Dipodomys_ordiiFamily: MMR_HSR1 Number of Genes: 99
Ensembl IDSymbolEntrez IDRBD RBPome PRIExpresion PathwayPhenotype ParalogOrthologGO
Rabl2
-
Arf5
Gnl3
Srprb
-
Rab35
Rab13
Sept4
Rab1b
Rab25
Mtg2
Arl2
Rab36
-
Sept8
Guf1
Hbs1l
Mtif2
Rab11b
Gpn1
Rab5c
-
-
-
Gtpbp8
-
Rab12
Arl6
Rab9
Mtg1
-
-
Eral1
Sept1
Rab34
-
Sept14
Ehd2
Sept12
Rab2b
Arl3
Eef2
-
-
Arfrp1
-
-
-
Sept3
Gnl2
Arl1
Srl
-
-
Dnajc27
Gtpbp10
-
Sept11
Rasef
Rragb
Rraga
Arl5c
Mfn1
Drg2
Arl11
-
Sar1b
-
-
Rab42
Rab33b
Arl4d
Rab14
Arl8b
Nkiras2
-
-
Rab33a
Ehd3
Arf3
-
Rab2a
Rab5b
Arf2
Nras
Drg1
Rab15
Rasl11a
Gimd1
Rab6b
-
Rab6a
Arl5b
-
Hras
Rab23
Arl4a
Sept9
-
-
Arl4c
-
-
-
-
-
-
Rab39b
Gnl3l
Rasl11b
Ehd1

Introduction

Pfam

The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.

InterPro

Several proteins have recently been shown to contain the 5 structural motifs characteristic of GTP-binding proteins [PUBMED:1449490]. These include murine DRG protein; GTP1 protein from Schizosaccharomyces pombe; OBG protein from Bacillus subtilis [PUBMED:12429099]; ferrous iron transport protein B [PUBMED:20123128] and several others.

Reference

  1. Vernet C, Ribouchon MT, Chimini GPontarotti P; , Mamm Genome 1994;5:100-105.: Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. PUBMED:8180467 EPMC:8180467 .

  2. Bassler J, Kallas M, Hurt E;, J Biol Chem. 2006;281:24737-24744.: The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. PUBMED:16803892 EPMC:16803892 .

  3. Jain N, Dhimole N, Khan AR, De D, Tomar SK, Sajish M, Dutta D, Parrack P, Prakash B;, Biochem Biophys Res Commun. 2009;379:201-205.: E. coli HflX interacts with 50S ribosomal subunits in presence of nucleotides. PUBMED:19109926 EPMC:19109926 .

  4. Dutta D, Bandyopadhyay K, Datta AB, Sardesai AA, Parrack P;, J Bacteriol. 2009;191:2307-2314.: Properties of HflX, an enigmatic protein from Escherichia coli. PUBMED:19181811 EPMC:19181811 .

  5. Shields MJ, Fischer JJ, Wieden HJ;, Biochemistry. 2009;48:10793-10802.: Toward understanding the function of the universally conserved GTPase HflX from Escherichia coli: a kinetic approach. PUBMED:19824612 EPMC:19824612.