Fundulus_heteroclitusFamily: DEAD Number of Genes: 71
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
eif4a1b
dhx36
dhx40
blm
-
ddx39aa
-
-
snrnp200
eif4a3
-
DDX5
dhx38
ddx19
-
-
ddx27
-
-
smarca5
zgc:193690
ddx55
ddx18
-
ddx1
ddx51
skiv2l
tdrd9
DDX41
ddx31
YTHDC2
dhx57
polq
-
rad54l
-
recql4
-
ddx24
ddx5
ddx43
ddx10
ddx47
cmss1
dhx58
dhx8
ddx28
-
-
-
-
dhx30
recql
-
helq
-
-
-
eif4a2
dicer1
ddx52
ddx23
ddx56 (1 of many)
ddx59
ddx54
dhx37
ddx21
ascc3
recql5
ddx20
ddx4
ddx46
ddx6
dhx16
DHX15 (1 of many)
dhx15
zgc:158828
ifih1
DHX29
mtrex
ddx42

Introduction

Pfam

Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.

InterPro

Proteins with this domain include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.

Reference

  1. de la Cruz J, Kressler D, Linder P; , Trends Biochem Sci 1999;24:192-198.: Unwinding RNA in Saccharomyces cerevisiae: DEAD-box proteins and related families. PUBMED:10322435 EPMC:10322435 .

  2. Aubourg S, Kreis M, Lecharny A; , Nucleic Acids Res 1999;27:628-636.: The DEAD box RNA helicase family in Arabidopsis thaliana. PUBMED:9862990 EPMC:9862990.