrd12
-
ercc6l2
ddx56
-
dhx58 (1 of many)
-
dhx58 (1 of many)
-
ddx24
ddx43
recql4
-
blm
ddx55
ddx27

Introduction

Pfam

Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.

InterPro

Proteins with this domain include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.

Reference

  1. de la Cruz J, Kressler D, Linder P; , Trends Biochem Sci 1999;24:192-198.: Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and related families. PUBMED:10322435 EPMC:10322435 .

  2. Aubourg S, Kreis M, Lecharny A; , Nucleic Acids Res 1999;27:628-636.: The DEAD box RNA helicase family in Arabidopsis thaliana. PUBMED:9862990 EPMC:9862990.